LOCUS       AK121623                1884 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J033045G07, full insert
            sequence.
ACCESSION   AK121623
VERSION     AK121623.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 1884)
  AUTHORS   Kikuchi,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JAN-2003) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakahama,Y., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J.,
            Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K.,
            Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H.,
            Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K.,
            Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T.,
            Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y.,
            Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y.,
            Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M.,
            Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Collection, mapping, and annotation of 28K full-length cDNA clones
            from japonica rice
  JOURNAL   Unpublished (2003)
REFERENCE   3
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 32K full-length cDNA clones from
            japonica rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S.,
            Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N.,
            Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., 
            Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., 
            Li,C., Ohtsuki,K., Shishiki,T., Yamamoto,M. and Nakahama,Y.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., 
            Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., 
            Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., 
            Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., 
            Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., 
            Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences 
            Center and Genome Science Laboratory in Riken: Adachi,J., 
            Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., 
            Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., 
            Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., 
            Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., 
            Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., 
            Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., 
            Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., 
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., 
            Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., 
            Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., 
            Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., 
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., 
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., 
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..1884
                     /clone="J033045G07"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..1884
                     /db_xref="Osa1:LOC_Os05g04340"
                     /db_xref="RAP-DB:Os05g0134000"
                     /note="(RAP Annotation release2) Similar to
                     Shaggy-related protein kinase eta (EC 2.7.1.-) (ASK-eta)
                     (BRASSINOSTEROID-INSENSITIVE 2) (ULTRACURVATA1)"
                     /note="(Rice Genome Annotation Project) glycogen synthase
                     kinase-3 homolog MsK-1, putative, expressed"
                     /note="mapping to R05-TIGRv4S1-000101R (Chr.5: short
                     arm=1952051, long arm=1955855, direction=reverse) for
                     TIGR Pseudomol ver4"
BASE COUNT          505 a          446 c          446 g          487 t
ORIGIN      
        1 gctccgaatc ctcccccgca ttccgcgccg gagctgagga gggacagcga gccagcgagg
       61 gaggtggggc aatccagcga gcgccagatc gtgccgccag ccccgctccg tcctctctcc
      121 ggcgaccctc cgccccgcct gatcccgtgg tggatcaact acaactcatc tttaggaaag
      181 cctcttgaac attagccttg tgtgcctttc aacagtatgg cctcggtagg tgtggtgcgt
      241 tcttccttgg ggtttcagaa cgaaacaagt acaagtggcg atgccgaccg gcttccgaat
      301 gagatgagca atatgagtat aagggatgat aataaggaca ttgacgacat agttgtcaat
      361 ggcaatggga cagaacctgg tcatgttatt gtgacaagca ttgatggaag aaatggacag
      421 gctaaacaga ccattagcta catggccgag cgtgtcgtag gtcatggatc ctttggaact
      481 gttttccagg ccaagtgcct ggaaaccggt gagactgtgg ctataaagaa ggttcttcaa
      541 gacaagagat ataagaaccg tgagctgcaa acaatgcgag ttcttgacca cccaaatgtg
      601 gtgtcactaa agcattgttt tttctcaaag actgagaagg aggagcttta cctcaatttg
      661 gtgcttgagt atgtgccaga gactgctcac cgtgtaatta aacattacaa caagatgaac
      721 caacgcatgc cattgatata tgcaaaacta tacatgtatc agatatgcag agctttggcg
      781 tacattcaca acaccattgg cgtgtgtcac agggatatca agccacaaaa tcttctggtg
      841 aacccacata ctcatcagct gaaattatgt gacttcggca gcgcgaaagt cttggtaaaa
      901 ggagaaccaa atatttctta catctgttca aggtactaca gagctccaga gctcatattt
      961 ggtgctactg aatacacaac agcgattgat gtttggtctg ccggttgtgt gcttgctgaa
     1021 ctcctcctgg ggcagcctct attccctggc gacagtggcg ttgatcagct tgttgaaatc
     1081 atcaaggttc tgggtacccc tacacgagag gagattaagt gcatgaaccc aaattacacc
     1141 gagtttaaat ttccgcaaat caaagctcac ccatggcaca agatcttcca taaaagaatg
     1201 cctgctgaag cagtcgatct cgtctccagg cttttgcagt attcaccata cctccggtcc
     1261 actggcttcg gaagcattga tccatccctt cttcgatgaa ctccgtgatc caaacacccg
     1321 cttaccgaac ggccgtttcc ttcctcctct cttcaacttc aagccccatg aactgaaggg
     1381 tatgccaatg gaattcctgg tgaagcttat ccccgaacat gctcgaaagc aatgcgcgtt
     1441 tgtaggatgg tgatttctga ggtcagcatg aaaactagtt cagaatttct tcaccgtcct
     1501 ccattagaaa gcagagatga accctgtgtg cagccatttg ggaaagctgg tgcatatgga
     1561 agtggaacta catttttttg tccgagattc tgacgccgcg tattcttttc ccccctccca
     1621 ctttgctgct gccggtgtaa ccaaaaaatc atccacggtt ctgtaaagtt gatgaagaag
     1681 agtgtaaaat caggttgaaa actgaattcg atcggtttgt caagattgta gcaacatgca
     1741 aggaaggatg ttgcacactt tgtatggcaa tgttcgttcg gtccaaatat ttggacatgg
     1801 atcgagaggc tattcattta attgtacttg ctgctacatg ttcttacata tcagtaatct
     1861 tctgagaagc tcgtgaaaga aagc
//