LOCUS AK361446 1364 bp mRNA linear PLN 20-MAY-2011
DEFINITION Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial
cds, clone: NIASHv1140L03.
ACCESSION AK361446
VERSION AK361446.1
KEYWORDS FLI_CDNA; CAP trapper.
SOURCE Hordeum vulgare subsp. vulgare (domesticated barley)
ORGANISM Hordeum vulgare subsp. vulgare
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.
REFERENCE 1 (bases 1 to 1364)
AUTHORS Matsumoto,T., Kanamori,H. and Tanaka,T.
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2010) to the DDBJ/EMBL/GenBank databases.
Contact:Takashi Matsumoto
National Institute of Agrobiological Sciences, Division of Genome
and Biodiversity Research; Kannondai 2-1-2, Tsukuba, Ibaraki
305-8602, Japan
REFERENCE 2
AUTHORS Matsumoto,T., Tanaka,T., Sakai,H., Amano,N., Kanamori,H.,
Kurita,K., Kikuta,A., Kamiya,K., Yamamoto,M., Ikawa,H., Fujii,N.,
Hori,K., Itoh,T. and Sato,K.
TITLE Comprehensive Sequence Analysis of 24,783 Barley Full-Length cDNAs
Derived from 12 Clone Libraries
JOURNAL Plant Physiol. 156, 20-28 (2011)
COMMENT This clone was obtained at our laboratory
Please visit our web site
URL: http://barleyflc.dna.affrc.go.jp/hvdb/index.html
FEATURES Location/Qualifiers
source 1..1364
/clone="NIASHv1140L03"
/clone_lib="Normalized barley full-length cDNA library
from seedling shoot at low temperature"
/cultivar="Haruna Nijo"
/db_xref="taxon:112509"
/dev_stage="seedling"
/mol_type="mRNA"
/organism="Hordeum vulgare subsp. vulgare"
/sub_species="vulugare"
/tissue_type="shoot"
CDS 126..>1364
/codon_start=1
/note="Stop codon is not identified"
/product="predicted protein"
/protein_id="BAJ92652.1"
/translation="MAVAEWTRGPAIGRGSSATVSIAVDRRTDGVLAVKSVGADRAAE
LRRERAILRGLSSPYVVRCLDAEAGTGLDMLMEYAPGGSLADEIRRCGGRCAEGLVRS
RVRDILRGLAHVHAAGVAHCDVKARNVLIGADGRALIADFGCARIAAGEGRLPTGGTP
MFMAPEAARGEEQGPAADIWAVGCTVIEMATGAGPWQRFASPVATLHHVAFSGEAPEL
PPCLSDLGRDFLARCLQQDPSERWTAEQLLEHEFVAVDPSVASTSNSVPGVTEEKATF
VSPKSVLGQDLWDDDEDDTTADPTDRVRALAAGAPAVPDWTWDASWITVHAGPSGDEP
TMPPEQPEAGAEAVSMDSPVGDGGSAGGAGAWNSSQQASHGNGDGYDGTGSCNGERSD
DGNHVVSDCTVPITGNGFFSD"
BASE COUNT 203 a 485 c 494 g 182 t
ORIGIN
1 gcccaaaccg caacgcctgc tgctactgct cgcccgcacc ccaaattcca attgcgtcct
61 cccggcagca acaaccggac agaccgcacg ccaccgtcca gagccattct tgcgggctgc
121 aagaaatggc cgtcgcggag tggacgcgcg gcccggcgat cggcaggggc tcctccgcca
181 cggtgtcgat cgccgtcgac cgccgcacgg acggggtcct cgcggtcaag tccgtgggcg
241 ccgaccgggc cgccgagctc cggcgggagc gcgccatcct ccgcggcctc agctcgccct
301 acgtcgtgcg ctgcctggac gccgaggccg ggaccggcct cgacatgctc atggagtacg
361 cgcctggcgg gtcgctggcc gacgagatca ggcggtgcgg cggccggtgc gccgagggcc
421 tcgtccggtc ccgcgtgcgc gacatcctgc gcgggctcgc gcacgtgcac gccgccggcg
481 tcgcgcactg cgacgtcaag gcccggaacg tgctcatagg cgccgacggc cgcgccctca
541 tcgccgactt cggatgcgcg cgcattgctg ccggcgaggg gcggctgccc acgggcggca
601 cgcccatgtt catggcgccg gaggccgcgc ggggcgagga gcagggcccg gcggccgaca
661 tatgggccgt cgggtgcacc gtcatcgaga tggccaccgg cgccgggccc tggcaacggt
721 tcgccagccc cgtcgcgacg ctgcaccacg tcgcgttctc cggcgaggcg ccggagctcc
781 ccccgtgcct gtcggacctg ggcagggact tcctggcgag gtgccttcag caggacccca
841 gcgagcggtg gactgcggag cagctgctgg agcacgagtt cgtggccgtc gacccctccg
901 tcgcctccac gtccaattcc gtgccaggtg tcacggagga gaaggctacg ttcgtgtccc
961 ccaagagcgt cctcggtcag gacctgtggg acgacgacga ggacgacacg acggcggatc
1021 ccacggacag ggtgcgcgcg ctggccgcgg gcgcgccggc agtgccggac tggacctggg
1081 acgcgagctg gatcacggtc cacgccggcc ccagcggcga cgagccaaca atgccgccgg
1141 agcagccgga ggcgggcgcg gaggccgtca gcatggattc gcccgtgggc gacggcggct
1201 ccgctggtgg tgcgggggcc tggaacagca gccagcaggc ctcacatggc aatggcgacg
1261 gctacgatgg cacgggcagc tgtaatggcg agcgcagcga tgatggtaat cacgtggtta
1321 gcgattgtac cgtcccaatc acaggcaatg gattcttttc cgat
//