LOCUS AK242299 815 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA, clone: J075192I02, full insert sequence. ACCESSION AK242299 VERSION AK242299.1 KEYWORDS FLI_CDNA; CAP trapper. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 815) AUTHORS Kikuchi,S., Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakahama,Y., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S., Yoshimura,A., Eguchi,K., Kanamori,H., Yamagata,H., Kamiya,K., Kurita,K., Kikuta,A. and Bito,T. TITLE Direct Submission JOURNAL Submitted (10-OCT-2006) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Division of Genome and Biodiversity Research; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS Kikuchi,S. TITLE Oryza sativa full length cDNA JOURNAL Published Only in Database(2006) COMMENT This clone is one of the 2.6K full-length cDNA clones from japonica rice. URL:http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Yamamoto,M. and Nakahama,Y. NIAS STAFF Institute Sequence group: Eguchi,K., Kanamori,H., Yamagata,H., Kamiya,K., Kurita,K., Kikuta,A. and Bito,T. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..815 /clone="J075192I02" /cultivar="Nipponbare" /db_xref="taxon:39947" /dev_stage="30 days after pollination" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" /tissue_type="pistil" CDS 131..583 /db_xref="Osa1:LOC_Os01g04370" /note="(Rice Genome Annotation Project) 16.9 kDa class I heat shock protein 1, putative, expressed" /note="mapping to R01-TIGRv4S1-000118R (Chr.1: short arm=1945574, long arm=1946389, direction=reverse) for TIGR Pseudomol ver4" /protein_id="BAH01253.1" /translation="MSLVRRSNVFDPFSLDLWDPFDSVFRSVVPATSDNDTAAFANAR IDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSS GQFMRRFRLPENAKVDQVKAGLENGVLTVTVPKAEVKKPEVKAIEISG" BASE COUNT 183 a 215 c 246 g 171 t ORIGIN 1 gaccgaggaa cacacaacaa acaagacttg catacgtccc aaactcccaa atcgccctct 61 ttgcaatcgc ttcttccgtt ccatttcagt agcccacaac tcgcatcaga aagcgaaaga 121 tagagcaacc atgtcgctgg tgaggcgcag caacgtgttc gacccattct ccctcgacct 181 ctgggacccc ttcgacagcg tgttccgctc cgtcgtcccg gccacctccg acaacgacac 241 cgccgccttc gccaacgccc gcatcgactg gaaggagacg ccggagtcgc acgtcttcaa 301 ggccgacctc cccggcgtca agaaggagga ggtgaaggtg gaggtggagg aaggcaacgt 361 gctggtgatc agcggccagc gcagcaagga gaaggaggac aagaacgaca agtggcaccg 421 cgtggagcgc agcagcgggc agttcatgcg gcggttcagg ctgccggaga acgccaaggt 481 ggaccaggtg aaggccggac tggagaacgg cgtgctcact gtcaccgtgc ccaaggccga 541 ggtcaagaag cctgaggtga aggccattga gatctccggt taagctcctg aagatgtgat 601 cggtgaggga agaagtcatg tttggtgtca gtaattcagt atttcagtgt gtgtttgttt 661 ggtcgtgcaa gtatggtctg ctgctggtgt gtcgtacccg ttgggagtcc gagtggctga 721 gtcggccggt ttcatgtatt cctttgtgag tacttgtgta atcgccttct tagttcttgc 781 tcgttgagga ataaataaag agcttttcag gttgc //