LOCUS       AK242118                1167 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA, clone: J075146M01, full insert
            sequence.
ACCESSION   AK242118
VERSION     AK242118.1
KEYWORDS    FLI_CDNA; CAP trapper.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 1167)
  AUTHORS   Kikuchi,S., Adachi,J., Aizawa,K., Akimura,T., Arakawa,T.,
            Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A.,
            Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N.,
            Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y.,
            Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y.,
            Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H.,
            Kawagashira,N., Kawai,J., Kawamata,M., Kishikawa-Hirozane,T.,
            Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y.,
            Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T.,
            Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T.,
            Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M.,
            Nagata,T., Nakahama,Y., Nakamura,M., Namiki,T., Narikawa,R.,
            Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M.,
            Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R.,
            Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D.,
            Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K.,
            Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y.,
            Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M.,
            Yasunishi,A., Yazaki,J., Yokomizo,S., Yoshimura,A., Eguchi,K.,
            Kanamori,H., Yamagata,H., Kamiya,K., Kurita,K., Kikuta,A. and
            Bito,T.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-OCT-2006) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Division of Genome
            and Biodiversity Research; 2-1-2 Kannondai, Tsukuba, Ibaraki
            305-8602, Japan
REFERENCE   2
  AUTHORS   Kikuchi,S.
  TITLE     Oryza sativa full length cDNA
  JOURNAL   Published Only in Database(2006)
COMMENT     This clone is one of the 2.6K full-length cDNA clones from
            japonica rice.
            URL:http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.,
            Yamamoto,M. and Nakahama,Y.
            
            NIAS STAFF Institute Sequence group: Eguchi,K., Kanamori,H.,
            Yamagata,H., Kamiya,K., Kurita,K., Kikuta,A. and Bito,T.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..1167
                     /clone="J075146M01"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..1167
                     /db_xref="Osa1:LOC_Os01g70890"
                     /note="(Rice Genome Annotation Project) nuclear
                     transcription factor Y subunit B-5, putative, expressed"
                     /note="mapping to R01-TIGRv4S1-001922R (Chr.1: short
                     arm=41355708, long arm=41356872, direction=reverse) for
                     TIGR Pseudomol ver4"
BASE COUNT          281 a          316 c          308 g          262 t
ORIGIN      
        1 ggcgtgctgc cctctaaatc gtcatatata ctgtagcgct tccactagcc caagaactca
       61 ccaccaccac cactgaagag agagagagag agagagctcg agcttagcca tggccgacca
      121 ccatggcggc caccacgccg acgggcatcg ccggcagcag cagctgcagg gggaggcggc
      181 ggatcaggcg gcggcggaga tcatcaagga gcaggacagg ttgctgccaa tcgcgaacgt
      241 ggggcgaatc atgaagcaga tcctcccccc caacgccaag atctccaagg aggccaagga
      301 gacgatgcag gagtgcgtct cggagttcat cagcttcgtc accggcgagg cctccgacaa
      361 gtgccacaag gagaagcgca agacggtcaa cggcgacgac gtctgctggg ccttcggcgc
      421 cctcggcttc gacggctacg tcgaccccat gcgcaggtac ctcaacaagt accgcgagct
      481 cgagggcgac cgcgccgccg ccgccgccac ctcccgctcc ggcgccggcg ccgccgcggg
      541 ccccgaccac ccttcctcct cctcctccgc cgccgccgcc accgccggtc atttcatgtt
      601 caacgccatg gacaggtcga cggatagctc caggcagttc tagccaccgt tctttgcgtc
      661 gtcttcttct cacccaacac ccaacctttc ctcctaatct tgagaggtca gtaatttaat
      721 taagctaagc tactccatcg tctctagcta ctccatctta ccttactcct ccatatgaac
      781 agctattgca gtggctaagc taattaataa ttagtaagag tagccagtgc ttagctacta
      841 gtagctagct agattagcta attaatctgt gttcatggtg tgatatgatg gtgagaagct
      901 aggtggggat ggatgtgctg agattgattg aaggacatgg aagatgaggt taggatgaag
      961 aagctagcag ctaagatggc ccggcgacat gatggatatg gagtaattaa tcggagtatg
     1021 caaaatgatc gattttatat gaataattct tgtacgtcca atttaatttt tgtagtgatt
     1081 aattattttg atctgcacgt tatgacgatt gacatagttg gagttgggta tttttgaatc
     1141 tgagtaaatt taattctaga tttgatc
//