LOCUS AK376794 1343 bp mRNA linear PLN 20-MAY-2011
DEFINITION Hordeum vulgare subsp. vulgare mRNA for predicted protein,
complete cds, clone: NIASHv3136G19.
ACCESSION AK376794
VERSION AK376794.1
KEYWORDS FLI_CDNA; CAP trapper.
SOURCE Hordeum vulgare subsp. vulgare (domesticated barley)
ORGANISM Hordeum vulgare subsp. vulgare
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.
REFERENCE 1 (bases 1 to 1343)
AUTHORS Matsumoto,T., Kanamori,H. and Tanaka,T.
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2010) to the DDBJ/EMBL/GenBank databases.
Contact:Takashi Matsumoto
National Institute of Agrobiological Sciences, Division of Genome
and Biodiversity Research; Kannondai 2-1-2, Tsukuba, Ibaraki
305-8602, Japan
REFERENCE 2
AUTHORS Matsumoto,T., Tanaka,T., Sakai,H., Amano,N., Kanamori,H.,
Kurita,K., Kikuta,A., Kamiya,K., Yamamoto,M., Ikawa,H., Fujii,N.,
Hori,K., Itoh,T. and Sato,K.
TITLE Comprehensive Sequence Analysis of 24,783 Barley Full-Length cDNAs
Derived from 12 Clone Libraries
JOURNAL Plant Physiol. 156, 20-28 (2011)
COMMENT This clone was obtained at our laboratory
Please visit our web site
URL: http://barleyflc.dna.affrc.go.jp/hvdb/index.html
FEATURES Location/Qualifiers
source 1..1343
/clone="NIASHv3136G19"
/clone_lib="Normalized barley full-length cDNA library
from adult flower"
/cultivar="Haruna Nijo"
/db_xref="taxon:112509"
/dev_stage="adult flower"
/mol_type="mRNA"
/organism="Hordeum vulgare subsp. vulgare"
/sub_species="vulugare"
/tissue_type="flower"
CDS 26..1084
/codon_start=1
/product="predicted protein"
/protein_id="BAK07988.1"
/translation="MAPCEELQEEVARSGPALIVGATGYIGRFVAEACLDSGRRTFIL
VRPGNACPARAASVDALLRKGAFVVEGRVDGKDGKRSVETALRAHGIEVVISVMGGAN
ILDQLGLIKAIQAAGTVKRFLPSEFGHDVDRARPVGAGLGFYEEKRRVRRAAEAAGVP
YTYICCNSIAGWPYFDNMHPSEVRPPLDRFQIYGDGTVRAFFVAGTDIGKFTVKAAYD
ARSVNKAVHFRPACNLLSTNEMACLWESKIGRTLPRVTLSKEELLAMAAEDIIPESIV
ASLTHDIFINGCQTNFGIDGSRDIEISSLYPDIPFRTIDECFDDYARGLHLEEEAEES
KKSNAPMVEILAVYPTCA"
BASE COUNT 267 a 417 c 395 g 264 t
ORIGIN
1 tgaggcacaa ggacgtacgg aagcaatggc gccttgtgag gagctgcagg aggaggtggc
61 tcgctccggc ccggccctca tcgtcggcgc caccggctac atcggccgtt tcgtcgccga
121 ggcctgcctc gacagcggcc gccggacctt catcctcgtc cgccccggca acgcctgccc
181 cgcgcgcgcc gcctccgtcg acgcgctcct ccgcaaaggc gccttcgtcg tcgagggccg
241 cgtcgacggg aaagacggca agaggtccgt ggagacggcg ctccgcgcgc acggcattga
301 ggtggtgatc tcggtcatgg gcggcgccaa catcctcgac cagctcggcc tcatcaaggc
361 catccaggcc gccggcaccg tcaagaggtt tttgccgtcg gagttcgggc acgacgtgga
421 cagggcgcgg ccggtggggg ccgggctggg gttctacgag gagaagcggc gcgtccggcg
481 ggcggcggag gcggccggcg tgccctacac ctacatctgc tgcaactcca tcgccggctg
541 gccctacttc gacaacatgc acccgtccga ggtgcgcccg ccgctcgacc gcttccagat
601 ctacggcgac ggcaccgtca gagcgttctt cgtggccgga accgacattg gcaagttcac
661 ggtgaaggcc gcgtacgacg cccggagcgt caacaaggcc gtccacttcc ggccagcctg
721 caacctcctc agcaccaacg agatggcctg cctgtgggag agcaagatcg gccgcacgct
781 gccgcgcgtc acgcttagca aggaggagct gctcgccatg gccgcagagg acatcatccc
841 ggagagcata gtcgcgtcgc tgacgcacga catctttatc aacggctgcc agaccaactt
901 cggcatcgac gggtccagag acattgagat atccagcctt taccccgaca ttcccttcag
961 gacgattgac gaatgcttcg acgactacgc tcgtggcctc cacctggagg aagaagctga
1021 agagagcaag aaaagcaacg cgcccatggt ggagatattg gcagtttatc ctacgtgtgc
1081 ttgatcgaga tcgacaagag tgtaactcgg caacattatt tgtctcgcct tgcttttcta
1141 tactgtttga ggccctgttt ggattattct tttcccttaa aatacccctt ttaaaaatac
1201 acgtctccgc ccttcgtttt gtttccggcc caaaatcgct cttggccagt aaaggcatac
1261 atagtggttg agaatatatg tcttatgtta agcttgtcat gtataatgta tagatgtcaa
1321 taaaacatga tgtataaccg gtt
//