LOCUS       AK121426                1419 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J023135L03, full insert
            sequence.
ACCESSION   AK121426
VERSION     AK121426.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 1419)
  AUTHORS   Kikuchi,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JAN-2003) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakahama,Y., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J.,
            Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K.,
            Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H.,
            Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K.,
            Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T.,
            Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y.,
            Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y.,
            Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M.,
            Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Collection, mapping, and annotation of 28K full-length cDNA clones
            from japonica rice
  JOURNAL   Unpublished (2003)
REFERENCE   3
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 32K full-length cDNA clones from
            japonica rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S.,
            Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N.,
            Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., 
            Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., 
            Li,C., Ohtsuki,K., Shishiki,T., Yamamoto,M. and Nakahama,Y.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., 
            Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., 
            Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., 
            Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., 
            Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., 
            Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences 
            Center and Genome Science Laboratory in Riken: Adachi,J., 
            Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., 
            Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., 
            Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., 
            Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., 
            Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., 
            Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., 
            Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., 
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., 
            Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., 
            Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., 
            Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., 
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., 
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., 
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..1419
                     /clone="J023135L03"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     CDS             86..1195
                     /db_xref="Osa1:LOC_Os09g15420"
                     /db_xref="RAP-DB:Os09g0323000"
                     /note="(RAP Annotation release2) Similar to UDP-galactose
                     4-epimerase-like protein"
                     /note="(Rice Genome Annotation Project) UDP-glucose
                     4-epimerase GEPI48, putative, expressed"
                     /note="mapping to R09-TIGRv4S1-000216R (Chr.9: short
                     arm=9436788, long arm=9441552, direction=reverse) for
                     TIGR Pseudomol ver4"
                     /protein_id="BAH00483.1"
                     /translation="MAGGEVVAVAAAAAGTSRTVLVTGGAGYIGSHTVLQLLAAGFRV
                     VVADSLGNSSELAVRRVAALAGDKARNLSLHKVDIRDKGGLEKVFSSTRFDAVVHFAG
                     LKAVGESVQKPLLYYDHNVAGTIILLEVMAAHGCKKLVFSSSAAVYGSPKNSPCTEEF
                     PLTPHNPYGRTKLIAEEICRDIYHSDSEWSIILLRYFNPVGAHPSGYLGEDPCGIPNN
                     LMPFVQQVAVGRRPSLTIFGNDYATKDGTGVRDYIHVVDLAEGHIAALRKLFESSIGC
                     QAYNLGTGKGTSVLEIVNAFEKVSGKKIPLVIGPRRPGDAEILFSSAAKAEREFKWKA
                     KYGIEEMCRDQWNWASKNPFGYASPDSTKQNGHSH"
BASE COUNT          361 a          308 c          394 g          356 t
ORIGIN      
        1 ggaaggtcga agcagatcca ctcgcgcgct cgcgagggtg cgtcgcgagc gggaggtcag
       61 agaaggggga tcggccgatc gatcgatggc ggggggcgag gtggtggcgg tggcggcggc
      121 ggcggcgggg acgagcagga cggtgctggt gacgggaggg gccgggtaca tcgggagcca
      181 caccgtgctg cagctgctcg ccgcggggtt ccgcgtcgtc gtcgccgaca gcctcgggaa
      241 ctcctccgag ctcgccgtcc gccgcgtcgc cgcgctcgcc ggggacaagg cgcggaacct
      301 ctccttacac aaggttgata ttcgtgataa gggtggactg gaaaaggttt tttcttcgac
      361 aagatttgat gctgtcgttc attttgctgg tctgaaagct gtgggtgaaa gtgtgcagaa
      421 gccattgctt tattatgacc ataatgttgc tgggacaata attcttctag aagttatggc
      481 agcccatgga tgtaaaaagt tggtgttttc atcgtcagct gcagtttatg gatcacctaa
      541 aaactcaccc tgcacagaag agtttcctct cactccacac aatccatatg gcagaaccaa
      601 gctcatagca gaggagattt gccgtgatat ataccattca gattctgaat ggagcataat
      661 tttacttagg tacttcaatc ctgttggagc tcatcccagt ggataccttg gtgaagaccc
      721 atgtggaatt cctaacaacc tcatgccctt cgtccagcaa gttgctgtcg ggaggagacc
      781 gtcacttaca atatttggaa atgactatgc aacaaaagat gggacagggg tacgtgatta
      841 tattcatgta gttgatcttg ctgaggggca tattgctgca ctacggaagc tgtttgaaag
      901 ctcaatagga tgtcaagcat acaaccttgg aacaggaaag ggaacatcag tgttggaaat
      961 agttaatgca tttgagaaag tttctggaaa gaaaatacct ttggttattg gtccacgacg
     1021 ccctggtgat gctgagattc tcttttcgtc agctgctaaa gcagagagag aattcaagtg
     1081 gaaggcaaaa tatggcatcg aagaaatgtg cagagaccaa tggaactggg cgagcaagaa
     1141 tcctttcggg tacgcctcgc ccgactccac caagcagaat ggtcattcac actgatcaac
     1201 gccgattggt ctgtgtgaac tcagttgtac atgcaacgta gaactacagg tcgagatcga
     1261 tgtagatcta gtcggtcagt catacagaga aagcttagaa aagatttgtt ctcttctttt
     1321 ggaccagtat tggtataaat ctacccttct gcatatagtt caaaattgtt gtaggaacat
     1381 tgctatagtc agtcagctaa ttcaattctt tttcttgct
//