LOCUS AK240654 2735 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA, clone: J023098I11, full insert sequence. ACCESSION AK240654 VERSION AK240654.1 KEYWORDS FLI_CDNA; CAP trapper. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 2735) AUTHORS Kikuchi,S., Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakahama,Y., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S., Yoshimura,A., Eguchi,K., Kanamori,H., Yamagata,H., Kamiya,K., Kurita,K., Kikuta,A. and Bito,T. TITLE Direct Submission JOURNAL Submitted (10-OCT-2006) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Division of Genome and Biodiversity Research; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS Kikuchi,S. TITLE Oryza sativa full length cDNA JOURNAL Published Only in Database(2006) COMMENT This clone is one of the 2.6K full-length cDNA clones from japonica rice. URL:http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Yamamoto,M. and Nakahama,Y. NIAS STAFF Institute Sequence group: Eguchi,K., Kanamori,H., Yamagata,H., Kamiya,K., Kurita,K., Kikuta,A. and Bito,T. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..2735 /clone="J023098I11" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" /tissue_type="flower" CDS 64..2538 /db_xref="Osa1:LOC_Os05g07880" /note="(Rice Genome Annotation Project) phospholipase D alpha 1 precursor, putative, expressed" /note="mapping to R05-TIGRv4S1-000210R (Chr.5: short arm=4233867, long arm=4238304, direction=reverse) for TIGR Pseudomol ver4" /protein_id="BAH00843.1" /translation="MAKILLHGTMHVTIFEAESLSNPSRPSSQAPQFLRKLVEGIEDT VGVGKGTSKVYATIGLDKARVGRTRTLADDTAAPRWYESFHVYCAHLATHVAFTLKAK NPIGASLLGVGYLPVRDVLAGDEVDRWLPLCDDTDARTPIGDGGGKVHVKLQYFDISK DRSWGRGVRSGKYPGVPYTFFSQRQGCKVTLYQDAHVPDGFIPRIPLDGGRSYEPHRC WEDIFDAINGARHFIYITGWSVYTEIALIRDADRPKPGGGVTLGELLKKKAGEGVRVL MLVWDDRTSVGMLKKDGLMATHDEETMNYFQGTEVNCVLCPRNPDDSGSIVQDLQIST MFTHHQKIVVVDHDMPSSRHGGGNGGGRRRVVSFVGGLDLCDGRYDTPFHSLFRTLGT AHHDDFHQPNFATATVAKGGPREPWHDIHCRLEGPVAWDVLYNFEQRWRKQGGKDLLV QLRDLAETVIPPSPAMFPEDAESWNVQLFRSIDGGAAFGFPDTPEDAARAGLVSGKDQ IIDRSIQDAYIAAIRRARSFIYIENQYFLGSSYCWKPNDGVKPEDVGALHLIPKELSM KVVSKIEAGERFTVYVVVPMWPEGIPESGSVQAILDWQRRTMEMMYTDIAHAIQAKGI DADPKDYLTFFCLGNREAKSAGEYEPPEQAEPDTGYFHAQQNRRFMIYVHTKMMIVDD EYIIVGSANINQRSMDGARDSEIAMGAYQPHHLAAAGRPARGQVHGFRMALWYEHLGT VDEAFQRPESLDCVRKVNAMADRCWDLYAGDGPERDLPGHLLTYPVGVAGDGTITQLP GVEFFPDTQARILGAKSDYLPPILTT" BASE COUNT 521 a 907 c 859 g 448 t ORIGIN 1 gctgttcgat caatcggggt gatcatcgag atcgtgttga gggatagata gtttaatcta 61 acaatggcga agatcctgct ccatgggacg atgcacgtca ccatcttcga ggcggaatcg 121 ctctccaacc ctagcaggcc aagctcccaa gcgccccagt tcctccgcaa gctggtggag 181 gggatcgagg acacggtggg cgtgggcaag gggacgagca aggtgtacgc caccatcggc 241 ctcgacaagg cccgcgtcgg ccgcacccgc acgctcgccg acgacaccgc cgcgccgcgc 301 tggtacgagt ccttccacgt ctactgcgcc cacctcgcca cccacgtcgc