LOCUS AP011542 5838 bp DNA circular BCT 27-SEP-2016
DEFINITION Bacillus subtilis subsp. natto BEST195 plasmid pBEST195S DNA,
complete genome.
ACCESSION AP011542
VERSION AP011542.1
DBLINK BioProject:PRJDA38027
Sequence Read Archive:DRR000001
BioSample:SAMD00016353
KEYWORDS .
SOURCE Bacillus subtilis subsp. natto BEST195
ORGANISM Bacillus subtilis subsp. natto BEST195
Bacteria; Bacillota; Bacilli; Bacillales; Bacillaceae; Bacillus.
REFERENCE 1 (bases 1 to 5838)
AUTHORS Nishito,Y., Osana,Y., Popendorf,K., Toyoda,A., Fujiyama,A.,
Itaya,M. and Sakakibara,Y.
TITLE Direct Submission
JOURNAL Submitted (29-JUL-2009) to the DDBJ/EMBL/GenBank databases.
Contact:Yasubumi Sakakibara
Keio University, Biosciences and Informatics; Kouhoku-ku, Hiyoshi
3-14-1, Yokohama, Kanagawa 223-8522, Japan
REFERENCE 2
AUTHORS Nishito,Y., Osana,Y., Hachiya,T., Popendorf,K., Toyoda,A.,
Fujiyama,A., Itaya,M. and Sakakibara,Y.
TITLE Whole genome assembly of a natto production strain Bacillus
subtilis natto from very short read data
JOURNAL BMC Genomics 11, 243 (2010)
REMARK Publication Status: Online-Only
COMMENT Gemome Coverage: 131x
Sequencing Technology: Illumina Genome Analyzer II
FEATURES Location/Qualifiers
source 1..5838
/db_xref="taxon:645657"
/mol_type="genomic DNA"
/organism="Bacillus subtilis subsp. natto BEST195"
/plasmid="pBEST195S"
/strain="BEST195"
/sub_species="natto"
CDS 166..1185
/codon_start=1
/gene="rep"
/locus_tag="BSNT_90002"
/note="from glimmer orf00002; involved in initiation of
replication"
/product="replication protein"
/protein_id="BAI87820.1"
/transl_table=11
/translation="MYSSENDYIILEDKTATGKKRDWKGKKRRTNLMAEHYEALQSKT
GIPYYGKKAEKLCSCAECLSFKRDPETGKLKLYQAQFCKVRLCPMCAWRRSLKIAYHN
KLIVEEANRQYGCGWIFLTLTVRNVEGDGLKPMIADMMKGWNRLFGYKRVKVATLGYF
RALEITKNHEEDTYHPHFHVLLPVKKSYFTHNYIKQSEWTSLWKRAMKLDYTPIVDIR
RVKGRAKIDAEQIESDVREAMMEQKAVLEISKYPVKDTDVVRGNKVTEDNLNTVFYLD
DALSARRLIGYGGILKEIHKELNLGDAEDGDLVKIEEEDDEVANEAFEVMAYWHPGIK
NYIIR"
CDS 1324..1842
/codon_start=1
/locus_tag="BSNT_90003"
/note="from glimmer orf00003"
/product="hypothetical protein"
/protein_id="BAI87821.1"
/transl_table=11
/translation="MYICVVFSIILILFTSIEILLGGKVFMVTTIGKSKMWVGIIVVL
SLLLVSFSPAVKADTKDKYYSTTSTQSSTKSYRKANTSGVYVKVLKAGRSRDVAISVF
ADANKGKGKPHWVNVSGSDGATLGKYVTAGHTYHLTNYAVERYGKNVPIQLFVSNGSG
KKVEFYWSPDCR"
CDS 1964..2524
/codon_start=1
/gene="sigP"
/locus_tag="BSNT_90005"
/note="from glimmer orf00005; involved in processing of
pre-proteins"
/product="type I signal peptidase"
/protein_id="BAI87822.1"
/transl_table=11
/translation="MTKEKVFKKKSSILEWGKAIVIAVILALLIRNFLFEPYVVEGKS
MDPTLVDSERLFVNKTVKYTGNFKRGDIIILNGKEKSTHYVKRLIGLPGDTVEMKNDH
LFINGNEVKEPYLSYNKENAKKVGINLTGDFGPIKVPKDKYFVMGDNRQESMDSRNGL
GLFTKDDIQGTEEFVFFPFSNMRKAK"
CDS 2859..4307
