LOCUS       AK243334                1204 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA, clone: J100058P16, full insert
            sequence.
ACCESSION   AK243334
VERSION     AK243334.1
KEYWORDS    FLI_CDNA; CAP trapper.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 1204)
  AUTHORS   Kikuchi,S., Adachi,J., Aizawa,K., Akimura,T., Arakawa,T.,
            Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A.,
            Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N.,
            Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y.,
            Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y.,
            Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H.,
            Kawagashira,N., Kawai,J., Kawamata,M., Kishikawa-Hirozane,T.,
            Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y.,
            Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T.,
            Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T.,
            Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M.,
            Nagata,T., Nakahama,Y., Nakamura,M., Namiki,T., Narikawa,R.,
            Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M.,
            Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R.,
            Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D.,
            Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K.,
            Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y.,
            Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M.,
            Yasunishi,A., Yazaki,J., Yokomizo,S., Yoshimura,A., Eguchi,K.,
            Kanamori,H., Yamagata,H., Kamiya,K., Kurita,K., Kikuta,A. and
            Bito,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2006) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Division of Genome
            and Biodiversity Research; 2-1-2 Kannondai, Tsukuba, Ibaraki
            305-8602, Japan
REFERENCE   2
  AUTHORS   Kikuchi,S.
  TITLE     Oryza sativa full length cDNA
  JOURNAL   Published Only in Database(2006)
COMMENT     This clone is one of the 2.6K full-length cDNA clones from
            japonica rice.
            URL:http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.,
            Yamamoto,M. and Nakahama,Y.
            
            NIAS STAFF Institute Sequence group: Eguchi,K., Kanamori,H.,
            Yamagata,H., Kamiya,K., Kurita,K., Kikuta,A. and Bito,T.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..1204
                     /clone="J100058P16"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /dev_stage="2 weeks seedlings"
                     /mol_type="mRNA"
                     /note="UVC irradiated (0.7min), 48hr after treatment"
                     /organism="Oryza sativa Japonica Group"
                     /tissue_type="root of seedling"
     misc_feature    1..1204
                     /note="mapping to R06-TIGRv4S1-001126R (Chr.6: short
                     arm=29365038, long arm=29369368, direction=reverse) for
                     TIGR Pseudomol ver4"
BASE COUNT          286 a          285 c          367 g          266 t
ORIGIN      
        1 ggatgcggcg gcgcacgtcg cgcccacggt cgaccacctc gccgcggtgg ccgccgaggc
       61 cgaggcgatg gcccgcttcg aggaggagca ccgcgccctg ggggcggagg aggagtatga
      121 ggaggaggag gatgagttgg aggaggagga ggaggagatg gaggaggatg aggacgcgca
      181 acatcatgag ggggtgggcg gcgaggtggc tgtcccgatg gacgcggagg ccgccgcgca
      241 gctggacccg cacggcggga tgctcgccgc ctccggcgct gtccagccca tggcgtccaa
      301 ccaactcacc ctctcgttcc agggcgaggt ctacgtcttc gactctgtct cccctgacaa
      361 ggttcaagca gtgctcttgc tactcggtgg aagggagctg aacccaggtt tgggctctgg
      421 agcatcgtca tctgcgccat acagtaagag gttgaatttt ccacaccggg tggcatcttt
      481 gatgcggttc agagaaaagc ggaaggagcg caactttgat aagaagatcc ggtattctgt
      541 tcggaaggaa gttgcactta ggatgcagcg caatagaggt cagtttacat cttcaaaacc
      601 aaagggtgat gaagcaacat cggaattgac agcttcagat ggctccccaa actggggatc
      661 agtggaaggt cggcctccct ctgctgctga atgccatcac tgtggtataa atgcaaaggc
      721 tacacctatg atgcgtcgtg gacctgatgg gccaagaaca ttatgcaatg cctgtggcct
      781 catgtgggca aacaagggga tgttgaggga cctatcaaaa gcacctccca cacctattca
      841 agttgtggca tcagttaatg atggtaatgg aagtgctgca gcacctacca ccgagcaaga
      901 aattcctgca ccagccactg tcaatggcca cgaatcatca acgtgagtat agcgatgttt
      961 gtcttgtgga ggatcgcgaa catcatgccg gcattatatc catgtagttt aactgtctgt
     1021 actataactt gatgagaacc tgttaggtac ctaggccatt tctttaccat catttagggt
     1081 ttgaatgttg ttctgcatat gttgtaagcc atgaaaaatc atgcttccgg tcattatggc
     1141 cgtagcaatt ttatttcttg ttagactctt gggtggaagt gagaacagag aaggtgatga
     1201 agcg
//