LOCUS AK288558 2121 bp mRNA linear PLN 16-FEB-2008
DEFINITION Oryza sativa Japonica Group cDNA, clone: J090047H18, full insert
sequence.
ACCESSION AK288558
VERSION AK288558.1
KEYWORDS FLI_CDNA; CAP trapper.
SOURCE Oryza sativa Japonica Group (Japanese rice)
ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE 1 (bases 1 to 2121)
AUTHORS Kikuchi,S., Adachi,J., Aizawa,K., Akimura,T., Arakawa,T.,
Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A.,
Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N.,
Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y.,
Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y.,
Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H.,
Kawagashira,N., Kawai,J., Kawamata,M., Kishikawa-Hirozane,T.,
Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y.,
Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T.,
Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T.,
Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M.,
Nagata,T., Nakahama,Y., Nakamura,M., Namiki,T., Narikawa,R.,
Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M.,
Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R.,
Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D.,
Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T.,
Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K.,
Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y.,
Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M.,
Yasunishi,A., Yazaki,J., Yokomizo,S., Yoshimura,A., Eguchi,K.,
Kanamori,H., Yamagata,H., Kamiya,K., Kurita,K., Kikuta,A. and
Bito,T.
TITLE Direct Submission
JOURNAL Submitted (04-SEP-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Shoshi Kikuchi
National Institute of Agrobiological Sciences, Division of Genome
and Biodiversity Research; 2-1-2 Kannondai, Tsukuba, Ibaraki
305-8602, Japan
REFERENCE 2
AUTHORS Kikuchi,S.
TITLE Oryza sativa full length cDNA
JOURNAL Published Only in Database(2007)
COMMENT This clone is one of the 1.9K full-length cDNA clones from
japonica rice.
URL:http://cdna01.dna.affrc.go.jp/cDNA/
NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.,
Yamamoto,M. and Nakahama,Y.
NIAS STAFF Institute Sequence group: Eguchi,K., Kanamori,H.,
Yamagata,H., Kamiya,K., Kurita,K., Kikuta,A. and Bito,T.
FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
Yoshimura,A., Matsubara,K. and Murakami,K.
Genome Exploration Research Group in Riken Genomic Sciences Center
and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
Yasunishi,A. and Hayashizaki,Y.
FEATURES Location/Qualifiers
source 1..2121
/clone="J090047H18"
/cultivar="Nipponbare"
/db_xref="taxon:39947"
/dev_stage="after pollination"
/mol_type="mRNA"
/organism="Oryza sativa Japonica Group"
/tissue_type="embryo"
BASE COUNT 489 a 558 c 593 g 481 t
ORIGIN
1 ggaagtatcg cgcgcgcggc gtggacatgt gtagcttttc tcggctccac ctccgatccc
61 ctcgctctct cccctcccct cccatccccc accccctccc tcgtcgtcgt ccgcccgcgc
121 ccgcgcgcgc gccactgcca tcccaacacc ggagcaagcg aacgaacaaa ccacgacgcg
181 aggttgacgg ccgccgtgtc agcctagaac accggacacc tcacctgatc acctccccga
241 gaagccaagc tctagccagc cagccagcca gccgctcccc atggagatcg cgcgggtggt
301 cgcgccgcca ctgcgcctcg cgtggtgccc cgcgtcgagg cggtggggga ggaggaaggg
361 gaggcccccg tgtcccagct cgctgccggg gccgcgccac gaccacgccg tgaagaggcc
421 aggcggcgag gcggcgggcg ggaggagcgt caacggcgcc gctccggctc cagctcccgc
481 tcccgcggag gcgccggcga aggcgccgca gaggaggcag aggcgcgggc ctcatgacgt
541 ggaggacgag gcgtgggggc tgctccggga gtcggtggtg cgctactgcg gcagccccgt
601 gggcacgatc gccgcgtgcg accccaacga cgccagcccg ctcaactacg accaggtgtt
661 catccgggac ttcgtgccct cgggcatcgc cttcctgctc aagggggact acgagatcgt
721 ccgcaacttc atcctgcaca ccctccagct ccagagctgg gagaaaacga tggactgcca
781 cagtccaggt caagggttga tgccagcaag tttcaaggtg cgtgttgttc cacttgacgg
841 ggacgatgat gtaactgagg aagtcctgga tcctgatttc ggggaggctg caataggacg
901 tgtggcacca gttgattctg gtttatggtg gatcatattg ctgagagcat acggaaaatg
961 ttcaggcgat ctgtcggttc aggagagaat tgatgtccag actggaataa agatgatctt
1021 gaagctctgc ttagctgatg gcttcgacat gtttcccacc ttgcttgtta ctgatggctc
1081 atgcatgata gatcgtcgaa tgggaatcca tggacaccca ttggaaattc aggcactttt
1141 ctattcagct ctcttgtgtg cacgtgagat gcttacccca gaagatggat cagctgactt
1201 gattcgtgcc ctaaatagca ggcttattgc actctctttt catatcagag agtattattg
1261 gcttgacaag agaaagctaa atgagatata tcgatacaaa acagaggagt attcttatga
1321 cgctgtcaac aagtttaaca tatatccaga tcagattcct ccctggctgg ttgaatggat
1381 ccctcctaaa gggggttact tcattggaaa cctgcagcca gctcatatgg attttcggtt
1441 cttttctctt gggaacttgt ggtcaatagt aagtagtttg gcaacatccc accagtctga
1501 tgctattttg gatctggttg aagccaaatg gtctgattta gtggcggata tgccaatgaa
1561 gatatgctat cctgctcttg aggatcagga gtggaaattc attacaggga gcgaccctaa
1621 aaatacggct tggtcttacc ataatggagg ttcctggcca acactattgt ggcagctcac
1681 agtagcatgt atcaaggtgg accggtcaga gattgcagca aaagctgtgg aggttgctga
1741 gcgacgtatt gccaatgata aatggcctga atactacgat accaaacgtg cacgattcat
1801 cgggaagcag tctcggcttt ttcagacatg gaccattgcc ggttttctcg tggccaagca
1861 gctgttagaa aaccctgata aatcgagaat actgtggaac aacgaggatg aggaaattct
1921 caacgctatg aatcgcatga ctgatgcatc caatctgaag aggcggcgtg gcaggaaagg
1981 actcaagaag acttatattg tgtaagtcca gaaatagttt cggcctatcg tcatatgtgt
2041 agaatatgtt ataggaatga tgagttcttg ttgtacataa gtacattttt gaagatggaa
2101 acctaatctc acatttttgt c
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