LOCUS       AK121318                3396 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J023113P04, full insert
            sequence.
ACCESSION   AK121318
VERSION     AK121318.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 3396)
  AUTHORS   Kikuchi,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JAN-2003) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakahama,Y., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J.,
            Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K.,
            Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H.,
            Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K.,
            Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T.,
            Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y.,
            Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y.,
            Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M.,
            Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Collection, mapping, and annotation of 28K full-length cDNA clones
            from japonica rice
  JOURNAL   Unpublished (2003)
REFERENCE   3
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 32K full-length cDNA clones from
            japonica rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S.,
            Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N.,
            Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., 
            Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., 
            Li,C., Ohtsuki,K., Shishiki,T., Yamamoto,M. and Nakahama,Y.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., 
            Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., 
            Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., 
            Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., 
            Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., 
            Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences 
            Center and Genome Science Laboratory in Riken: Adachi,J., 
            Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., 
            Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., 
            Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., 
            Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., 
            Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., 
            Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., 
            Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., 
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., 
            Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., 
            Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., 
            Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., 
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., 
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., 
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..3396
                     /clone="J023113P04"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..3396
                     /db_xref="Osa1:LOC_Os12g18729"
                     /db_xref="RAP-DB:Os12g0285100"
                     /note="(RAP Annotation release2) Conserved hypothetical
                     protein"
                     /note="(Rice Genome Annotation Project) expressed protein"
                     /note="mapping to R12-TIGRv4S1-000385F (Chr.12: short
                     arm=10819909, long arm=10830984, direction=forward) for
                     TIGR Pseudomol ver4"
BASE COUNT          864 a          817 c          876 g          839 t
ORIGIN      
        1 gactcctttc cctcctcctc atcctcatct tcatctctag acctcatctt ctccagccac
       61 caccgcctcc cttcccaccg gtggtggcag cgggaagaca gcggctcggt tgagcccggc
      121 ggggagggca cgatttggta tgggaggagc agcggcgact ccatccggcg gtggatccgc
      181 cgcctcctag tcccagctct ctctcccccg atcctcctcc tccccttcct ccaccgccac
