LOCUS AK242733 2029 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA, clone: J090047O22, full insert sequence. ACCESSION AK242733 VERSION AK242733.1 KEYWORDS FLI_CDNA; CAP trapper. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 2029) AUTHORS Kikuchi,S., Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakahama,Y., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S., Yoshimura,A., Eguchi,K., Kanamori,H., Yamagata,H., Kamiya,K., Kurita,K., Kikuta,A. and Bito,T. TITLE Direct Submission JOURNAL Submitted (10-OCT-2006) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Division of Genome and Biodiversity Research; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS Kikuchi,S. TITLE Oryza sativa full length cDNA JOURNAL Published Only in Database(2006) COMMENT This clone is one of the 2.6K full-length cDNA clones from japonica rice. URL:http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Yamamoto,M. and Nakahama,Y. NIAS STAFF Institute Sequence group: Eguchi,K., Kanamori,H., Yamagata,H., Kamiya,K., Kurita,K., Kikuta,A. and Bito,T. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..2029 /clone="J090047O22" /cultivar="Nipponbare" /db_xref="taxon:39947" /dev_stage="after pollination" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" /tissue_type="embryo" CDS 465..1784 /db_xref="Osa1:LOC_Os12g02200" /note="(Rice Genome Annotation Project) CBL-interacting serine/threonine-protein kinase 15, putative, expressed" /note="mapping to R12-TIGRv4S1-000040R (Chr.12: short arm=678078, long arm=681143, direction=reverse) for TIGR Pseudomol ver4" /protein_id="BAH01328.1" /translation="MESRGKILMERYELGRLLGKGTFGKVHYARNLESNQSVAIKMMD KQQVLKVGLSEQIRREITTMRLVAHKNIVQLHEVMATRNKIYFVMEYVKGGELFEKVA KRGKLTEVVAHKYFQQLISAVDYCHSRGVYHRDLKPENLLLDENENLKVSDFGLSALS ESKRQDGLLHTTCGTPAYVAPEVISKIGYDGAKSDIWSCGVILFVLVAGYLPFQGPNL MEMYRKIQHGEFRCPGWFSRKLQKLLYKIMDPNPSTRISIQKIKESTWFRKGPEENRI LKERTLNENTTKNVALVLGVRRKKNAHEDVKPMSVTNLNAFEIISFSKGFDLSGMFIV KEWRNEARFTSDKSASTIISKLEDVAKALNLRVRKKDNGVVKMQGRKEGRNGVLQFDI EIFEVTTSYHIIEMKQTSGDSLEYRQLLEEGIRPALKDIVLAWHGDE" BASE COUNT 599 a 365 c 510 g 555 t ORIGIN 1 ggcatccact ccacatacta ccactcaaaa actctctctc tctacccaaa caggttttga 61 gaaagaagtg gaggacagat ccaaaaagtt caccttttga ttatccaaac aagtttggag 121 tttgttacct gaatctcctc ttcttcctgt caccggaagg gaaattgata aaaaaaaagc 181 agtgaaagcc tcaaggaatg ctgaaagatg tgcttgcata gaagaaattt tccgtgtgag 241 ataaagcaga ttgctggttc actagtgcta ctgatctgct caagtcttga tgtgagtgat 301 caactttcct gcactaattc tacaccattt agactccgaa acgacgatga tataagaatg 361 ttgttctcca ttcatgatca tgaccttggg gaggatggct aaagaattgc agtccatctg 421 attggtggtc aaaacatagt gctgagattt atatctttgt gggcatggag agtagaggga 481 agatactaat ggagaggtat gagttgggca gattgttggg gaaaggaaca tttggcaagg 541 tgcactatgc aaggaatctg gagtcaaacc agagtgtggc cataaagatg atggacaaac 601 agcaggtgtt gaaggtcggg ctttcggagc agatcagacg tgagatcaca accatgcggt 661 tggtggctca taagaacatt gttcagcttc atgaggtcat ggcaacacgg aacaagatct 721 actttgtgat ggagtatgtg aaaggtggtg agctatttga aaaggttgca aagcgtggaa 781 agcttacaga ggttgttgca cataagtact tccagcaact cattagtgca gtggattact 841 gccacagtcg aggtgtgtat caccgggact tgaagcctga aaacctgctg ttggatgaga 901 atgagaacct gaaagtctca gactttggac tgagtgcgct ttcagagtcg aagaggcaag 961 atggcttact ccataccacc tgtggaacac ctgcatatgt agctccagag gtgatcagca 1021 agataggata tgatggtgca aagtcagata tttggtcttg tggtgttatc ctgtttgttc 1081 ttgttgctgg ttaccttcct ttccagggcc caaacttgat ggaaatgtat cggaagatac 1141 aacatggtga attcaggtgc cccggttggt tttcacgcaa acttcagaag ttgttgtaca 1201 agatcatgga ccccaaccca agcacaagga tttcaatcca gaagataaag gagtctacct 1261 ggttccggaa aggtcctgag gagaatcgta ttttgaagga aagaactttg aatgaaaaca 1321 ccaccaaaaa cgttgctctg gtgcttggtg tgagacgcaa gaaaaatgct catgaagatg 1381 tgaagcccat gtcagtgaca aacttaaatg cctttgaaat tatctctttc tccaaggggt 1441 ttgatctctc tggcatgttc attgtaaagg aatggagaaa tgaggcaagg ttcacttcag 1501 ataaatctgc ctcaaccata atctcaaagc tagaagatgt agcaaaggcg ctaaatctca 1561 gggtaaggaa gaaagacaat ggtgtagtga agatgcaagg gaggaaggag ggaaggaatg 1621 gtgttcttca gtttgacata gagatatttg aggttaccac ttcctatcat atcatcgaga 1681 tgaaacaaac aagtggcgat tcattggagt accgacagct actggaggag ggcatccggc 1741 cagctctgaa ggacattgtc ttggcctggc atggagatga atagcagcag tcgcaagagt 1801 agattttgat gtctcaagca tttagtttcc gctcctcaaa ttcattaggt tttagctcaa 1861 atgaatttat ttgtcttgcc tatgttcttt ttagcatcta tgtttttgta tctggagagt 1921 tcatgttgag gcaatctatg cacaatttag atggagtctg tcgagagtaa ttttatgaga 1981 agttgagctg caatataaaa gttggctttg agcctttcaa gctttcttc //