LOCUS       AK121330                3759 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J023118F05, full insert
            sequence.
ACCESSION   AK121330
VERSION     AK121330.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 3759)
  AUTHORS   Kikuchi,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JAN-2003) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakahama,Y., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J.,
            Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K.,
            Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H.,
            Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K.,
            Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T.,
            Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y.,
            Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y.,
            Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M.,
            Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Collection, mapping, and annotation of 28K full-length cDNA clones
            from japonica rice
  JOURNAL   Unpublished (2003)
REFERENCE   3
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 32K full-length cDNA clones from
            japonica rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S.,
            Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N.,
            Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., 
            Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., 
            Li,C., Ohtsuki,K., Shishiki,T., Yamamoto,M. and Nakahama,Y.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., 
            Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., 
            Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., 
            Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., 
            Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., 
            Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences 
            Center and Genome Science Laboratory in Riken: Adachi,J., 
            Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., 
            Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., 
            Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., 
            Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., 
            Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., 
            Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., 
            Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., 
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., 
            Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., 
            Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., 
            Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., 
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., 
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., 
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..3759
                     /clone="J023118F05"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..3759
                     /db_xref="Osa1:LOC_Os11g37000"
                     /db_xref="RAP-DB:Os11g0578500"
                     /note="(RAP Annotation release2) Heat shock protein DnaJ
                     family protein"
                     /note="(Rice Genome Annotation Project) dnaJ domain
                     containing protein, expressed"
                     /note="mapping to R11-TIGRv4S1-000636F (Chr.11: short
                     arm=21337868, long arm=21342224, direction=forward) for
                     TIGR Pseudomol ver4"
BASE COUNT         1124 a          763 c          832 g         1040 t
ORIGIN      
        1 gggtctccta ctcactcacc tcacctctgc ctctgctctt cctccaagaa cctaaccacg
       61 cccaccgccc accacggtgg ctcgccggcg ccggccgccg cggatcacgt tccagcccca
      121 gctcagctcg gaggtagagc atgttaatgc cattctggaa caagtatatg tgaagggttt
      181 cttggtcaaa tttctggaat actttgatgg aatgcaacag agaggaggcc ttcagggcca
      241 gagaaattgc tgtaaagaag ctggaaaata gagactttgt cggcgcccgc aagatcgcga
      301 ttaaagctca aaggcttttt cctgagcttg agaacatctc ccagctgtta attatctgtg
      361 aagttctttc ttcagctgag gcaaagatct ctggagagtt ggattggtat ggtgttcttc