cttcaccctc 361 aaggccaaga accccatcgg cgcctccctc ctcggcgtcg gctacctccc cgtccgggac 421 gtcctcgccg gcgacgaggt cgaccgctgg ctccccctct gcgacgacac cgacgcgcgc 481 acccccatcg gcgacggcgg cggcaaggtc cacgtcaagc tccagtactt cgacatctcc 541 aaggatcgga gctggggccg cggcgtccgc agcggcaagt accccggcgt gccctacacc 601 ttcttctcgc agcggcaagg atgcaaggtg acgttgtacc aggacgccca tgtccccgac 661 gggttcatcc cccggatccc gctcgacggc ggccggagct acgagccgca ccggtgctgg 721 gaggacatct tcgacgccat caatggcgcg aggcatttta tctatatcac tggttggtcg 781 gtgtacacgg agatcgcgct gatcagggac gccgaccggc cgaagcccgg cggcggcgtg 841 acgctcggcg agctgctgaa gaagaaggcc ggcgagggcg tgagggtgct gatgctggtg 901 tgggacgacc ggacgtcggt ggggatgctc aagaaggacg ggctcatggc gacgcacgac 961 gaggagacga tgaactactt ccagggcacg gaggtgaact gcgtgctgtg cccgcgcaac 1021 ccggacgact ccggcagcat cgtgcaggac ctgcagatct ccaccatgtt cacgcaccac 1081 cagaagatcg tcgtcgtcga ccacgacatg ccgtcgtcgc gccacggcgg cggcaatggc 1141 ggcgggcggc ggagggtggt gagcttcgtc ggcgggctgg acctctgcga cgggaggtac 1201 gacacgccgt tccactcgct gttccggacg ctggggacgg cgcaccacga cgacttccac 1261 cagccgaact tcgcgacggc gacggtggcc aagggcgggc cgcgcgagcc gtggcacgac 1321 atccactgcc gcctcgaggg ccccgtggcg tgggacgtgc tctacaactt cgagcagcgg 1381 tggcgcaagc agggcggcaa ggacctcctc gtccagctcc gggacctcgc cgagacggtc 1441 atcccgccgt cgccggcgat gttcccggag gacgccgagt cgtggaacgt gcagctgttc 1501 cgctccatcg acggcggcgc cgcgttcggc ttcccggaca cccccgagga cgccgcccgc 1561 gccggcctcg tcagcggcaa ggaccagatc atcgaccgga gcatccagga cgcctacatc 1621 gccgccatta ggagggcgcg gagcttcatc tacatcgaga accagtactt cctcgggagc 1681 tcctactgct ggaagcccaa cgacggcgtc aagccggaag atgtcggcgc gctccacctc 1741 atccccaagg agctctccat gaaggtggtg agcaagatcg aggccggcga gcgcttcacc 1801 gtctacgtcg tcgtgccgat gtggccggag ggcatcccgg agagcggctc cgtccaggcc 1861 atccttgact ggcagcgccg cactatggag atgatgtaca ccgacatcgc ccacgccatc 1921 caggccaagg gcatcgacgc cgaccccaag gactacctca ccttcttctg cctcggcaac 1981 cgcgaggcca agtccgccgg cgagtacgag ccaccggagc aggccgagcc cgacaccggc 2041 tacttccacg cgcagcagaa tcgccgcttc atgatctacg tccacaccaa gatgatgatc 2101 gtggacgacg agtacatcat cgtcgggtcg gcgaacatca accagaggtc gatggacggg 2161 gcgagggact cggagatcgc catgggagcg taccagccgc accacctggc ggcggcgggg 2221 cggccggcga gggggcaggt gcacgggttc aggatggcgc tgtggtacga gcacctcggt 2281 accgtcgacg aggcgttcca gcggccggag agcctcgact gcgtgcgcaa ggtgaacgcc 2341 atggcggaca ggtgctggga cctctacgcc ggcgacgggc cggagcgcga cctccccggc 2401 cacctgctca cctaccccgt cggcgtcgcc ggcgacggca ccatcacgca gctccccggc 2461 gtggagttct tcccggacac ccaggcgcgg atccttggcg ccaaatccga ctacctcccg 2521 ccaattttga ccacttaaag aagagctaaa ttaacctctc tgtgcgcttt atcgtcaatg 2581 agaagagatt tattttggtt ttttttactt ttgaataaga acaccacact agtttatggc 2641 ttctgtattt attttggaca ataacaactg cattaatgca gtgaaacatc atgatgagtt 2701 gctatttgtt atgacagatt tgctagtttc acact //