LOCUS       AK121088                1978 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J023065G12, full insert
            sequence.
ACCESSION   AK121088
VERSION     AK121088.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 1978)
  AUTHORS   Kikuchi,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JAN-2003) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakahama,Y., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J.,
            Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K.,
            Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H.,
            Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K.,
            Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T.,
            Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y.,
            Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y.,
            Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M.,
            Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Collection, mapping, and annotation of 28K full-length cDNA clones
            from japonica rice
  JOURNAL   Unpublished (2003)
REFERENCE   3
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 32K full-length cDNA clones from
            japonica rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S.,
            Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N.,
            Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., 
            Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., 
            Li,C., Ohtsuki,K., Shishiki,T., Yamamoto,M. and Nakahama,Y.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., 
            Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., 
            Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., 
            Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., 
            Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., 
            Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences 
            Center and Genome Science Laboratory in Riken: Adachi,J., 
            Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., 
            Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., 
            Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., 
            Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., 
            Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., 
            Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., 
            Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., 
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., 
            Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., 
            Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., 
            Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., 
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., 
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., 
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..1978
                     /clone="J023065G12"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     CDS             224..1717
                     /db_xref="Osa1:LOC_Os08g36320"
                     /note="(Rice Genome Annotation Project) glutamate
                     decarboxylase, putative, expressed"
                     /note="mapping to R08-TIGRv4S1-000672R (Chr.8: short
                     arm=22745890, long arm=22749888, direction=reverse) for
                     TIGR Pseudomol ver4"
                     /protein_id="BAH00310.1"
                     /translation="MVLSHASSGRDDAVRCTFATRYACETLPRFRMPEQSIPREAAYQ
                     IINDELMLDGNPRLNLASFVTTWMEPECDKLIMDSVNKNYVDMDEYPVTTELQNRCVN
                     MIAHLFNAPIKEDETAIGVGTVGSSEAIMLAGLAFKRKWQNKRKEQGKPCDKPNIVTG
                     ANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLTGEF
                     EDVKLLNNLLTEKNKETGWDVPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGH
                     KYGLVYPGVGWVIWRSKEDLPEELIFHINYLGTDQPTFTLNFSKGSSQIIAQYYQLIR
                     LGFEGYKNIMQNCMENTAILREGIEATGRFEILSKEAGVPLVAFSLKDSGRYTVFDIS
                     EHLRRFGWIVPAYTMPANAEHVAVLRVVIREDFSRSLAERLVSDIVKILHELDAHSAQ
                     VLKISSAIAKQQSGDDGVVTKKSVLETEREIFAYWRDQVKKKQTGIC"
BASE COUNT          480 a          481 c          565 g          452 t
ORIGIN      
        1 ggcggttagt acttagcacc accaccacca cgtcgtttca tctcagcaga catcagttgt
       61 tgtcacttct aatcttccgc tattagtagt acggttgcca cactgctagc caatccactt
      121 cgattggttc caccgcgcct accgagtttc ccttgctagg cagtagagag agtctgtgat
      181 cgagagagaa gaggatcgag cagctagcaa gccggcgggc gccatggtgc tctcgcacgc
      241 gagctccggc cgggacgacg ccgtgcgctg caccttcgcg acgcgctacg cctgcgagac
      301 gctgccgcgg ttcaggatgc cggagcagtc gatcccgagg gaggcggcgt accagatcat
      361 caacgacgag ctgatgctgg acgggaaccc gcggctgaac ctggcgtcct tcgtcaccac
      421 gtggatggag cccgagtgcg acaagctcat catggactcc gttaacaaga actacgtcga
      481 catggacgag taccctgtca ccacggagct ccagaaccgt tgtgtgaata tgatagctca
      541 cctgttcaat gcaccaatca aggaggatga aacagctatt ggagttggga cggtgggatc
      601 ctcagaagca attatgcttg caggactggc attcaagagg aagtggcaaa acaaacggaa
      661 ggaacagggg aagccatgtg acaaacccaa cattgttact ggtgctaatg ttcaggtttg
      721 ctgggagaaa tttgccagat attttgaagt agaactgaag gaggttaagc tcagtgaagg
      781 atactatgtc atggatcctg taaaggctgt tgaaatggtg gatgagaaca ctatatgcgt
      841 tgcggccatc ttgggctcta ctctcactgg agagtttgag gatgttaagt tattgaataa
      901 tctcctaaca gaaaagaata aggaaactgg gtgggatgtg ccaattcatg ttgatgcagc
      961 aagtggagga tttatagcac cttttctata ccctgagctt gaatgggact tcaggctacc
     1021 actggtgaag agcatcaatg tcagtgggca caagtatggc cttgtgtatc caggtgttgg
     1081 ttgggtcatt tggcgaagca aagaggattt gcctgaagaa ctcattttcc atataaacta
     1141 tctggggaca gaccagccga cgttcactct gaacttctcc aaaggttcca gccagataat
     1201 cgcacagtac tatcaactaa tacgcctggg attcgaggga tacaagaaca tcatgcagaa
     1261 ttgcatggag aacacagcaa tactaaggga aggcatagag gcgactggtc gattcgaaat
     1321 cctctccaag gaggccggtg tgcccttggt ggcgttctcg ctcaaggaca gcggcaggta
     1381 caccgtgttc gacatctccg agcacctgag gaggttcggc tggatcgtgc cggcgtacac
     1441 catgccggcc aacgccgagc acgtcgccgt cctccgcgtc gtcatcaggg aggacttcag
     1501 ccggagcctc gccgagcggc tcgtctcgga catcgtcaag atcctgcacg agctggacgc
     1561 ccattcggcc caggtgctga agatctccag cgccatcgcg aagcagcaat cgggcgacga
     1621 tggcgtggtc accaagaaga gcgtcctgga gaccgagagg gagatcttcg cgtactggag
     1681 ggaccaggtg aagaagaagc agaccggaat ctgctagtgt ggctctgtga gaaatgcttg
     1741 aataacgtgg catgctcgat ttgtgcatgg gatggccgga tcggatggga ctgactggcg
     1801 gtgtacggac atggctgccc ttgttcttat gttgaactgt tgatgtagaa aaatgtgtgg
     1861 cctttgtatg gttgtaagcc atctacgtac catggacttc agctatttgg tggtttgttt
     1921 tcaacttttc catgtacacc tggggcttgc caatctcctt cctcctcttt ttaatccc
//