LOCUS AP012164 4615 bp DNA circular BCT 07-OCT-2016
DEFINITION Komagataeibacter medellinensis NBRC 3288 plasmid pGXY050 DNA,
complete sequence.
ACCESSION AP012164
VERSION AP012164.1
DBLINK BioProject:PRJDA64985
BioSample:SAMD00060987
KEYWORDS .
SOURCE Komagataeibacter medellinensis NBRC 3288
ORGANISM Komagataeibacter medellinensis NBRC 3288
Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales;
Acetobacteraceae; Komagataeibacter.
REFERENCE 1 (bases 1 to 4615)
AUTHORS
CONSRTM Gluconacetobacter xylinus genome sequencing consortium
TITLE Direct Submission
JOURNAL Submitted (13-APR-2011) to the DDBJ/EMBL/GenBank databases.
Contact:Director-General Department of Biotechnology
National Institute of Technology and Evaluation, NITE Bioresource
Information Center (NBIC), Department of Biotechnology; 2-49-10
Nishihara, Shibuya-ku, Tokyo 151-0066, Japan
URL :http://www.bio.nite.go.jp/
REFERENCE 2
AUTHORS Ogino,H., Azuma,Y., Hosoyama,A., Nakazawa,H., Matsutani,M.,
Hasegawa,A., Otsuyama,K., Matsushita,K., Fujita,N. and Shirai,M.
TITLE Complete Genome Sequence of NBRC 3288, a Unique
Cellulose-Nonproducing Strain of Gluconacetobacter xylinus
Isolated from Vinegar
JOURNAL J. Bacteriol. 193, 6997-6998 (2011)
COMMENT ##Genome-Assembly-Data-START##
Genome Coverage :: 8x
Sequencing Technology :: Sanger ABI3730
##Genome-Assembly-Data-END##
This work was done by Gluconacetobacter xylinus genome sequencing
consortium
including Department of Microbiology and Immunology, Yamaguchi
University School of Medicine,
National Institute of Technology and Evaluation,
Genetic Resources Technology, Faculty of Agriculture, Kyushu
University,
Department of Biological Chemistry, Faculty of Agriculture,
Yamaguchi University and
Mizkan Group Corporation Central Research Institute.
Please visit our web site.
URL:http://www.bio.nite.go.jp/
DOGAN ; Database of Genomes Analyzed at NITE
The database contains genome sequence data, physical maps
and the genomic and proteomic data of the microorganisms
analyzed.
URL:http://www.bio.nite.go.jp/dogan/Top
FEATURES Location/Qualifiers
source 1..4615
/db_xref="NBRC:3288"
/db_xref="taxon:634177"
/mol_type="genomic DNA"
/organism="Komagataeibacter medellinensis NBRC 3288"
/plasmid="pGXY050"
/strain="NBRC 3288"
CDS 1..948
/codon_start=1
/locus_tag="GLX_31830"
/product="phage DNA recombinase"
/protein_id="BAK85344.1"
/transl_table=11
/translation="MLLTPRCSDPALSEADRERITSYLMASLSPATRAAYATDWQSFT
VWCAEHDVLALQATPAQIASWLSSLAEAGRKASGITRARAALSHAFQGQEHNPVKAPG
VERVMAGIRRTLGTAPTRKQAATAEIVRDMLAHCPSSLSGQRDKALLALGFAGALRRS
ELVALTTDDLLFQERGLLVTIRRSKTDQDGSGQTIGIPNGRRLRPVDAIRSWLAASGI
TQGPVFRSITRHGHLSAQPLSDRSVATIVKTYAHAAGYDPRGFSGHSLRAGFVTSGAQ
TGQDALALARVTRHKNLSVLQTYVRDDAPFLNHPGEAFL"
CDS 1330..1686
/codon_start=1
/locus_tag="GLX_31840"
/product="hypothetical protein"
/protein_id="BAK85345.1"
/transl_table=11
/translation="MTDEPKPWSIRGVHPEVRNAALAAAKREGVTIGEWLDRAIRSHV
KNGRNPTENLSDVPVKQTPDLSDAERLVSMIAQLSEAGAPVPKSVSSKAYALIRDSLK
GVQQQHRAALPSPEQD"
CDS complement(2131..2595)
/codon_start=1
/locus_tag="GLX_31850"
/product="hypothetical protein"
/protein_id="BAK85346.1"
/transl_table=11
