LOCUS AK374926 1375 bp mRNA linear PLN 20-MAY-2011
DEFINITION Hordeum vulgare subsp. vulgare mRNA for predicted protein,
complete cds, clone: NIASHv3080I11.
ACCESSION AK374926
VERSION AK374926.1
KEYWORDS FLI_CDNA; CAP trapper.
SOURCE Hordeum vulgare subsp. vulgare (domesticated barley)
ORGANISM Hordeum vulgare subsp. vulgare
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.
REFERENCE 1 (bases 1 to 1375)
AUTHORS Matsumoto,T., Kanamori,H. and Tanaka,T.
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2010) to the DDBJ/EMBL/GenBank databases.
Contact:Takashi Matsumoto
National Institute of Agrobiological Sciences, Division of Genome
and Biodiversity Research; Kannondai 2-1-2, Tsukuba, Ibaraki
305-8602, Japan
REFERENCE 2
AUTHORS Matsumoto,T., Tanaka,T., Sakai,H., Amano,N., Kanamori,H.,
Kurita,K., Kikuta,A., Kamiya,K., Yamamoto,M., Ikawa,H., Fujii,N.,
Hori,K., Itoh,T. and Sato,K.
TITLE Comprehensive Sequence Analysis of 24,783 Barley Full-Length cDNAs
Derived from 12 Clone Libraries
JOURNAL Plant Physiol. 156, 20-28 (2011)
COMMENT This clone was obtained at our laboratory
Please visit our web site
URL: http://barleyflc.dna.affrc.go.jp/hvdb/index.html
FEATURES Location/Qualifiers
source 1..1375
/clone="NIASHv3080I11"
/clone_lib="Normalized barley full-length cDNA library
from young panicle"
/cultivar="Haruna Nijo"
/db_xref="taxon:112509"
/dev_stage="young panicle"
/mol_type="mRNA"
/organism="Hordeum vulgare subsp. vulgare"
/sub_species="vulugare"
/tissue_type="flower"
CDS 520..1224
/codon_start=1
/product="predicted protein"
/protein_id="BAK06122.1"
/translation="MARGPERARTSGAPPPRTPPARESQKVYSSTDIGGGGRRAFAEF
SSYVVRKAPPLERKVECTLEELYAGCKKEVKYTRDVVTKNGLIVKKEVTQTIRVKPGW
KKGAKVTFEGMGNERPGCLPGDAVFTVSARRHKAFKRQGDDLVLKAEVPLVSALTGWS
FSFRLLGGEKVSWSFRDEVISPGYEKVVRGEGMPVIGGRKGARGDLRVKFDVVFPKNL
TDEQRRGLVEILRGCP"
BASE COUNT 259 a 418 c 479 g 219 t
ORIGIN
1 ggtcctgaat cctctcgctc actcgctcca cccctccacg tcccttggct ggtggcctgg
61 catcgcacgc cgccttcctc gcaacaacgc cgggcaatgg ggaacccacc ggagctctac
121 tacaagctgc tcaacatcac caaggacacg cccccgcagg agatcagggc ggcgtacagg
181 tgcctggtgc gccaatggca ccccgacaag cacccgccct cctccaagtc cgaggccgag
241 gaccggttca aggccatcac ccaggcgtac gaggtgcgtg atcatccgtc aaatggacgt
301 acgcgttcca tgtctcccgt ttcgatcttg agttcttgac gcagaattct gaactttcgc
361 ttgcataatg gatgggctcg gcatggccgc cggtgctttc gctgtctgca ggctctactc
421 gaccagcagg agaacagggc ggtgctccgg gcgtgcaacg ccgacgccgc cgacgcaggg
481 aggaggagct gggctagggc cgaggagggc gcggcggcga tggcgcgggg tcccgagagg
541 gcgaggacga gcggagcgcc gccgccccgc acgcctccgg cgagggagtc ccagaaggtg
601 tacagctcca cggacatcgg gggcgggggc cggcgcgcgt tcgccgagtt ctccagctac
661 gtggtgcgca aggcgccgcc gttggagcgc aaggtggagt gcaccctgga ggagctctac
721 gccgggtgca agaaggaggt caagtacacc cgcgacgtcg tcaccaagaa cgggctgatt
781 gtcaagaagg aggtgacgca gaccatccgg gtgaagcccg ggtggaagaa gggggccaag
841 gtgacgttcg agggcatggg caacgagcgg cccggctgcc tccccggcga cgccgtcttc
901 accgtgtcgg ccaggaggca caaggcgttc aagcggcagg gcgacgacct ggtgctcaag
961 gccgaggtgc cgctggtgag cgcgctcacc ggctggtcct tctccttccg cctgctcggc
1021 ggcgagaagg tcagctggtc gttccgcgac gaggtcatca gccccgggta cgagaaggtg
1081 gtcagggggg agggcatgcc cgtcatcggc ggcaggaagg gcgcgcgcgg ggatctgcgg
1141 gtcaagttcg acgtggtgtt ccccaagaac ctcaccgacg agcagcggag gggcctcgtc
1201 gagatactga ggggctgtcc ctgaagccct aaactgaact gagagcggac agccgagcag
1261 ctagcctacc ggggagtgaa attttctcgc ggccatgtca atgcactttg ggacacaact
1321 gatgatcgat ggtgtccttg tacatagaga ttttgaatgt gagatgtgag cgacc
//