/codon_start=1
/gene="mob"
/locus_tag="BSNT_90006"
/note="from glimmer orf00006"
/product="mobilization protein"
/protein_id="BAI87823.1"
/transl_table=11
/translation="MANYAVIRMEKYKKDRLNGTQKHNQREFQKSKNENIDRERTHLN
YDLVNEKPISYSKAIHEKIEGRVKRKVRADAVLVSEFLITASPDYMNGLSDEEQRRYF
ETAVDHLKEKYSAENMLYATVHMDEATPHMHVGIVPITEDGRLSAKDFFNGKLKMKAI
QDDFHRHMVENGFDLVRGEPSEKKHENVHQYKINQRQAELERLNAEIALKEKQREELE
KQNKAVQAVIEVKKESLTAKAEELKMPTIEHEKAWLKKDKVIVPERELHALYAYAEQK
TKTAAELAGQLKSETQEKERWQSIARQEADRADEKDQRLQELQSRIHSEVEASKKEMR
RKLAKEFTEEQRQDLRQEVKEELTTLRTENEELSAENKVLIIQRNSEAAESLKLKQEL
DKRNGQYAEVLSFAKKQNQTLEKVAGENKALKKENKTLKERVAVLEQWKDKMVQWAKE
KLPKMRKLAASFFRTAGMPREANKYKDNELER"
CDS complement(4318..4797)
/codon_start=1
/locus_tag="BSNT_90007"
/note="from glimmer orf00007"
/product="putative DNA-binding protein"
/protein_id="BAI87824.1"
/transl_table=11
/translation="MDMGIKLSSKDVAKHLGIEPVTVRKYASMLEEQGYSFNKDSKGW
RLYTEDDVKTLEYLCTMTKINGHSLDETVKHIASLYRSKLTISDTATSLQDNPLVEFM
KRQEEFNRHMAERMERFEKRQQERHETLTAALRESLETQKMIAATKQKKWWKFWKGN"
CDS 4926..5087
/codon_start=1
/locus_tag="BSNT_90008"
/note="from glimmer orf00008"
/product="hypothetical protein"
/protein_id="BAI87825.1"
/transl_table=11
/translation="MSDFETGMRYVRATLGFEGLVLTEEEEKLLERRFHGEITEEEYI
QKAFELSLM"
BASE COUNT 1814 a 964 c 1415 g 1645 t
ORIGIN
1 ttgatactat atagaaacat ctcaaggcga aaaaatagcc cccatccctt atttgtcaag
61 ggtttgacgg ctttttgaca tgtagaaact ccttccgcta ttattaaagt gcccactaaa
121 ataatagaat gctagattac tagctcagaa ggagtttttt tgttcatgta ttcatctgaa
181 aatgattata tcatccttga ggacaagacc gcaacaggta aaaagcggga ttggaagggg
241 aaaaagagac ggacgaatct tatggctgag cactatgaag ctttacagag taaaactggt
301 ataccttact atggcaaaaa agctgagaaa ttgtgcagtt gtgcggaatg tctttcgttt
361 aaacgagacc cggagacggg caaattaaag ttgtatcaag ctcagttttg taaagtgagg
421 ttatgcccga tgtgtgcgtg gcgtaggtct ttaaaaattg cttatcataa taaattaatc
481 gttgaggaag cgaatcggca gtacggttgt ggatggattt ttctcacact gacggttcgg
541 aatgtcgagg gtgacggatt aaaacccatg attgctgaca tgatgaaagg atggaaccgc
601 cttttcggat ataaacgagt taaggtagcg actttaggtt atttcagagc tttagagatt
661 accaaaaatc acgaagaaga tacatatcat ccgcattttc atgtgttgtt gcctgtgaag
721 aaaagctatt ttactcacaa ttacattaag cagtctgagt ggacgagctt atggaaaagg
781 gcgatgaaac tggactacac gccgattgtt gatatccgaa gagtcaaggg aagagctaaa
841 attgatgccg aacagattga gagcgatgtg cgggaagcca tgatggagca aaaagctgtt
901 cttgaaatct ctaaatatcc ggttaaagat acggatgttg tgcgcggcaa taaggtgaca
961 gaagacaatc tgaacacggt gttttatttg gatgatgcgc tttctgcccg ccggcttatt
1021 ggttacggtg gcatcttgaa ggaaattcat aaagaactaa acctcggtga tgcggaggac
1081 ggcgatctcg tcaagattga ggaagaagat gacgaggtgg cgaacgaagc atttgaagtt
1141 atggcttact ggcatccagg cattaaaaat tacataatca gataaaaagc aggcgttgtt
1201 cctgcttttt ttatactcta atagtcaaat caagagttaa ttttagatgt aattgtgaga