/translation="MISGKTHLVLQALASFEGPHGLFPSHEAIAARAGCSARTVIRSL
EKAYLLGLVERTRRRVKRQGRMVSGSNLYRLVLKPLEQAKVAARHYAQQLREALARRK
QRFLQTDIFTAETYSKNINQPYPRHTKDEWLEILTRMQSGQTPQEAGYRGKT"
CDS complement(2928..3314)
/codon_start=1
/locus_tag="GLX_31860"
/product="hypothetical protein"
/protein_id="BAK85347.1"
/transl_table=11
/translation="MKDNSTIEDNRVVTEFLSNKLKEIDSELSRLKKERDVTYGMLRD
LNFGLLKINNINPTEKRIDIKILRSYIIDYLKFRNGKPTKSCFIYDYLNSKYKNLNKS
SFRTHLLKMKKEGLIYPTYKKGYWKI"
CDS complement(3915..4244)
/codon_start=1
/locus_tag="GLX_31870"
/product="hypothetical protein"
/protein_id="BAK85348.1"
/transl_table=11
/translation="MAKLTLADIKRRGGRVDRARVQATTAAEIDQQAREDGTQSDLPG
PAYPSPATVRRQLKLTQTDIAALAGVPVATWRNWEQGRVSLDPAVRTLLRVLWREPDA
VRRAMVA"
BASE COUNT 1059 a 1265 c 1097 g 1194 t
ORIGIN
1 atgcttctga caccgcgctg ttctgacccc gccctctctg aagccgaccg ggaacggatc
61 accagctatc ttatggcgtc tctgtctccg gcgacccgcg ccgcctacgc caccgactgg
121 cagagtttta cggtatggtg tgcagaacat gacgtgcttg ccctccaggc aacaccagct
181 cagatcgcct cctggctctc ctctctggct gaagcaggcc gtaaggcgtc tgggattacc
241 agagcacgcg ctgccctgtc gcatgccttt cagggacagg agcacaaccc agtcaaagcc
301 cccggcgtag agcgtgtcat ggccggtatc cgccgcaccc ttgggacagc ccccacacgc
361 aaacaggctg ccacggctga aattgtgcgc gacatgctgg cccactgccc ctcctccctg
421 agcggtcaga gagataaggc gcttctggcg ctcggctttg ccggagcttt gcgacgcagc
481 gagctggtgg cgctgactac agatgatctg ctgtttcagg aacgcggact actggtcacc
541 atccggcgca gcaaaactga tcaggacggc agcgggcaga ccatcggcat cccgaatggc
601 cgccgtctcc gtccagtaga cgctatacgc tcatggcttg cggcatccgg gatcacacag
661 ggaccggtgt tccgcagcat tacccgtcac gggcatctga gcgcacagcc tctctcagac
721 cggtctgtcg ccaccatcgt caagacatac gcccacgccg cgggatatga tccgaggggg
781 ttttccggtc attcccttcg ggccggattt gtgacctctg gtgcacagac ggggcaagac
841 gccctcgctc tggctcgtgt aacacgccac aaaaatctct ctgtcctgca aacctacgtc
901 cgggacgatg cccctttcct gaatcatccc ggcgaggcgt tcctgtaaga acccgaaggc
961 ggatgggagc gcccatcgtg cgcggcctgc aagcggttcc agaacgcggc accattcccg
1021 aaaacggctc ccaatcgcag ggcaagctcc ggcgtaaccg gagttctctc agccaagagg
1081 tctaaaaggt cggcctcgga cagagcgaga cgagcagcaa gatctgtcac gctttgtccc
1141 atagccggaa gcaggtcttc ccgcaggagc gctcccggat gcgttggtgt tcgatcagag
1201 tgtctggcca taacctgttc cttcttgcct cttcctctgt ctgacttgtc tggcgcatct
1261 gtcagacatg acagacataa cgcgggcatg cttcagttct gccagacaag tcagacagag
1321 gagtcagaca tgacagacga acctaaacca tggtctatcc ggggcgttca tcccgaggtg
1381 cggaatgccg ctctggccgc cgccaaaaga gagggggtca cgattggcga gtggttagac
1441 agagccattc ggtctcacgt taaaaacggc agaaatccaa cagaaaacct gtcagacgtt
1501 cctgtcaaac agacgccaga cttgtctgac gcagaacgtc tcgtcagcat gatcgcccag
1561 ctttcggaag ccggtgcacc ggtcccgaaa tccgtctcca gcaaagccta tgctctgatc
1621 cgggacagcc tcaaaggagt gcagcaacaa cacagggcgg ccctgccctc tcctgagcag
1681 gattgatgga tttaccagat tttgaggtca ggcagtcaaa gcgtacatct tctttctgag
1741 gatgcaccgc aagacaggac accgttaagc actacaggtg cgcataaggt ttatgtgaag
1801 tagtcacgcc gttagcgtgg gcctacttca cctgtcctgc ccaactttta caagatattt
1861 tgacggcata aacggttata gccgagcgta aaactcggtt attttttgca aatcatggtt
1921 atattttttt gtcattcttg gttatttttt agcagggctg atttggatca tccaaaaaat
