LOCUS AK367335 1777 bp mRNA linear PLN 20-MAY-2011
DEFINITION Hordeum vulgare subsp. vulgare mRNA for predicted protein,
complete cds, clone: NIASHv2055E07.
ACCESSION AK367335
VERSION AK367335.1
KEYWORDS FLI_CDNA; CAP trapper.
SOURCE Hordeum vulgare subsp. vulgare (domesticated barley)
ORGANISM Hordeum vulgare subsp. vulgare
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.
REFERENCE 1 (bases 1 to 1777)
AUTHORS Matsumoto,T., Kanamori,H. and Tanaka,T.
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2010) to the DDBJ/EMBL/GenBank databases.
Contact:Takashi Matsumoto
National Institute of Agrobiological Sciences, Division of Genome
and Biodiversity Research; Kannondai 2-1-2, Tsukuba, Ibaraki
305-8602, Japan
REFERENCE 2
AUTHORS Matsumoto,T., Tanaka,T., Sakai,H., Amano,N., Kanamori,H.,
Kurita,K., Kikuta,A., Kamiya,K., Yamamoto,M., Ikawa,H., Fujii,N.,
Hori,K., Itoh,T. and Sato,K.
TITLE Comprehensive Sequence Analysis of 24,783 Barley Full-Length cDNAs
Derived from 12 Clone Libraries
JOURNAL Plant Physiol. 156, 20-28 (2011)
COMMENT This clone was obtained at our laboratory
Please visit our web site
URL: http://barleyflc.dna.affrc.go.jp/hvdb/index.html
FEATURES Location/Qualifiers
source 1..1777
/clone="NIASHv2055E07"
/clone_lib="Normalized and subtracted barley full-length
cDNA library from seedling shoot and root in salt
treatment or abscission"
/cultivar="Haruna Nijo"
/db_xref="taxon:112509"
/dev_stage="seedling"
/mol_type="mRNA"
/organism="Hordeum vulgare subsp. vulgare"
/sub_species="vulugare"
/tissue_type="shoot and root"
CDS 66..1562
/codon_start=1
/product="predicted protein"
/protein_id="BAJ98538.1"
/translation="MLEMKACTAIALVLVVAAQCAALATAAGPRVIIVGAGMSGISAG
KRLSEAGITDLVILEATDRIGGRIHKTKFAGVNVEMGANWVEGVNGDEMNPIWTMANG
TGGLNLRTFRSDFDHLASNTYKQDGGLYDEKVVENIIERMDEVEESGSKLSGTLHHSG
QQDMSVMAMQRLNDHMPSGPARPVDMVIDYYQHDFEFAEPPRVTSLQNTQPLPTFSDF
GDDVYFVADQRGYESVVYHVAGQYLKTDRKSGAIVDQRLKLNTVAREITYFPSGVAVR
TEDNKVYRADYVVVSASLGVLQTDLIRFKPQLPSWKIVSIYQFDMAVYTKIFLRFPKR
FWPEGPGKEFFLYASGRRGYFPVWQQFETQYPGSNVLLVTVTDDESRRIEQQSDNQTM
AEAVAVLRKMFPGKDVPDATEILVPRWWSNRFFKGSFSNWPIGVNRYEYDLIRAPVGR
VYFTGEHTSEKYNGYVHGAYLAGIDSADILINCAKNKMCKYDVKGKHD"
BASE COUNT 399 a 505 c 526 g 347 t
ORIGIN
1 gaccacaagc agctagctag caagtctcca agcttggtga gagagggaga gaaagaagga
61 gaaggatgct agagatgaag gcctgcacgg ccatagctct ggtgctcgtt gtagcagcac
121 aatgtgccgc cctggccacc gccgccggtc ccagagtcat catcgtcggc gccggcatgt
181 ccgggatctc tgctgggaag aggctgtccg aggctgggat cactgacctg gtgatcttgg
241 aggcgacgga ccgcatcgga gggcgcatcc acaagaccaa gttcgccggg gtgaacgttg
301 agatgggggc caactgggtg gaaggggtga acggagacga gatgaacccc atctggacca
361 tggccaatgg caccggaggt ctcaacctga ggaccttccg ctccgacttc gaccacctcg
421 ccagcaacac ctacaagcaa gacggtggcc tctacgacga gaaagttgtt gagaatataa
481 tcgagagaat ggatgaagtg gaggagagcg ggagcaagct ctccggcacc ttgcaccaca
541 gcggccagca ggacatgtct gtcatggcca tgcaacgcct caacgaccat atgccttcgg
601 gtccagctag gccggtggac atggtgatcg actactacca gcacgacttc gagttcgccg
661 agccgccgcg cgtgacgagc ctgcagaaca cgcagccgct gccaacgttc agcgacttcg
721 gcgacgacgt ctacttcgtg gccgaccagc gtgggtacga gtcggtggtg taccacgtcg
781 cggggcagta cctcaagacc gaccgcaagt ccggcgccat cgtcgaccaa aggctcaagc
841 tcaacacggt ggcacgggag atcacctact tcccgagcgg cgtcgcggtg aggaccgagg
901 acaacaaggt gtaccgggcc gactatgtcg tggtctccgc cagcctcggc gtcctccaga
961 ccgacctcat acggttcaag ccgcagctgc cgtcgtggaa gatcgtgtcc atctaccagt
1021 tcgacatggc cgtgtacacc aagatcttcc tcaggttccc caagaggttc tggccggagg
1081 gccccggcaa ggagttcttc ctctacgcca gcggccggag aggctacttc ccggtgtggc
1141 agcagttcga gacgcagtac ccggggtcca acgtgctgct cgtcaccgtc accgacgacg
1201 agtcgaggag gatcgagcag cagtccgaca accagaccat ggcggaggcg gtggcggtgc
1261 tcaggaagat gttccccgga aaagacgtgc cggacgccac cgagatcctc gtgccgaggt
1321 ggtggtccaa caggttcttc aagggctcct tctccaactg gcccatcggc gtcaaccgct
1381 acgaatacga cctcatccgg gcccccgttg gtagggttta cttcacgggc gagcacacga
1441 gcgaaaagta caacggatat gtccatggag cgtatcttgc aggtatcgac tctgctgaca
1501 tcctcatcaa ctgtgccaag aataagatgt gcaaatacga tgtcaaggga aagcatgact
1561 aatctcaagg ttaattaatc acggagtcac cagctgaaac gccagaagta acggggtgaa
1621 accgggtcag cgcgctccat tatttcggtg ttcatctgtg tcgggtcatt gttcaatggt
1681 tttcttgggc aatccatatt ttttttctcc ttgcgacatg ttttttgttt ggctcttttg
1741 cagctgttct cacttaatta ttattcataa aacttct
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