      241 cacccacccc tctccctctc tcagatctgg tgcgcgggga gcggtggagg ctacggcggc
      301 ggcggcggcg agatcggtag cagtgatggt ggagaggacg gatccgatgg cggtggttct
      361 cgtcaaccag ttcaaggacg acgacagcag cggctgctgc aacgatggat aggctctggg
      421 cggctcctcc actctcctcc cctctctcat atccagtggc tcggggtggt ggggcgtggc
      481 cgacgcatcc ggcggcggag ctcggacgag ctgccaacta gtagcactcc agcaagcagc
      541 gggtcagcgg agtccggagg gcgcacgtgc gccgcagcga ggtatcagca tggccaggcg
      601 gcggctggct ggccggccgg gttcggcaag cggctaagca ggtgtttagc ggaggaagga
      661 tcgatgtccg gcgccggaca gagccgtggt catcgccttg gattacacat tgattcggat
      721 tggccagagg tcttgttgat caatgactat gcggtgttca tggggtacct gtcgatggtt
      781 gtcaccggga cggggttcct ggtgctcacg tggtccaccg tcatcctcct cggtggattc
      841 gtctccatgc tatccaacaa ggacttctgg agtctcacgg tgatcacgct cgttcaaaca
      901 aggatattcg atgtttttct gaatggaaaa gtaagccaca ttgggtactc attgaagcgc
      961 ttgtgcaagg ccgcacgctt catcgcgttg ccccataacc ataagaaggt tgggttcagg
     1021 ggtgctgttc gagtgcttgt cttcaccatc gtcttgtgtc cgctgttcct gctctacatg
     1081 tttgggctct tcgtttcccc ctggatttcg ctgtggcgtc taatccagca ggattacggc
     1141 gtgacggccg gagacagcag cagcaaggca cacctgcagc ctgcgctggt ggttctctac
     1201 tccctggccc tgttccaggg cgtcctcttc tactacaggg ccatctctgc ttgggaagaa
     1261 cagaagctag tgaaagatgt ggccgacaaa tacatgtttg atacagtgtc gcgcagttca
     1321 gtttcggact atttacatga gatcaaggtc ggatgtgaga atgacccgtc ctttgccaga
     1381 gggaggaacc tgatcacata cgctgtcaag cttatggaat ccacatcacc ggatgggtac
     1441 ctttcaggtg cacggattct tgatacactc atcaagttta atagagatga tgcatcgggg
     1501 agcgaattac cggggcagag tatgcagata tacaatatga ttggatctgc atcctccagt
     1561 cccatactcc acaacttagt tcagatgctg gatttcaaaa gtgcatatga tggagagatc
     1621 aggttgcgag ccgcaaggat tgttgagcac tttgctggtg aggtccgttt agacaaaatc
     1681 ctgcagggga ttcgatgtgt atcttccttg cttgaactcg agcagaaagg atttcagaat
     1741 gaccaccata gttctttcca agaagacgac ggcgaccaac tttcttttga agaagaggat
     1801 gatcaccaga tttctgtcaa agaaaaggat tattacccca aagattataa acagatgcaa
     1861 cttacaggca tgcagatcct tttaaagctc tcctacgaca agaacaactt gttcctcatg
     1921 agcaacacag atgatccggc cttgatcaac aagattgtgg cacttataac gtccaaggga
     1981 tcacttcaca aaaaacaaca taacgaatgg tcctgtatgg cagagctcgg ggtgaagata
     2041 ctaagccgat ttatgcgatt tatgtatggc cctacaaaat caaacaatat tctgtggcat
     2101 gaaatatcaa caagcagcaa agcaatcggc accttggaga gtattcttga gtgtgaccaa
     2161 tgtgactctg tgctgaagaa acacgccata aggattctca aaaggatatt catggataca
     2221 tcttcggcta tgggtgaagg agacagagaa aggttcattg gctccttgat ggacatgtct
     2281 cttcacaaca gtaatggtga ctttcaaaat ctggcaggtg tagatctggc gctcaagaaa
     2341 caagggttaa gcattctcaa agaaatatac ttgaatccat cttcgattat gggcgaagga
     2401 gacagagaaa ggttcatcgg ctccctgatg gacatgtttc ttgacaacag taagggcgac
     2461 tttggaaatc tgccaggtga agatctggac ctcaagaaac aagagttaag tattctcaaa
     2521 gaaatatgca tggatccatc ttcgtttatg ggcgaaggtg acagagaaaa attcatcggc
     2581 accctgatgg acatgtttct tcacaacagc aagggcgact tgtttgaaaa actagcaggt
     2641 gatgatctgg tgcagatatg tagaagaagt ggaagcagtg ccacgatcat attgaggaaa
     2701 tatggtcatg atattgttga ttgtattgct gatactcgtt caagcgtata tagcagcatg
     2761 cacagaaaaa ttgcagcaaa gatcctcaat catctgtgta gtccctactc cactgacgag
     2821 gaacatcttc agaatctgaa ggaggccatc attgatttga tacccaaggt gctaagagaa
     2881 gcacttggtt gggggttgac aggagaagag atactgcgag tggcagtttc aggccttgaa
     2941 ggtacccaag atgatgactg gaaattgcag gaagcattgg cgtccctctg tgcaaccgtg
     3001 tttaacagaa ttgtcagcaa ggatgcagat ttgactgctc ggttcaacaa catcgccgct
     3061 ggtatctgcg accagacaac gaagcctcgc atgaccttcg cagacctcat caatgaagct
     3121 gtaaaagttc atcgcatcga atttaaaaaa ccagaaaaac caaaaccagc tgccaggccg
     3181 gaactgtacg agtttgtgac tgcgaaatac accccgcccc actttatgtt tttgggcgag
     3241 gaagatccca acgcgtgttg tatctcttga taacacccta atttgtactt tctccgtttc
     3301 acaatgtaag tcattctatt atttcctata tttatatgga tattaatgaa tctatatata
     3361 tatatatata tatatttgtc tagatttatt aacatc
//