LOCUS AK370300 2457 bp mRNA linear PLN 20-MAY-2011 DEFINITION Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2108H09. ACCESSION AK370300 VERSION AK370300.1 KEYWORDS FLI_CDNA; CAP trapper. SOURCE Hordeum vulgare subsp. vulgare (domesticated barley) ORGANISM Hordeum vulgare subsp. vulgare Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum. REFERENCE 1 (bases 1 to 2457) AUTHORS Matsumoto,T., Kanamori,H. and Tanaka,T. TITLE Direct Submission JOURNAL Submitted (01-OCT-2010) to the DDBJ/EMBL/GenBank databases. Contact:Takashi Matsumoto National Institute of Agrobiological Sciences, Division of Genome and Biodiversity Research; Kannondai 2-1-2, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS Matsumoto,T., Tanaka,T., Sakai,H., Amano,N., Kanamori,H., Kurita,K., Kikuta,A., Kamiya,K., Yamamoto,M., Ikawa,H., Fujii,N., Hori,K., Itoh,T. and Sato,K. TITLE Comprehensive Sequence Analysis of 24,783 Barley Full-Length cDNAs Derived from 12 Clone Libraries JOURNAL Plant Physiol. 156, 20-28 (2011) COMMENT This clone was obtained at our laboratory Please visit our web site URL: http://barleyflc.dna.affrc.go.jp/hvdb/index.html FEATURES Location/Qualifiers source 1..2457 /clone="NIASHv2108H09" /clone_lib="Normalized and subtracted barley full-length cDNA library from seedling shoot and root on Aluminium stress" /cultivar="Haruna Nijo" /db_xref="taxon:112509" /dev_stage="seedling" /mol_type="mRNA" /organism="Hordeum vulgare subsp. vulgare" /sub_species="vulugare" /tissue_type="shoot and root" CDS 18..2228 /codon_start=1 /product="predicted protein" /protein_id="BAK01501.1" /translation="MEDSKTTEKIDPSSSSSCSLRSAATTHWKEETRATFNSVRPSYR RIPGPRTPATVPHSHPGPSPEAMAAPPGRRGLAFGTAALALLAILAVARGQQQYEANA QTNCYGRNGSSVLGYVCNATAAAAPCATYVVFRSSPPYYGTAVSISYLLGSDPEAVAD ANGVPTVSPLADSRLVLAPVPCGCSPRGYYQHNSSHTIELRGETYFIIANNTYQGLTT CQALLAQNPRHGSRDLVAGNNLTVPIRCACPTPAQAAAGVRHLLTYLVTWGDSVSAIA DRFRVDAQAVFQANNLTAREIIFPFTTLLIPLKSAPTPDMLVSPAPPPAPAPPQAQQP PASGSGKWIAVGVGVGVGVLALASLIGLMLLCVRRRRTRQGVRERGRLSKVVLDVPSS ADYNALASGKHASSATTTSASSSALVSSDARAAVESLTVYKYSELEKATAGFSEDRRV KNASVYRAEINGDAAAVKRVAGDVSGEVGILKRVNHSSLVRLSGLCVHHGETYLVFEF AENGALSDWLHGGGATLVWKQRVQAAFDVADGLNYLHHYTNPPCVHKNLKSSNVLLDA NLRAKVSSFALARSVPTGADGGDAQLTRHVVGTQGYLAPEYLEHGLITPKLDVFAFGV ILLELLSGKEAMFNGGDKRGETLLWESAEGLVVDNEDARGKVRPFMDPRLHGDYPLDL AVAVASLAVRCVAREPRRRPSIDVVFATLSAVYNSTLDWDPSDDGNSRSSIVGR" BASE COUNT 448 a 836 c 724 g 449 t ORIGIN 1 ggcatctttt ttccgaaatg gaagactcga agacgactga aaagattgac ccgtcttcta 61 gctccagctg tagtctacgc tctgcagcaa ccacccactg gaaagaggaa accagagcca 121 cctttaattc cgtccgtccg tcgtaccgcc gcatacccgg gccgagaacg ccggccacag 181 tgccacactc ccaccccggt ccgtcccccg