1261 attagagtgg ctgaccagta tttgaaactt cttgggctac tttcttaact ttatattaaa
1321 actatgtata tatgtgttgt tttttctatt attttgatat tatttacaag tattgaaatt
1381 ttgctaggag ggaaagtttt tatggttacc acgattggta aaagtaagat gtgggtaggt
1441 attattgttg tattatcttt attattggta tctttttcgc ctgctgtaaa ggctgatact
1501 aaggataaat attattctac aacttctacc caatcttcaa caaaaagtta tcgtaaagct
1561 aatactagtg gggtctatgt gaaagtactt aaagctggac gttctcgtga tgttgctatt
1621 tcagtttttg ctgatgcgaa caaagggaaa ggaaagccac attgggtaaa tgtttctggt
1681 agcgatggcg ctactctggg aaaatacgtg actgcagggc atacatatca tcttacaaac
1741 tatgctgtag aacgttatgg aaagaatgtt cctatacaat tatttgtttc taatggttct
1801 ggcaaaaaag ttgaatttta ttggagtccc gattgtagat agtccaaata gcagatgatg
1861 aaaaagcagg attaatcctg ctagcaggat taatcctgct tttttatttt tgttttggta
1921 aaatgtgata agcgggtttt gaaatataga ggaggaaatt tctttgacaa aagagaaagt
1981 tttcaaaaag aaaagctcta ttttagagtg gggcaaggct attgtgatag ctgttatact
2041 tgctcttctt attcggaatt ttttgtttga gccatatgtg gtagaaggga agtctatgga
2101 tcccactttg gttgattctg aaagattatt tgtaaataag actgtgaagt atacaggtaa
2161 ttttaaacga ggggatataa taattttaaa cggaaaggaa aaaagcacac attatgtgaa
2221 gcgattaatt ggtttacctg gagacactgt agaaatgaag aatgaccacc tttttattaa
2281 tggaaatgaa gttaaggaac catatctttc ttataataaa gaaaatgcta agaaagtggg
2341 tataaacctt acaggagatt ttggaccaat taaagttcca aaagataaat attttgttat
2401 gggcgataac cgacaagaat caatggatag tcgtaatggg cttggactct ttactaaaga
2461 tgatattcag ggaaccgaag agttcgtatt ttttccattt agtaatatgc gaaaagctaa
2521 ataattttta gaccgaaaca ggctataagg tctgtttttt cattttgtta tgaacattta
2581 gcacacagat caaagttttc atagtttgaa tgctttgata gcagcaaagg gtatttctga
2641 ttttctgccg atctctcatc ggcggaaaag tcgggtcggc ggacagccga caagtggcac
2701 gaactttcga tgcgacagcg agaatgagag agccaccagc accgcaggtc gcacgtccaa
2761 atttgccatg ggcataattt ggtgtagtgc gttacaccaa agataaactt tgtgttacca
2821 taacccctat acagtggtct gaatcggggg tttttctcat ggcaaattat gcagtcatca
2881 ggatggaaaa atacaaaaaa gatagattga atggaacgca aaaacacaat cagcgggagt
2941 ttcaaaaaag caaaaatgaa aatattgatc gggagcggac gcacttaaat tatgatctag
3001 tgaacgagaa accgattagc tattcaaaag cgattcatga aaaaattgag gggcgagtca
3061 aacggaaggt ccgagcggat gctgttttgg tcagcgaatt tttgatcacg gcaagtcctg
3121 actatatgaa tgggctgagc gatgaggagc agcggcgcta ttttgaaaca gcggttgatc
3181 atttgaaaga gaaatacagc gctgaaaaca tgctttatgc tacagtccat atggatgaag
3241 cgactcctca tatgcatgtt ggtattgtac cgatcacaga ggacggccga ctctctgcga
3301 aagatttttt taatggcaaa ttgaagatga aagccattca agatgatttt catcggcaca
3361 tggttgaaaa cggttttgac ctggtgcgcg gcgaaccaag cgaaaagaag catgagaatg
3421 ttcaccagta taaaataaat cagcggcaag cggagcttga gcggcttaat gctgaaattg
3481 ctttaaagga aaagcagaga gaggaactgg aaaagcaaaa caaagctgtt caagcagtta