1981 agagagtgaa attttagcgg ctaaaatttt ctgaaaaatt tgatcctctc ttttgctttg
2041 tctgtcccat tggatagaca aacctctccc attactccct gcttcctgag cctttggatc
2101 gtctcgtttg cttggtgtga gaggggggta tcaggtcttt cccctatatc ccgcctcttg
2161 aggtgtctgc ccgctttgca tacgggtcag aatctccagc cactcgtctt tcgtatgccg
2221 cggatagggt tgatttatat ttttggaata ggtttccgct gtaaaaatgt cagtctgaag
2281 aaagcgctgt ttcctgcggg ccagagcctc tcgtaactgc tgcgcatagt gtcgggccgc
2341 aaccttggcc tgctctagtg gcttcagcac cagtcgatac agattggagc cactcaccat
2401 acggccctga cgcttcaccc gacgccgggt gcgctccaca agaccaagga ggtaggcttt
2461 ctcaaggctg cggatgactg ttcgagctga acaacccgca cgtgctgcta tggcttcatg
2521 gctgggaaag agaccgtgtg gaccctcaaa ggaggcgagc gcctgtaaga ccagatgtgt
2581 ctttccggag atcatccggc tctgcgtgag tgtccaaagt tgggaagaaa acgtctgaga
2641 caaagccggg ccctttctaa attatgggcg aggcttcctt ctttcctgcg atattaggct
2701 tgaaagcctg ttaggctatg cctactatat cgcatcggac gcatgagtgt gtgtcagcac
2761 ctcctgcatc aagtccacct cgccgggaag cgagattttt gaaggggatg ccttgcaggg
2821 cgtccccttt tttatttcta ttacattgcc gctaccctgc acatatagca agccactctt
2881 ttctagagta atgtttctca aaacaaaaaa ataaaatttt tatataacta tattttccaa
2941 tatcctttct tatatgttgg atatatcaat ccttcttttt tcattttcaa taaatgtgtc
3001 ctaaaagagc ttttatttaa atttttgtat tttgagttta agtaatcata tatgaagcat
3061 gactttgtag gcttaccatt cctaaacttt aaataatcaa ttatataaga tctaagtatt
3121 tttatatcta ttcttttttc tgttggatta atattattaa ttttcaacaa tccaaaattt
3181 aaatctctta acattccgta tgtaacgtct ctttcttttt ttagtcttga taattcagaa
3241 tcaatttctt ttaatttatt tgaaagaaat tcagttacaa ctcgattatc ttcgatagtg
3301 gaattatctt tcatttttgt tgtcctgtta atttttacaa cattatctga aatttgttca
3361 ccaattcctt taaaaaaacc acatattttt tcgttttttt gttgactata attatctatg
3421 gcgatattct tgatatcaag aatatcgcca tcatgttatt ttttgttttt taggacattt
3481 ccttcttgat ttccgccctt gtcggcgata tagaagaaag acggaaacaa aaaagccccc
3541 cgagaaattc ggagggctct tggatgagtt agttgcttag tgtgatcgat gcgcagttga
3601 aatgcgggcg ggaaccctca tgccaactta ccgtgcagct gccgtgcacg tgcatcgaaa
3661 caaacaacat aacagcgtaa aaaagctgca tgcgcatgtt cctttcatag ttagagtgta
3721 attagcgtaa aaaatctcct tataaaattg gcaatactac atctgtacca cagctcttga
3781 tcctttgtca agggcgttaa acaaaattta ttttctggct tccgggaatg aacattcccg
3841 gaagccagaa agctccccta tcatgagcaa tgacggtacc ctcattgctc atgatcccac
3901 tctctgagac tcgatcaggc caccatcgcc cgtcgcaccg cgtcgggctc acgccacaag
3961 acacgcagaa gcgtccgtac tgccgggtca aggctcacac ggccctgctc ccagttccgc
4021 catgttgcca caggcacacc ggccagagcg gcaatgtctg tctgggtcag cttcaactgg
4081 cggcgtaccg tcgcaggaga cggataagcc ggccccggca gatcgctttg tgtcccatct
4141 tcgcgggcct gctggtcaat ctctgcggcc gtcgtcgcct gaacgcgtgc ccgatcgacc
4201 cggccgccac gacgtttgat gtctgccaat gtcagttttg ccatttgatc cactcctttc
4261 ggtgcatctt ccgggccgag atgatgcgca gacacgtccc gcgcaccgta taaacgacca
4321 taaacgggat cccctcgatc aagcctgcgg ctctaatacg gggttctcca taatccttac
4381 ggtcgtccgg tttctgaaga acaggcccca gaaaaatctg ggccgcatat tcgaaatcga
4441 acccccgctc ttcaaagcag gcatcgcttt tcgcgtcgtc ccattcaaac tcgatctcag
4501 gccctgtcat gctcctttat atacgctgtt agcgtagttt cgcaagggat atcagcctgt
4561 gccgatcgct catgctagac cctagcgcac ccgtgccgtt cggagagacc ccacc
//