aagcaatggc cgctccgccg ggcagacggg 241 ggctcgcctt cggcacggcg gcgctcgcgc tcctcgccat cctcgccgtc gcgcgagggc 301 agcagcagta cgaggccaac gcgcagacca actgctacgg cagaaacgga agctccgtgc 361 tcggctacgt ctgcaacgcc accgccgcgg ccgccccctg cgccacctac gtcgtcttcc 421 gctcctcccc gccgtactac ggtacggccg tctctatctc ctacctcctc ggctccgatc 481 cggaagccgt cgcggacgcc aacggcgttc caaccgtctc cccgctcgcc gactcccgcc 541 tcgtgctcgc gccggtcccg tgcggctgct ctccgcgcgg ctactaccag cacaactcca 601 gccacaccat cgagctacgc ggcgagacct acttcatcat cgccaacaac acctaccagg 661 gcctcaccac ctgccaggcg ctcctcgcgc agaacccaag gcacggcagc cgcgacctcg 721 tcgccgggaa caacctcacc gtgccgattc gctgcgcgtg ccccacgccg gcacaggccg 781 ccgctggggt caggcacctg ctcacctacc tcgtcacgtg gggcgacagc gtctcggcca 841 tcgccgatcg cttccgtgtc gacgcccagg ccgtgttcca ggctaacaac ctcaccgcta 901 gagagatcat attccccttc accactctgc tcataccgct caagagcgcg cccacgccgg 961 acatgctcgt gtcgcctgcg ccgccgcccg cacccgcgcc gccgcaggcc cagcagccgc 1021 cggcgtccgg cagcgggaag tggattgccg tcggggtcgg tgttggtgtc ggcgttcttg 1081 cgctggcgag tcttattggc ctgatgttgt tatgtgtccg ccggcggcgg acacggcaag 1141 gcgttaggga aaggggccgt ttgagcaagg tggttctcga cgtgccctcg tcggcggatt 1201 acaacgctct tgcctcgggc aagcatgcat cgtcggctac gacgacctcc gcatcttcat 1261 cggcgttggt gtccagcgat gcgcgcgccg cggtggagtc cctgaccgtg tacaagtact 1321 cggaactcga gaaggcgaca gctggtttct cggaggaccg gagggtcaag aacgcgtccg 1381 tgtaccgcgc ggagatcaac ggcgacgcgg cggccgtgaa gcgggtggcc ggcgatgtga 1441 gcggcgaggt gggcatcctg aagcgtgtga accactccag cctcgtccgc ctgtctggtc 1501 tctgcgtcca ccacggcgaa acctacctcg tgttcgagtt cgccgagaac ggcgcgctca 1561 gcgactggct ccacggcggc ggcgccaccc tcgtgtggaa gcagcgcgta caagcggcct 1621 tcgacgttgc cgacggcctc aactacctcc atcattacac caacccgccg tgcgtgcaca 1681 agaacctcaa gagcagcaat gtcctcctcg acgccaacct ccgcgccaag gtgtcaagct 1741 tcgcgctagc gcggtcagtc cccaccggcg ctgatggcgg cgacgcgcag ctcacccgcc 1801 acgtcgtggg cacccagggg tacctggccc cagagtacct ggagcatggc ctcataacgc 1861 ccaagctcga cgtttttgcc ttcggcgtca tcctcctcga gctgctgtcc gggaaggagg 1921 cgatgttcaa cggcggcgac aaacgagggg agacgctgct gtgggagtca gcggagggac 1981 tggtcgtgga caacgaggac gcacgcggca aggtgcggcc gttcatggac ccgcggctgc 2041 acggcgacta cccgctggac cttgccgtcg ctgtggcgtc gctggcggtg cggtgcgtgg 2101 cgagggagcc caggaggcgg ccgtccatag acgtggtgtt cgcgacgctg tcagcggtgt 2161 acaactccac gctggactgg gatccctcgg atgacggcaa ctctcgctct tcgatcgtcg 2221 ggagatagta ttacagagca aaatcacttt atgtgtaagc gagagtgaag aacccatgta 2281 tgtatattta tttatttatt ttagtcgtga cagtactatt aaatttgttc aacataatta 2341 taaatcagtt gctggatgct cggcagagac cgtggcgcat ggctgctacg aagcgtctat 2401 tttaaacctt gtatttgtag atgaggttga aatcaaatcc taaactttaa atccctg //