LOCUS AK360735 1535 bp mRNA linear PLN 20-MAY-2011
DEFINITION Hordeum vulgare subsp. vulgare mRNA for predicted protein,
complete cds, clone: NIASHv1124F12.
ACCESSION AK360735
VERSION AK360735.1
KEYWORDS FLI_CDNA; CAP trapper.
SOURCE Hordeum vulgare subsp. vulgare (domesticated barley)
ORGANISM Hordeum vulgare subsp. vulgare
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.
REFERENCE 1 (bases 1 to 1535)
AUTHORS Matsumoto,T., Kanamori,H. and Tanaka,T.
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2010) to the DDBJ/EMBL/GenBank databases.
Contact:Takashi Matsumoto
National Institute of Agrobiological Sciences, Division of Genome
and Biodiversity Research; Kannondai 2-1-2, Tsukuba, Ibaraki
305-8602, Japan
REFERENCE 2
AUTHORS Matsumoto,T., Tanaka,T., Sakai,H., Amano,N., Kanamori,H.,
Kurita,K., Kikuta,A., Kamiya,K., Yamamoto,M., Ikawa,H., Fujii,N.,
Hori,K., Itoh,T. and Sato,K.
TITLE Comprehensive Sequence Analysis of 24,783 Barley Full-Length cDNAs
Derived from 12 Clone Libraries
JOURNAL Plant Physiol. 156, 20-28 (2011)
COMMENT This clone was obtained at our laboratory
Please visit our web site
URL: http://barleyflc.dna.affrc.go.jp/hvdb/index.html
FEATURES Location/Qualifiers
source 1..1535
/clone="NIASHv1124F12"
/clone_lib="Normalized barley full-length cDNA library
from seedling shoot in normal or dark"
/cultivar="Haruna Nijo"
/db_xref="taxon:112509"
/dev_stage="seedling"
/mol_type="mRNA"
/organism="Hordeum vulgare subsp. vulgare"
/sub_species="vulugare"
/tissue_type="shoot"
CDS 115..1380
/codon_start=1
/product="predicted protein"
/protein_id="BAJ91943.1"
/translation="MFGRGPPKKSDSTRYYEILGVPKDASQDDLKKAYRKAAIKNHPD
KGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGMHDPFDIFQSFFGGG
GNPFGGGGSSRGRRQRRGEDVVHPLKVSLEELYNGTSKKLSLARNVLCSKCNGKGSKS
GASMKCAGCQGAGYKVQIRQLGPGMIQQMQQPCNECRGSGETISDKDRCGQCKGEKVV
HEKKVLEVVVEKGMQHGQKITFPGEADEAPDTVTGDIIFVLQQKEHPKFKRKADDLFY
EHTLTLTEALCGFQYVLAHLDGRQLLIKSNPGEVVKPDSFKAINDEGMPMYQRPFMKG
KLYIHFTVVFPDSLSLDQCKALETVLPPKPASQYTDMELDECEETMAYDIDIEEEMRR
QQQQQAQEAYDEDEDMPGGGGQRVQCAQQ"
BASE COUNT 367 a 394 c 467 g 307 t
ORIGIN
1 ggcaaaccga tcccaccggc gaccccgtcc cccaccggat caaccagcta gggtttcgtc
61 cccttcgtct tctccgccga gcttggaggg ttcgcgctca tcgcctgagg cgagatgttc
121 ggccgcgggc cgccgaagaa gagcgacagc acgcgctact acgagatcct gggcgtgccc
181 aaggacgcgt cccaggacga cctcaagaag gcctaccgca aggccgccat caagaaccac
241 cccgacaagg gcggcgaccc cgagaagttc aaggaactag ctcaggctta tgaggtcctg
301 agtgatcctg agaagcgaga gatctatgat cagtatggtg aggatgccct caaggaggga
361 atgggaggcg gtggaatgca tgatccattt gacatcttcc aatcattctt tggtggtggt
421 ggcaacccct ttggaggtgg tggcagcagc aggggcaggc gtcagcgcag gggtgaggat
481 gtggttcatc ctctgaaggt tagccttgag gagttgtaca atggaacatc gaagaaactc
541 tctcttgccc gcaatgtgct ctgctcaaag tgcaatggca agggttcaaa gtctggagct
601 tccatgaagt gtgccggctg ccaaggtgct ggttacaagg tccagatcag gcagctggga
661 ccaggaatga tacagcaaat gcagcagccc tgcaatgagt gcaggggaag tggtgagacc
721 atcagtgata aggatcgttg cgggcagtgc aagggtgaga aggtggttca cgagaagaaa
781 gtcctggagg tggtggtcga gaagggtatg cagcatggac agaagatcac cttccctggc
841 gaggcagatg aagcgcctga taccgtcact ggagacataa tcttcgtcct ccagcagaag
901 gagcacccca aattcaagcg gaaggctgac gacctcttct atgagcacac cctgaccctg
961 acggaggccc tctgtggctt ccaatatgtc ctagctcatt tggatggcag acagctgctc
1021 atcaagtcca accccgggga agttgtcaag cctgattcat tcaaggcgat caacgacgag
1081 ggcatgccca tgtaccagag gcccttcatg aagggcaagc tctacatcca cttcacggtg
1141 gttttccccg actcgctgag cttggaccag tgcaaggccc tcgagacggt cctcccgccc
1201 aagccggcat cgcagtacac agacatggag ctagacgagt gcgaggagac gatggcctac
1261 gatatagaca ttgaggaaga gatgcggagg caacagcagc agcaggcgca ggaggcctat
1321 gacgaggacg aggatatgcc gggcggcggc gggcagaggg tgcagtgcgc ccagcagtag
1381 tcaggcagga tgttgtgatc gtcagtgagc agatgaattc gtttctgtcc ttctcaagtt
1441 ttccatgtta gggttcttac ccttttggtg ctagtatatg atatattaac tacttgaaca
1501 aatgccgctt cttcccggaa aattatttgc gttct
//