LOCUS AK289268 2263 bp mRNA linear PLN 16-FEB-2008
DEFINITION Oryza sativa Japonica Group cDNA, clone: J100090H24, full insert
sequence.
ACCESSION AK289268
VERSION AK289268.1
KEYWORDS FLI_CDNA; CAP trapper.
SOURCE Oryza sativa Japonica Group (Japanese rice)
ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE 1 (bases 1 to 2263)
AUTHORS Kikuchi,S., Adachi,J., Aizawa,K., Akimura,T., Arakawa,T.,
Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A.,
Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N.,
Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y.,
Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y.,
Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H.,
Kawagashira,N., Kawai,J., Kawamata,M., Kishikawa-Hirozane,T.,
Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y.,
Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T.,
Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T.,
Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M.,
Nagata,T., Nakahama,Y., Nakamura,M., Namiki,T., Narikawa,R.,
Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M.,
Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R.,
Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D.,
Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T.,
Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K.,
Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y.,
Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M.,
Yasunishi,A., Yazaki,J., Yokomizo,S., Yoshimura,A., Eguchi,K.,
Kanamori,H., Yamagata,H., Kamiya,K., Kurita,K., Kikuta,A. and
Bito,T.
TITLE Direct Submission
JOURNAL Submitted (04-SEP-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Shoshi Kikuchi
National Institute of Agrobiological Sciences, Division of Genome
and Biodiversity Research; 2-1-2 Kannondai, Tsukuba, Ibaraki
305-8602, Japan
REFERENCE 2
AUTHORS Kikuchi,S.
TITLE Oryza sativa full length cDNA
JOURNAL Published Only in Database(2007)
COMMENT This clone is one of the 1.9K full-length cDNA clones from
japonica rice.
URL:http://cdna01.dna.affrc.go.jp/cDNA/
NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.,
Yamamoto,M. and Nakahama,Y.
NIAS STAFF Institute Sequence group: Eguchi,K., Kanamori,H.,
Yamagata,H., Kamiya,K., Kurita,K., Kikuta,A. and Bito,T.
FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
Yoshimura,A., Matsubara,K. and Murakami,K.
Genome Exploration Research Group in Riken Genomic Sciences Center
and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
Yasunishi,A. and Hayashizaki,Y.
FEATURES Location/Qualifiers
source 1..2263
/clone="J100090H24"
/cultivar="Nipponbare"
/db_xref="taxon:39947"
/mol_type="mRNA"
/organism="Oryza sativa Japonica Group"
BASE COUNT 679 a 435 c 543 g 606 t
ORIGIN
1 accaacttaa atgaaaatcg agggttaggt ttttttttca gaatttctaa gattttatct
61 attttgttag agtgctatgt agcagcttga gagcgttttc agagcaccac gtggcggcat
121 gagagcgttt gtatgaagtt taatagactt ttatataata ataataataa taataataat
181 aataataata ataataataa taataataat agaaagaata gaatagaaat tatgatgtgg
241 atctaattag aaaaaaaaag aatgggggag gaactggatt gtgcacatgg aggcaaacgt
301 acctgctacg tacgtaggca cgtgtggggc cagccaggag ggttgggcga agggagttta
361 gtttttaagg atttttttct gatttattag ggtgtcaata caactaatct aatctaatgg
421 tataaattat cgggtccacc gatttaagtg aaaatcaatg gtgagattag atattgccac
481 atggcggtct aggagcgatt gtagaagtgc cacatagcgg cttgagagcg tttgtaggaa
541 gtttaataga cttttagtat ataataatag atagattcac atgcccgtac ctcgtcaggc
601 ccatactagc aattgaaaat ataacaaaat acgaggagga aaatagagtt acttctgacg
661 ggccgtaacc aaaactcatc acaggtgagg gtcgtctctc acagggtaga tattttaacc
721 cgtcacgggt tacttttatc tataacggat cataataagg aatcgtcact tttgtggaag
781 gggggaaata atttcatgca actgtccatc atagctgtat attacaattt gaaaaaaaaa
841 tacaaaaata ttgtccgcct agcttgccat cacattcatt tgaacagtca ttgaccactc
901 acaaatcaca aaaatcttta taatcacaca gctgagtatt ccaaacactt attcatgggg
961 aataagaaaa tcaacaacat ggacaaataa gtatcacaca atttgtatgt atgccctgac
1021 aaacttcgag tggtccaaga acaaactatt ttctgttctc caaacttcag aacaaaggtg
1081 ggaagaaggg aaaacacctc gatgagtcaa tggagatgga gacaacactg gtgtgcgcgt
1141 gccacctcgc tccgtggcgc actacctggg ccgcctcctc cttgacggtt ttgaggaact
1201 ccttggacta tgccaacgtc aacacctcca tcaccgtagt cgtcgttgtt gccaccaccg
1261 tgctcgctac aaccgtagtc gttgtagcag tcgtcgtact cattacagtt atcgctagtc
1321 gcccctgcca ctttgactgc cggcagatct ggctggcatt ggctcatgtg tggtcagatc
1381 tgatgcctct gacctcaggg aggccccatc tggcaccccc gaggtagcgg caaccagatc
1441 agatgggggc tggtgcatgg gaagggggtg aagagctagt cgtcagtgct tgatcaatag
1501 aggcagtggt ggcagcctgt ggagcttgag atggtagcgt cggtcggtgg tgcaaagtag
1561 gggtgggcat tcagtctaac tgaaaatttc ggcctcggtc ttcggtcttt cgggtcttta
1621 aaaagtgaag accgaactta aacgtaaaaa tgtcagtacc gataaattcg gtctcagtct
1681 tggtcctgac cgaaattcaa caacattttc atatatgcaa agaaataatg gacattttca
1741 acaaaaaatc acaaaaaaaa aatcgtaaac acatatgagt aaagactctt attaggttgc
1801 atgcctagaa gaaataggga tgtgaaaatt agagtttaat cctattgaat ttagtgtact
1861 gtaggttgca tttagatatt tttttgttaa ttcggtctat tcagttaacc aaggagacta
1921 accaaattaa ccgaacaaaa ttcggtcttt cactgcctag gaccgaattg atgactgaat
1981 ttctcggtct cggtcttttc ggtttggtgt ttttctgtcc acccctagtg caaaggtgtc
2041 caacggagct caagatggcc agcggtaggt ggagctcgac acaatggtgg ctaatggacg
2101 caaagccgct agcgagagag agaggagggt acttgttgct ggttagagag agagagatcc
2161 gtgtcactcg gcctcggtga aggccggatc cgacgacaag cggtcgaggg gcagagtagg
2221 cagtgcctgc ggtcatatcc acatcccccg acttcgtggg gac
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