LOCUS AK241340 1658 bp mRNA linear PLN 04-DEC-2008
DEFINITION Oryza sativa Japonica Group cDNA, clone: J065146O13, full insert
sequence.
ACCESSION AK241340
VERSION AK241340.1
KEYWORDS FLI_CDNA; CAP trapper.
SOURCE Oryza sativa Japonica Group (Japanese rice)
ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE 1 (bases 1 to 1658)
AUTHORS Kikuchi,S., Adachi,J., Aizawa,K., Akimura,T., Arakawa,T.,
Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A.,
Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N.,
Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y.,
Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y.,
Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H.,
Kawagashira,N., Kawai,J., Kawamata,M., Kishikawa-Hirozane,T.,
Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y.,
Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T.,
Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T.,
Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M.,
Nagata,T., Nakahama,Y., Nakamura,M., Namiki,T., Narikawa,R.,
Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M.,
Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R.,
Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D.,
Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T.,
Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K.,
Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y.,
Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M.,
Yasunishi,A., Yazaki,J., Yokomizo,S., Yoshimura,A., Eguchi,K.,
Kanamori,H., Yamagata,H., Kamiya,K., Kurita,K., Kikuta,A. and
Bito,T.
TITLE Direct Submission
JOURNAL Submitted (10-OCT-2006) to the DDBJ/EMBL/GenBank databases.
Contact:Shoshi Kikuchi
National Institute of Agrobiological Sciences, Division of Genome
and Biodiversity Research; 2-1-2 Kannondai, Tsukuba, Ibaraki
305-8602, Japan
REFERENCE 2
AUTHORS Kikuchi,S.
TITLE Oryza sativa full length cDNA
JOURNAL Published Only in Database(2006)
COMMENT This clone is one of the 2.6K full-length cDNA clones from
japonica rice.
URL:http://cdna01.dna.affrc.go.jp/cDNA/
NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.,
Yamamoto,M. and Nakahama,Y.
NIAS STAFF Institute Sequence group: Eguchi,K., Kanamori,H.,
Yamagata,H., Kamiya,K., Kurita,K., Kikuta,A. and Bito,T.
FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
Yoshimura,A., Matsubara,K. and Murakami,K.
Genome Exploration Research Group in Riken Genomic Sciences Center
and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
Yasunishi,A. and Hayashizaki,Y.
FEATURES Location/Qualifiers
source 1..1658
/clone="J065146O13"
/cultivar="Nipponbare"
/db_xref="taxon:39947"
/mol_type="mRNA"
/organism="Oryza sativa Japonica Group"
/tissue_type="germinating seeds"
misc_feature 1..1658
/db_xref="Osa1:LOC_Os01g36550"
/note="(Rice Genome Annotation Project) lysM
domain-containing receptor-like kinase 4, putative,
expressed"
/note="mapping to R01-TIGRv4S1-000843F (Chr.1: short
arm=20611788, long arm=20614512, direction=forward) for
TIGR Pseudomol ver4"
BASE COUNT 485 a 327 c 375 g 471 t
ORIGIN
1 gtttgtctta tgcagttcag gatggagata ccttgggcaa catcgcaagc ttgttcagat
61 cgagttggaa agatatcttg gatttgaacc caagagtcgc aaatcctgat ttcataaagc
121 caggatggat cttgtttatc ccgatgggag ttgctggtcc ttctaacaag aaggttcgtg
181 gcttaccaat cataatagca gcatccatat cagttgccat gttgctccta tgtgtgttaa
241 ccatcatact ttgcctgaaa aggagatcta ctctgcccag tgttgaagca ccagcgcata
301 aaatggagaa aattcccagt aatacaagca ttgctgcact ggagagtcgt ttctatccat
361 ccatgagaat caatgaaatt gatccattcc aaacagagag gcctgtgatt ttcagcttga
421 gagcaattga agatgctaca tctaattttg atgagaagag gaagattggt gagggaggat
481 atggaagtgt ctacctcggt ttcataggaa cacacgaaat agcagtcaag aagatgaaag
541 caagcaaatc aaaggagttc tttgctgagt tgaaagtgct gtgcaaaata catcacataa
601 atgtggttga attgattggt tatgctgctg gggatgatca tctttacctc gtttatgagt
661 atgtccagaa tggatcgctt agtgaacatc tccatgatcc tttgctgaaa ggccaccaac
721 ctctatcatg gactgcaaga acacagatag caatggactc tgcacgtggt attgaataca
781 tccatgatca tacaaagacc tgctatgtgc accgtgacat caaaaccagc aatattctgc
841 tagacaatgg tctacgagct aaagtgagcc catgcaaaac ccatcaattt tcaggtatgt
901 ctgctcagat attccatctg tttgattatc ttttgtttaa caggttgcag atttcggctt
961 ggtcaagctc gttcagcgta gtgatgaaga tgaatgtctg gcaactcgtt tggttggaac
1021 gccaggctac cttccaccag aatcagttct tgagcttcac atgactacca aatccgatgt
1081 gtatgcattc ggagtagttc ttgcagagct tattactggt ctccgtgcac ttgtacggga
1141 caacaaggaa gctaacaaga caaaatctct aatctcaatc atgaggaaag cattcaaacc
1201 agaagatctg gagagttccc tggagacaat tgtagatccc tacctgaagg acaattaccc
1261 catagaagaa gtttgcaagt tggcaaacat ttcgatgtgg tgcctcagtg aggatccact
1321 gcaccgccct gaaatgaggg aggttatgcc gattttggct caaattcata tggcttccat
1381 agagtgggaa gcatcactcg gaggcgatgg tgaagtcttc agtggcgttt ccaatggtag
1441 atgatggagc agcattgctt tggtaattgg tacagagaag aatgcactcc ttgtttttat
1501 taatttggag agctatttgt tgtagtgcat tttgggaatt tatatactgt gttcctcact
1561 aactgttgat gtaatatgtt tatattggac actccctttc caagcagttt cagcagcgac
1621 caaattagtc atcaaattct ttaaaaaaaa aaaaaacc
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