3541 tagaagtgaa aaaagaatcg ctgacagcta aggctgaaga gttgaaaatg ccgactattg
3601 aacatgaaaa agcgtggctc aaaaaggata aagtcattgt gccagagcgg gaactccatg
3661 ctttgtatgc ctatgcggag cagaaaacta aaacggcagc cgagttggcg gggcaattga
3721 agtcggaaac gcaggaaaag gagcgctggc agtctatcgc ccggcaggaa gcagatcggg
3781 cggatgaaaa agaccaacgg cttcaggaac tgcagagtag gatccattca gaagttgaag
3841 cgtccaaaaa ggaaatgcgg cgcaagcttg caaaggaatt tacggaagaa cagcgtcagg
3901 atcttcggca ggaagtgaaa gaggaactga cgactttacg aacggaaaac gaggaactgt
3961 cagctgaaaa taaagttttg atcattcaaa gaaatagcga agctgcggag agcctaaaac
4021 taaaacagga acttgataag agaaacgggc agtatgctga ggttttgagt ttcgccaaga
4081 agcagaatca aacgcttgaa aaagtggctg gagaaaacaa ggcgttaaaa aaagaaaata
4141 agacactaaa agagagagtt gccgtactgg aacaatggaa agacaaaatg gttcagtggg
4201 ctaaagaaaa attaccaaag atgcggaaat tagcggcatc gtttttccgt acggctggaa
4261 tgcctagaga agccaataaa tacaaggaca atgaattaga gcggtgaaaa cgggcaatca
4321 attgcccttc caaaatttcc accacttttt ttgtttggtg gctgcgatca ttttttgtgt
4381 ctcaagggac tcacgtaatg cagcggtgag tgtctcgtgc ctttcttgct gtcttttttc
4441 gaatcgttcc atccgttctg ccatgtggcg gttgaattct tcctgtcgtt tcatgaattc
4501 gactaaagga ttgtcctgta gcgatgtagc ggtatccgat atggtcagtt tagaacgata
4561 taagcttgct atgtgcttta ccgtttcgtc gagtgagtgt ccattgatct tagtcattgt
4621 acatagatac tctaaagtct ttacgtcatc ctcggtatag agtcgccatc ctttcgaatc
4681 tttattgaac gagtagcctt gttcttcaag catactggca tacttgcgga cagttactgg
4741 ctctataccg aggtgttttg cgacgtcctt tgatgataat ttgattccca tatccataac
4801 gtatcacctc gtaaaaaggg ttcgctatag tgagggcaaa gccctttatt tagagccatt
4861 taaaaagaaa gctgttccgt tcttttatca ggttgggact gtatttagtt tatgggggag
4921 tgccaatgag tgattttgaa acaggaatga gatatgtaag agcaaccctt ggctttgagg
4981 gtttagtgct gacggaagaa gaggaaaagc ttttagaaag acggtttcat ggagaaatca
5041 cagaggaaga atacatacaa aaagcgtttg agctttcttt gatgtgatgt acctgcaggg
5101 gcttataata ttcatagctg ttgttagaac ctaaaccctt ttaccgtttt tggcggtgag
5161 ggttcttttt ttttaggcag tgatgcgatt ttggcgtgag tcaacggtaa ccggaccgta
5221 gggaggatta aggagttgac tcgctcagcg ccacccgaac cctttcagca ctcaaacaaa
5281 cccgtttgtt tgacgccaac cggcgaggga gccccccgaa gaagcggggg gttgggggga
5341 ttgaatgctg gcatccaacg gccgtccgtt ggtgggtttg ggcaaagccc aagaactgtt
5401 gcaaggctcg ttgagaataa agaatgcttt tcaggatgct tagaatcgtt tctgagagct
5461 tcaaataaaa aagatgacct tttatagggg gaagctctta aaattgaatg taggggcatt
5521 taaacacgtt taaaaataaa aaaagcagac tctttagagt ccgccttgtt atttttaacc
5581 cagtgctcca ttttcggctg tttggaaatc ttttgagatg ccgaaccatc cattttcttt
5641 tgttccatga aaaaagtgct tttggatgct taaaaaggct ttttcgtata aaaaaagccg
5701 atttttgaaa aaaaaatctc cccccctgcg ggggaagaat ggttttgatc tttgggtttt
5761 aggttttaaa aaaagccggc tgttttcagc cggctttttt tcgattttgg cggagccgaa
5821 atcgggtctt ttcttatc
//