LOCUS AK376115 1914 bp mRNA linear PLN 20-MAY-2011 DEFINITION Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3115B08. ACCESSION AK376115 VERSION AK376115.1 KEYWORDS FLI_CDNA; CAP trapper. SOURCE Hordeum vulgare subsp. vulgare (domesticated barley) ORGANISM Hordeum vulgare subsp. vulgare Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum. REFERENCE 1 (bases 1 to 1914) AUTHORS Matsumoto,T., Kanamori,H. and Tanaka,T. TITLE Direct Submission JOURNAL Submitted (01-OCT-2010) to the DDBJ/EMBL/GenBank databases. Contact:Takashi Matsumoto National Institute of Agrobiological Sciences, Division of Genome and Biodiversity Research; Kannondai 2-1-2, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS Matsumoto,T., Tanaka,T., Sakai,H., Amano,N., Kanamori,H., Kurita,K., Kikuta,A., Kamiya,K., Yamamoto,M., Ikawa,H., Fujii,N., Hori,K., Itoh,T. and Sato,K. TITLE Comprehensive Sequence Analysis of 24,783 Barley Full-Length cDNAs Derived from 12 Clone Libraries JOURNAL Plant Physiol. 156, 20-28 (2011) COMMENT This clone was obtained at our laboratory Please visit our web site URL: http://barleyflc.dna.affrc.go.jp/hvdb/index.html FEATURES Location/Qualifiers source 1..1914 /clone="NIASHv3115B08" /clone_lib="Normalized barley full-length cDNA library from malt" /cultivar="Haruna Nijo" /db_xref="taxon:112509" /dev_stage="germination" /mol_type="mRNA" /organism="Hordeum vulgare subsp. vulgare" /sub_species="vulugare" /tissue_type="seed" CDS 138..1721 /codon_start=1 /product="predicted protein" /protein_id="BAK07310.1" /translation="MAAASLWDELVVAASTGGSSGTVVSICVFTAVLCLCLVASHLLE ENKWVNESITALIIGCIVGALIFLLSKGRNSHILRFDEQLFFIYVLPPIIFNAGFQVK KKQFFHNFLTIMSFGVFGVFISVAIVSAGFYWLLPKVGFGRLDAVDYLALGVIFSSTD TVCTLQVISQDETPRLYSLVFGEGVVNDATSVVLFNAIKNMDITKLKGGAVLKVIGDF LYLFATSTILGATIGLFTAYVLKALYFGRHSTDREVALMALMAYLSYMLAELLSLSGI LTVFFCGIVMSHYAWHNVTESSRITTRHIFATLSFIAETFIFLYVGMDALDLDKWKTT QASLETSVGIFGVIISLILLGRAAFVFPLSILSNFMSGNSEKAPITFKHQVVIWWAGL MRGAVSIALAYNQFTFSGVTQDPVHATIITSTIVVVFFTTLVFGFLTRPMISAMLPQH RHREPTGGRSTGSNSPKDEFILPFLGDEDASGSGSGFVQAKRSISMMLERPIHTVHIY WRKFDDRFMRPIFGGPQSY" BASE COUNT 449 a 455 c 490 g 520 t ORIGIN 1 gggcagagtt ggagctctct gctcgtcgcg gcgcgcacag aggcagcgaa gaagagggcg 61 gggcaggcgg tggtgatctg aaaccaacct gaattgaatc gaagcgagag caccggggct 121 gcatatgcgc gcggcacatg gcggctgctt cgctgtggga cgagctggtg gtggcggctt 181 cgaccggggg gagcagcggc accgtggtgt ccatctgcgt gttcacggcg gtgctgtgcc 241 tctgcctcgt cgccagccac ctcctcgagg agaacaaatg ggtcaacgag tccatcaccg 301 cgctcatcat cgggtgcatt gttggggctc tcatatttct gctgagcaaa ggcaggaact 361 cgcacatcct gaggttcgac gagcagctct tcttcatcta cgtccttccg cccataatct 421 tcaacgctgg gttccaggtc aagaagaagc agttcttcca taatttcctc accatcatgt 481 cctttggggt tttcggggtt ttcatctcgg tcgcaatagt ttccgcaggt ttctactggc 541 tccttccaaa agttggtttt ggcagacttg acgcggtgga ttatctagca ctgggagtca 601 tattctcttc aacagatacc gtttgcacgc tgcaggtcat aagccaagat gagacaccaa 661 ggttgtacag cttggtattc ggagaaggag tcgtcaatga tgcaacatca gtggtcctat 721 tcaatgctat aaagaatatg gatatcacta agctcaaagg cggggcggtg ctaaaagtta 781 tcggagattt cctctatctt tttgcgacta gtactatcct tggcgccaca atcggactgt 841 tcactgctta cgttctcaaa gcactgtact ttggcaggca ctcgactgat cgggaggtcg 901 ccttaatggc tctgatggct tatttatcgt atatgttagc agagttgtta agtctgagtg 961 gtattttgac tgttttcttt tgcggcatcg tcatgtccca ttacgcatgg cataatgtaa 1021 cagagagctc ccgaatcacc acaaggcaca tatttgcgac actatcattc atcgctgaga 1081 cctttatctt tctttatgtt ggaatggatg cccttgacct agataaatgg aagacaaccc 1141 aagcaagcct cgagacctca gttggtattt tcggtgtcat catttcactc attttgctgg 1201 gacgggcagc gtttgttttc cctctttcaa ttctttcaaa ctttatgagt gggaattctg 1261 aaaaagctcc aatcacattc aagcatcagg tcgtgatttg gtgggctggg ctcatgagag 1321 gcgccgtttc aattgcgcta gcatataatc agttcacatt ttcaggagta acacaggatc 1381 cagtccatgc aaccatcatc accagtacaa ttgtcgtagt atttttcaca accctggtgt 1441 ttggcttctt gacgaggccg atgataagcg ccatgctccc tcagcatcgg caccgggagc 1501 cgacaggcgg ccgcagcaca ggaagcaact cgccaaagga tgaattcatc ctgccgtttc 1561 tcggtgatga agatgcgtcg gggagtggaa gtggcttcgt ccaagccaag agaagcatat 1621 caatgatgtt ggagagacct atccacacgg tgcacatcta ctggaggaag ttcgacgaca 1681 ggttcatgag accaatcttc ggcggaccac aatcttactg actggcctag ctactgaggt 1741 ggaataattg gcgcgttgcg actggagtag tatgtataat cagaggtcag catacataat 1801 cctgtgtaac agtacctttg agttttgtaa atttgttagt tactactcct acttactaca 1861 aattttctga agtttgtaac atgaacactg tcaagcaaat tcagtttgct cttt //