LOCUS AK372544 1555 bp mRNA linear PLN 20-MAY-2011
DEFINITION Hordeum vulgare subsp. vulgare mRNA for predicted protein,
complete cds, clone: NIASHv3004M06.
ACCESSION AK372544
VERSION AK372544.1
KEYWORDS FLI_CDNA; CAP trapper.
SOURCE Hordeum vulgare subsp. vulgare (domesticated barley)
ORGANISM Hordeum vulgare subsp. vulgare
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.
REFERENCE 1 (bases 1 to 1555)
AUTHORS Matsumoto,T., Kanamori,H. and Tanaka,T.
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2010) to the DDBJ/EMBL/GenBank databases.
Contact:Takashi Matsumoto
National Institute of Agrobiological Sciences, Division of Genome
and Biodiversity Research; Kannondai 2-1-2, Tsukuba, Ibaraki
305-8602, Japan
REFERENCE 2
AUTHORS Matsumoto,T., Tanaka,T., Sakai,H., Amano,N., Kanamori,H.,
Kurita,K., Kikuta,A., Kamiya,K., Yamamoto,M., Ikawa,H., Fujii,N.,
Hori,K., Itoh,T. and Sato,K.
TITLE Comprehensive Sequence Analysis of 24,783 Barley Full-Length cDNAs
Derived from 12 Clone Libraries
JOURNAL Plant Physiol. 156, 20-28 (2011)
COMMENT This clone was obtained at our laboratory
Please visit our web site
URL: http://barleyflc.dna.affrc.go.jp/hvdb/index.html
FEATURES Location/Qualifiers
source 1..1555
/clone="NIASHv3004M06"
/clone_lib="Normalized barley full-length cDNA library
from malt"
/cultivar="Haruna Nijo"
/db_xref="taxon:112509"
/dev_stage="germination"
/mol_type="mRNA"
/organism="Hordeum vulgare subsp. vulgare"
/sub_species="vulugare"
/tissue_type="seed"
CDS 337..1398
/codon_start=1
/product="predicted protein"
/protein_id="BAK03742.1"
/translation="MSELCKIPAAMVAESVERSYVLKIDGYSRMKGLLKNGQFATSTP
FSVGGHDWTVKYYPNGCPKNCDDFISLYVRHESADAKQAKAKLTLNVLDKNGDPVPSY
TRTAPVHTFSRKAPTCGYYDFILKAELEGSAHLRGDCLTIRCDVTVMKDIEEAMVPPS
DLHRHLGDLLKSNDAADMTFQVDGQRYSAHRCVVAARSSVFKAELLGAMEESSGSTIV
IRDMEADVFESLLHFMYTDSVPPVLDVVMAGHLLVAADRYNIGRLKVICEDKLCSHID
SNMVATSLALAEQHGFRRLKEACLQFLASPSNLDAMMSSDGYEHLKSSCPAVLKELIA
RIIPAEFTSAKDIIMTMWK"
BASE COUNT 351 a 447 c 367 g 390 t
ORIGIN
1 gaacgatcag cagaaaacct aacgcaacaa tctcctctcg gctccgccgc cacccctttt
61 ccggcggtct ctccccccga tcccctccgc tcccgccgcc gcgctcagtt tctccctgct
121 tgcgacccgc tccggccgtc gagcttcacc ctcccaaatc cacgccccgg cgttccctct
181 ccacacccta ccgctagtcg ccagatcctc caatcccaag ctccagcggc agccgtgctt
241 cgggcgacac caccggacgg cgccgagaag gaacagatat aggtagagat ctttcctctc
301 gccagtcttc catcttaatc caatcccgcc cccagcatgt cagagctctg caagatccct
361 gctgccatgg tagccgaatc tgtggagaga tcttatgtgc tcaagataga tggatactca
421 agaatgaagg ggctactcaa gaacggccag ttcgccacct ccaccccttt cagtgttgga
481 ggccacgact ggaccgtcaa atattacccc aacggctgcc ccaagaattg cgacgatttc
541 atatctctgt atgtacgcca tgaatcggcc gatgccaaac aagccaaggc gaaactgacg
601 ctcaatgtgc ttgacaagaa tggtgatccg gtgccttcgt acacccgtac cgcccctgtg
661 cacaccttct caaggaaagc tccaacctgt ggctactatg atttcatcct caaggctgag
721 cttgagggat cggcgcatct tagaggcgat tgtctcacca tcaggtgcga tgtcaccgtt
781 atgaaggaca tcgaagaagc aatggttcct ccaagcgacc tgcaccggca tctcggcgat
841 ctcctgaaga gcaatgatgc agcggacatg acctttcagg tcgacgggca gagatactct
901 gctcatcgct gtgtcgttgc tgcccggtcg tctgtcttca aggcggagct cctcggcgcc
961 atggaggaga gttccggtag taccattgtc atccgtgaca tggaagctga tgtgttcgag
1021 tccttgctcc atttcatgta caccgactcg gttcctccgg tgcttgatgt ggtgatggct
1081 ggccatctac ttgtcgcggc tgacaggtac aacatcggta ggctgaaggt gatatgcgag
1141 gacaaattgt gcagtcacat tgattccaac atggtggcta ccagcttggc tttggctgag
1201 caacatggtt tccgtcgtct caaagaagct tgtttgcagt tccttgcttc tccgtccaat
1261 ttggatgcta tgatgtcaag tgatgggtat gagcatctga aatccagctg ccccgcagtt
1321 cttaaggagc tgatagctag aatcatcccg gctgaattta catcagcaaa ggatattatc
1381 atgacaatgt ggaagtaatg ctttccgtac cattattata ctccaaattt tagtaccaaa
1441 tgatattatg ctacatctcg gtttggagta gaatctttat tatcccctgc tcatgtatgt
1501 ggaacatgtt tttcactttc agtgagatat taatgaaatt caatggattt cggtt
//