LOCUS AK369602 1693 bp mRNA linear PLN 20-MAY-2011
DEFINITION Hordeum vulgare subsp. vulgare mRNA for predicted protein,
complete cds, clone: NIASHv2094E07.
ACCESSION AK369602
VERSION AK369602.1
KEYWORDS FLI_CDNA; CAP trapper.
SOURCE Hordeum vulgare subsp. vulgare (domesticated barley)
ORGANISM Hordeum vulgare subsp. vulgare
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.
REFERENCE 1 (bases 1 to 1693)
AUTHORS Matsumoto,T., Kanamori,H. and Tanaka,T.
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2010) to the DDBJ/EMBL/GenBank databases.
Contact:Takashi Matsumoto
National Institute of Agrobiological Sciences, Division of Genome
and Biodiversity Research; Kannondai 2-1-2, Tsukuba, Ibaraki
305-8602, Japan
REFERENCE 2
AUTHORS Matsumoto,T., Tanaka,T., Sakai,H., Amano,N., Kanamori,H.,
Kurita,K., Kikuta,A., Kamiya,K., Yamamoto,M., Ikawa,H., Fujii,N.,
Hori,K., Itoh,T. and Sato,K.
TITLE Comprehensive Sequence Analysis of 24,783 Barley Full-Length cDNAs
Derived from 12 Clone Libraries
JOURNAL Plant Physiol. 156, 20-28 (2011)
COMMENT This clone was obtained at our laboratory
Please visit our web site
URL: http://barleyflc.dna.affrc.go.jp/hvdb/index.html
FEATURES Location/Qualifiers
source 1..1693
/clone="NIASHv2094E07"
/clone_lib="Normalized and subtracted barley full-length
cDNA library from seedling shoot and root in salt
treatment or abscission"
/cultivar="Haruna Nijo"
/db_xref="taxon:112509"
/dev_stage="seedling"
/mol_type="mRNA"
/organism="Hordeum vulgare subsp. vulgare"
/sub_species="vulugare"
/tissue_type="shoot and root"
CDS 123..1292
/codon_start=1
/product="predicted protein"
/protein_id="BAK00803.1"
/translation="MSSFAGVSVVEDGKLSFATASTVRTSADCGYHLLVVHGYSRTKK
RGRTFNGTISYSFMLEGDSRTKKCEPRFYGIKSRPFMVGGRWWIVEYYPNGVDSDFAN
FISVDLHCVPDEANEEHVEAKFALSFVDEVEIQNPVYLAQREACNLSDATSWSSDRFI
RRDNLELSGNLKDDSFTIRCDIMVSSCNPNGDAAATKVLLPHMCQHFEDLLHTEVGAD
VKFEVSGETVAAHWCVLAARSKVFMSQLFGPMKEGTTKPAVIQIKDMKATVFRALLSF
IYTDSFPEMEDGGMDEDGMSQGVEQGQEKETALAKDEMRLQWLQSLLAAADRYDVQRL
KFFCGKRLSEEISMSSVVSTLALAQQHHCHGLEQACFKLCGRLGIFIRGGRVVHA"
BASE COUNT 372 a 471 c 442 g 408 t
ORIGIN
1 ggcagccccc cagacccgca gccacccaag aaccggcggc gcaaaccccc tctccttccg
61 gcgcgtgctg cggcgcaaga ggaccaacgc cggcgcaaga gaaccaggca ggcaggttgg
121 ccatgtcgtc gttcgccggc gtatcagtgg tggaggacgg caagctatcc ttcgccaccg
181 cgtcgaccgt ccgtaccagc gcagactgcg ggtaccacct gctcgtggtc cacggctact
241 cgcgcaccaa gaaacgcgga cgcacgttca atggcaccat atcttattct ttcatgctgg
301 aaggcgactc gcgcaccaag aaatgcgaac ccaggttcta tggcatcaaa tctcgtcctt
361 tcatggtggg aggccgttgg tggatcgtcg agtactaccc caatggtgtc gactccgact
421 ttgccaactt catttctgtc gatcttcact gtgtcccaga cgaggccaac gaggagcatg
481 tggaagccaa gtttgctctt agtttcgtcg acgaggtcga gattcagaat ccagtctacc
541 ttgctcaacg ggaagcatgc aacctcagtg atgctacttc ttggagcagc gacaggttta
601 tcagaagaga caaccttgaa ctatcaggga acctaaagga tgattctttc accatccgct
661 gcgacatcat ggtctcctcc tgcaacccca atggtgatgc cgctgccacc aaggtgctcc
721 tgcctcatat gtgccagcac tttgaagatc tccttcatac cgaggtgggt gctgacgtga
781 aattcgaggt cagcggcgag acggtggctg cccactggtg tgtgctcgca gcccggtcca
841 aggtcttcat gtcgcagctc tttggcccca tgaaggaggg cactaccaag ccagctgtca
901 tacagatcaa agacatgaag gcaacagttt tcagggcttt gcttagcttc atctacacgg
961 actcatttcc cgagatggag gatggtggca tggacgagga cggaatgtca caaggtgtgg
1021 agcaaggaca agaaaaggag acggcattag caaaggatga aatgcgactg caatggctgc
1081 aaagcttgct tgcagcggca gacagatatg atgtccaacg gctcaagttc ttttgtggaa
1141 agcgcttgtc tgaagaaata agcatgagtt cggtggtgtc cactcttgct ctagcccagc
1201 agcaccactg ccacgggtta gaacaggcgt gcttcaagtt atgtggccgg cttggtattt
1261 ttatacgtgg agggagagtt gtccatgctt agtgaaacca ccacaccgct ttagtcaaaa
1321 tacttatccc cgtctcctat ctctctccct ctctcccggc ctctcccaaa tctttctccc
1381 aacatcggca tggcggcggt aatgggacat ggcggcggta atgggacggt gcggctgcgg
1441 gccctcgtct cttgcccctt tccttagcag cacctttcct cccccctcgc cgagcacgga
1501 gccagcggcc tgcctgcgcc ggattgagtg ttgctctatt ttcatgcatg ctttcatgtt
1561 tgaaccctat gtgttgaacc ttgttccctt gcgtgttatc tgactataaa attcactatt
1621 atgtacttta agaacctatt atgcatcttt tgacgtgaac tttaatggga actcttagtg
1681 atgtttgtat ttt
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