LOCUS CN210800 2478 bp mRNA linear EST 07-APR-2004
DEFINITION RJA089G07full RJbrain Gallus gallus cDNA 5' and 3' similar to
Progesterone receptor membrane component 1 (PGRMC1), mRNA sequence.
ACCESSION CN210800
VERSION CN210800.1
DBLINK BioSample: SAMN00174853
KEYWORDS EST.
SOURCE Gallus gallus (chicken)
ORGANISM Gallus gallus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes;
Phasianidae; Phasianinae; Gallus.
REFERENCE 1 (bases 1 to 2478)
AUTHORS Fitzsimmons,C.J., Savolainen,P., Amini,B., Hjalm,G., Lundeberg,J.
and Andersson,L.
TITLE Detection of sequence polymorphisms in red junglefowl and White
Leghorn ESTs
JOURNAL Unpublished
COMMENT Contact: Carolyn Fitzsimmons
Leif Andersson IMBIM/Dept. Animal Breeding and Genetics
Uppsala University/Swedish University of Agricultural Sciences
Box 597, SE-751 24 Uppsala, SWEDEN
Tel: 00 46 (0)18 471 4593
Fax: 00 46 (0)18 471 4833
Email: Carolyn.Fitzsimmons@bmc.uu.se
Seq primer: (5'-end) M13 reverse, (3'-end) M13 universal primer and
T23v (v=A, G and C)
POLYA=Yes.
FEATURES Location/Qualifiers
source 1..2478
/organism="Gallus gallus"
/mol_type="mRNA"
/strain="Red junglefowl"
/db_xref="taxon:9031"
/sex="female"
/clone_lib="SAMN00174853 RJbrain"
/lab_host="ElectroMAX DH10B (Invitrogen)"
/note="Organ: brain; Vector: pSPORT-1; Site_1: Hind III;
Site_2: EcoRI; The cDNA libraries were created with the
Superscript Plasmid System (Invitrogen)."
BASE COUNT 696 a 517 c 582 g 683 t
ORIGIN
1 cacagctcgc cgtgccggag cgcagcggag ccgatggccg ccgaggagcc ggcgatggcg
61 ggcgaggagg cggtggcgac cgaggggggt ggcctgctgc tggagatcgt gggctcgcct
121 ctcaacctga gcctgctggg cctctgcctc ttcctgctct accagatcct gcggggcgag
181 cggcccgcgg cgcagccggg cgaggcgggt ccgccgccgc tgcccaagat gaagcgccgc
241 gacttcacac tggagcagct gcggccctac gacggcgtgc gcgacccgcg gatcctcatg
301 gccgtcaacg ggaaggtgtt cgacgtgacc cgcgccagca agttctacgg gccggatggc
361 ccgtatggga tttttgctgg gagagatgca tcccgaggtc ttgccacttt ctgcctggat
421 aaggaggctc tgagggatga ctatgatgac ctctctgatc tcaacgctac acagcaagag
481 accttgaggg actgggagtc acagttcact tttaagtatc accacgttgg taagctgctg
541 aaggacgggg aggaacccac tgtatactct gatgaagaag agaaagatgc ccaagatgca
601 aagaaagagt agaatgccct gaggagcagt ctatttttgt atcttaaagg atcatttgta
661 acattccact tctgtttcac aagttgcagc agcagcaaca atgcttacaa aaggtccaga
721 cttacattga atcatgtttc tcctaagctt cctcttcaaa ttcagcagta aactagtaca
781 ggtctaatat ctgtcttcct ctgaaagtgc ataataggaa gtatgcacca aaaatgtcag
841 tgcaaaagta aactgcaact ttggcaataa aggactatta ttgtttttat tctgtcacta
901 ttagggttga aatccagacc ttttcactaa caatctaaca ctgcagacac aagcatgaga
961 gtaagtcacg tatgtaacac agattccact gaatttggtt agtgttggct tctgcaggat
1021 ctgggccttg cattgcagtc cctttagaaa agggactgta tttgtccttg aagcatcgta
1081 ctcatttgtg gtgcaatata actcaacatc ttgtcaaata atttggcttt tcaggagcta
1141 aacagggctt acagatgaaa caataactgc ttttaaaaag ccaagagttt ttgagaagtt
1201 agatcacttt tagatactta gaaaataagt aaggactgaa gaatacttga tgtattcagt
1261 cacacagctg catcaatatt ctttgtttac ttctgaagca cctcttaagt gttacttaga
1321 tgctgactgt aactgaacat ccttaaaaac taggttcact gtgaagcgtg acttggtggg
1381 actatcattt gctcacttct cttcttagaa aaactcttca aagaatttta ataaaatgaa
1441 attaaacaag gaaaagcagc tagtgatgat ttttaggcct aaaggaagac ttgctggtgt
1501 gacacgatta acaagtgctc ttgtacaagc aattttaact agcagaaaaa tgtttacggt
1561 caaggtaact tacagaagtt ccctgtacaa aataaataac atggtgtaag ccattgccat
1621 gacgaggctt ttgttgcttt ggaatgttgc tgctaaaaga agtggcagaa tctcatgcac
1681 agccaacaat aggcctgacc gttgaattgc ttttatcttg tttgctctct tactctgtcc
1741 gtaatgactg ggtttgctcc atcgaggtca tccagtctcc taccaaaggg ggctggatat
1801 atggatttga caaaggaaaa atgtgaatat gctccttcat catccaaaat atgtcttcaa
1861 aatttatcag aaattttaag gaggtaacta ctgatttgct gacctcttat aaatgtgctg
1921 acttgtccag gtggttctgc ttgggtgcca gggggtacag ttcccactat ttagtttttc
1981 tggttcggct cttctgctga gttgcttcca gttggcaaca tgaccaaaat ggtgagcgta
2041 gtcctgagtg ggaaggtaca aactaggcaa aattgttcaa aagtggagtg tattgcacaa
2101 caggagcttt cataaacaag ttgacacaac atgttaaagt gcctgagaca tattgcagcg
2161 agaaccaatg actttccatc agtcataaca ctgccatggg gtttttccct gtcagttaca
2221 ctgggccttc aaatgagcag tgcagttgtt tgagccagat tgcttgtata gtgttactgt
2281 gtgaactacc taatgaaggt ctagagacaa ataaaagtct tgtcatgacc tttgtgttgc
2341 tgttttattt ctagagacat ttatactttc tgcaaactac ttctaatggt ttacctcaga
2401 tcagaaatgt gcttttatct gtttaaggca gaaaataaaa gtcttgcata atggtaaaaa
2461 aaaaaaaaaa aaaaaaaa
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