      421 aggtggataa aatggcagac gaaacagtaa taagaaggca atacaacata ctttcgtatc
      481 ggcttcatcc tgataataat actctgtttg gtgccgaagc cgcattcagg tttgtttcag
      541 aagctcatgc aatattgagt gatcatgtga agaggtctct gtatgacacc aaaagacagt
      601 gtgcttcaag agaagtggcc aaggaggcta cacagccacc aaacaagact gattcaaaca
      661 taagcaatgt ggctggatcc atgacaccat ctgcttctgt gcttgtattc tggacaatat
      721 gtccgcattg tcagaagcga tttctgtact accaacggaa ctttttggcc cgctgcagtg
      781 attgtggtaa gaggttcttc gcaatcaaac tgcatgagca gtctgttccc tcgagaatcc
      841 tatcaactgc tgcaaaaaag tctcagcttt caacgtcaga aatgttatca tttcaacgaa
      901 gtagtgtccc caatcagcat caacaaggta aatgcttggt tacaagaagg cgaggccatt
      961 caattttcag caatgaagca aactaaatct cacatctgcg cttttgacaa tgataagcct
     1021 ggaactttgg taccaaagag ttctgatctt aagtccatct cagttaagaa tttgactaga
     1081 gaaagtgcac ctgcagagga aaatgctgca gaatcatcca gtcttcagat attgggtaag
     1141 agaaagcttt atgttacctc tgacagcagc catggtatga actccaatat taagaggcaa
     1201 aggaagtata cttgtccatc cgattctgat tcgagtaatg agcagatatg taatgatgat
     1261 gttgctgttc ctgataatca atctactgga cagaatgttc ccatcgaagt ggacagtgaa
     1321 gaggaaagaa atgcaagaca tggaagcaac caacaaactt gtaagaaaaa tgttactgat
     1381 actgcttctc agaagtctgt caattcggtg attgcctacc cttatccaga ctttgatttt
     1441 tgcaagtcca gagatgctga agaaactgat gaatccataa aacaatatgg ctgggctggt
     1501 gacatggcag gtaaaggcct ggtgacaaga agtgacagag ttcaattttc agaaattagc
     1561 caagctaaat ctcatgtgcc tcctgctgac aacgatatac ccggaacttt ggtaccaagg
     1621 agtcctgatc caaactccac cgctgtgcag aatttgactg gagaaagtgt atcagcagag
     1681 acaaatgctc caggatcatc cagtcttcag atattgggtc ggagaaagct ctgtgatagc
     1741 tctgacagca accgtgctat gaactctaat attgagagga aaatgaagta taattctcca
     1801 tctgatgctg attggagtac tgagcaaaca tgtaatgatg atgttgctgt tactgagaat
     1861 caatttgcca aacaacatgt ccccaccgaa gtggacagtg aagaggaagg aaatgaaaaa
     1921 catggagaca atcaacaaag tcataggaaa gatgatactg atacttcttc tcagaattct
     1981 gccaatcctg tgattgccta ctcttctaca gacttctttg attttgacaa gtccagagat
     2041 gtgtcccaaa ttgcggttga tcagatctgg gcagtatatt aaggtcatga ttgcatgcct
     2101 agagcttatg cctgaataaa tcatgtcgat ccttccaacc tcaaagtgca gttcacttgg
     2161 ctggtgcaca acacagtaaa tgaacaaaat tccaaatcga ccaatgaaaa actgccattt
     2221 gcttgtggga acttctgctt aggagaaaca gatgtattgc acaatccatc aaggtactta
     2281 tcccacagtg tttcatcgac aggcaaaaat gggaactcct gtgatataaa tcctaacatg
     2341 ggtgaggtgt gggctcttta taaaggatgg agcatgcagt tgagctctca tgcagataga
     2401 tatcaatcat atgggtatga tattgtgcaa gtcctttcta gtggctcaat ggatgatggt
     2461 gtcacggttt caccgctggt caggattgca gggtttgtca gtctatttgc gaaagtgaag
     2521 aacgagtcat gtttttcgat atcatcatgt gaggtacttc atttttctca cagtatcccc
     2581 ttctataaaa cgaacggaaa tgaaagggta ggtgttgcag aagggttcct ggaactagac
     2641 actgcagctc ttccaagtga cttggattcg gcatttactt ccattactct tgaatcctac
     2701 atggctcttg acaacaaaac aaatatcgaa ttaatcagtt atgtatgccc tgattcagaa
     2761 ttctacaact tcgaacaaga ccgctcgcat gataagtttg aagctggcca gatttgggct
     2821 ctttacagtg atactgataa atttcccaac ttctatggtt gggtaagcaa agttgagatg
     2881 gaaccgttca acgtggattt ggcctggctt gaggcttgcc ctcaacgagc gcaggagaag
     2941 ctgtggttgg agcatgatgt acctgtgagc tgtggtacat ttgaaatcca aaacatggaa
     3001 acaaagttta atgaaaattg tgcattctcc catttaatag aaaccaaaca aattggagca
     3061 aagtgcaagg ttcaaattca tccaaagata ggtgaggtct gggccatcta caagaactgg
     3121 tcaaataagt gggttccttc ccgcagcact cgtggtacta agtatgctat tggcaagatc
     3181 gtcgactcca ctgaagcttt cacattattt ggttatctga ctaaagttga tggttacatc
     3241 tctgtgttca agcctgatgt acgaagggga attctgaaga ttcctgtgaa agagaacctg
     3301 aggttttctc atcgaatacc atcgttttgt ctcacaaaag agaaaggtgg aaagctccat
     3361 gactgctatg agctcgaccc agctgctgtt cctgatgttt ttctacacaa gaattgaagg
     3421 aaaagaactc ccacaaaaaa ggactaatct tagaaattaa gagtgaagat atctcatgat
     3481 agagtcatct agcattatga tatgtatctg agtttctgta cagggcgcgc ccaattatgt
     3541 tagaaaagta ttcatgtttc ataatcatga ctaatttctg ttgaatttca cgctttctgg
     3601 tgaaactgat ctacaatgct gatctattgc tttgctgtct gaagaaacta agaagaatat
     3661 gtattcttct caagtttgaa ttatgtattt atgatacata acattaatgt acttatgtgt
     3721 ctgaccatca gtcaatgtac atgttcctat atttcagcc
//