LOCUS AK121088 1978 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J023065G12, full insert sequence. ACCESSION AK121088 VERSION AK121088.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 1978) AUTHORS Kikuchi,S. TITLE Direct Submission JOURNAL Submitted (31-JAN-2003) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakahama,Y., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Collection, mapping, and annotation of 28K full-length cDNA clones from japonica rice JOURNAL Unpublished (2003) REFERENCE 3 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 32K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Yamamoto,M. and Nakahama,Y. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..1978 /clone="J023065G12" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" CDS 224..1717 /db_xref="Osa1:LOC_Os08g36320" /note="(Rice Genome Annotation Project) glutamate decarboxylase, putative, expressed" /note="mapping to R08-TIGRv4S1-000672R (Chr.8: short arm=22745890, long arm=22749888, direction=reverse) for TIGR Pseudomol ver4" /protein_id="BAH00310.1" /translation="MVLSHASSGRDDAVRCTFATRYACETLPRFRMPEQSIPREAAYQ IINDELMLDGNPRLNLASFVTTWMEPECDKLIMDSVNKNYVDMDEYPVTTELQNRCVN MIAHLFNAPIKEDETAIGVGTVGSSEAIMLAGLAFKRKWQNKRKEQGKPCDKPNIVTG ANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLTGEF EDVKLLNNLLTEKNKETGWDVPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGH KYGLVYPGVGWVIWRSKEDLPEELIFHINYLGTDQPTFTLNFSKGSSQIIAQYYQLIR LGFEGYKNIMQNCMENTAILREGIEATGRFEILSKEAGVPLVAFSLKDSGRYTVFDIS EHLRRFGWIVPAYTMPANAEHVAVLRVVIREDFSRSLAERLVSDIVKILHELDAHSAQ VLKISSAIAKQQSGDDGVVTKKSVLETEREIFAYWRDQVKKKQTGIC" BASE COUNT 480 a 481 c 565 g 452 t ORIGIN 1 ggcggttagt acttagcacc accaccacca cgtcgtttca tctcagcaga catcagttgt 61 tgtcacttct aatcttccgc tattagtagt acggttgcca cactgctagc caatccactt 121 cgattggttc caccgcgcct accgagtttc ccttgctagg cagtagagag agtctgtgat 181 cgagagagaa gaggatcgag cagctagcaa gccggcgggc gccatggtgc tctcgcacgc 241 gagctccggc cgggacgacg ccgtgcgctg caccttcgcg acgcgctacg cctgcgagac 301 gctgccgcgg ttcaggatgc cggagcagtc gatcccgagg gaggcggcgt accagatcat 361 caacgacgag ctgatgctgg acgggaaccc gcggctgaac ctggcgtcct tcgtcaccac 421 gtggatggag cccgagtgcg acaagctcat catggactcc gttaacaaga actacgtcga 481 catggacgag taccctgtca ccacggagct ccagaaccgt tgtgtgaata tgatagctca 541 cctgttcaat gcaccaatca aggaggatga aacagctatt ggagttggga cggtgggatc 601 ctcagaagca attatgcttg caggactggc attcaagagg aagtggcaaa acaaacggaa 661 ggaacagggg aagccatgtg acaaacccaa cattgttact ggtgctaatg ttcaggtttg 721 ctgggagaaa tttgccagat attttgaagt agaactgaag gaggttaagc tcagtgaagg 781 atactatgtc atggatcctg taaaggctgt tgaaatggtg gatgagaaca ctatatgcgt 841 tgcggccatc ttgggctcta ctctcactgg agagtttgag gatgttaagt tattgaataa 901 tctcctaaca gaaaagaata aggaaactgg gtgggatgtg ccaattcatg ttgatgcagc 961 aagtggagga tttatagcac cttttctata ccctgagctt gaatgggact tcaggctacc 1021 actggtgaag agcatcaatg tcagtgggca caagtatggc cttgtgtatc caggtgttgg 1081 ttgggtcatt tggcgaagca aagaggattt gcctgaagaa ctcattttcc atataaacta 1141 tctggggaca gaccagccga cgttcactct gaacttctcc aaaggttcca gccagataat 1201 cgcacagtac tatcaactaa tacgcctggg attcgaggga tacaagaaca tcatgcagaa 1261 ttgcatggag aacacagcaa tactaaggga aggcatagag gcgactggtc gattcgaaat 1321 cctctccaag gaggccggtg tgcccttggt ggcgttctcg ctcaaggaca gcggcaggta 1381 caccgtgttc gacatctccg agcacctgag gaggttcggc tggatcgtgc cggcgtacac 1441 catgccggcc aacgccgagc acgtcgccgt cctccgcgtc gtcatcaggg aggacttcag 1501 ccggagcctc gccgagcggc tcgtctcgga catcgtcaag atcctgcacg agctggacgc 1561 ccattcggcc caggtgctga agatctccag cgccatcgcg aagcagcaat cgggcgacga 1621 tggcgtggtc accaagaaga gcgtcctgga gaccgagagg gagatcttcg cgtactggag 1681 ggaccaggtg aagaagaagc agaccggaat ctgctagtgt ggctctgtga gaaatgcttg 1741 aataacgtgg catgctcgat ttgtgcatgg gatggccgga tcggatggga ctgactggcg 1801 gtgtacggac atggctgccc ttgttcttat gttgaactgt tgatgtagaa aaatgtgtgg 1861 cctttgtatg gttgtaagcc atctacgtac catggacttc agctatttgg tggtttgttt 1921 tcaacttttc catgtacacc tggggcttgc caatctcctt cctcctcttt ttaatccc //