LOCUS       AK120967                5900 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J023040G12, full insert
            sequence.
ACCESSION   AK120967
VERSION     AK120967.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 5900)
  AUTHORS   Kikuchi,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JAN-2003) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakahama,Y., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J.,
            Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K.,
            Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H.,
            Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K.,
            Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T.,
            Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y.,
            Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y.,
            Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M.,
            Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Collection, mapping, and annotation of 28K full-length cDNA clones
            from japonica rice
  JOURNAL   Unpublished (2003)
REFERENCE   3
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 32K full-length cDNA clones from
            japonica rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S.,
            Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N.,
            Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., 
            Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., 
            Li,C., Ohtsuki,K., Shishiki,T., Yamamoto,M. and Nakahama,Y.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., 
            Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., 
            Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., 
            Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., 
            Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., 
            Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences 
            Center and Genome Science Laboratory in Riken: Adachi,J., 
            Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., 
            Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., 
            Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., 
            Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., 
            Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., 
            Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., 
            Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., 
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., 
            Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., 
            Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., 
            Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., 
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., 
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., 
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..5900
                     /clone="J023040G12"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..5900
                     /db_xref="Osa1:LOC_Os05g06670"
                     /note="(Rice Genome Annotation Project) gibberellin
                     2-oxidase, putative, expressed"
                     /note="mapping to R05-TIGRv4S1-000188F (Chr.5: short
                     arm=3437594, long arm=3444008, direction=forward) for
                     TIGR Pseudomol ver4"
BASE COUNT         1731 a         1201 c         1221 g         1747 t
ORIGIN      
        1 gttttcgcag ccaactccaa catcctgagc tccaatctcc cactccattc cggccgcgca
       61 ttctcccgct ctcgatcgat cgatcgatca tggtggtgcc ttccgcgacg acgccagcga
      121 ggcaggagac ggtggtggcg gcggcgccgc cagctgcggc ggcgtccggt gtcgtcggcg
      181 gcggcggcgg cgtgacgata gcgacggtgg acatgtcggc ggagcgcggc gcggtggcga
      241 ggcaggtggc gacggcgtgc gcggcgcacg ggttcttccg gtgcgtcggg cacggcgtgc
      301 cggcggcggc gcccgtcgcg gcgaggctgg acgccgcgac ggcggcgttc ttcgcgatgg
      361 cgccggcgga gaagcagcgc gccgggccgg cgagcccgct cgggtacggc tgccggagca
      421 tcgggttcaa cggcgacgtc ggcgagctgg agtacctgct cctccacgtc aaccccgccg
      481 ccgtcgcgca ccgggccagg accatcgacg ccatggaccc ctctcgcttc aggtacgtac
      541 aataccacca ctcactctta gcctagctta atcgattagt tttttactcc ctccatttct
      601 ccgtttcccc gtttcatgtt ataagatgtt atgggttttt gaatatatag attcacgttt
      661 cacgctataa aatgttctgg gttttgaata aattcatgca tgatctattg atgaactttt
      721 aagagtccaa aacattttgt aacatggaac ggatggagtg gcgtattgtg ttgcgcctac
      781 gtgtcaaagt atgcatgctt acatggcaca cgtatttaaa acattgttat gcatgtatat
      841 aactaatgtt ctctatggtt taattttttc ttaatgctac ccatgcatat tctataataa
      901 ataaagtgtg ccggactccg gtcacagaag aatatatttg ttttaatgta tcagtttaac
      961 ttcgacgata attattattg ttcgaagtac aaattttcgg catatttaat agtgtggcct
     1021 tgttctatca aaacataatt tttcgtaaga gattatatac ttgtataact tatttttgga
     1081 ttgtagggat cctttcccta tggttttact tcaaaagatg acttacattt ggattggtga
     1141 taaagaatat acaactaagt agacaaagtt atatctagtt cattttgaaa agttcaaggc
     1201 tcttttttca acgggaaagg agtatcctat ataagatata ttatacagtt aactctgtgc
     1261 cttttaaaag ctctgttgac agtaaaatct catgtagctg gttcatccaa aaaaaaaatt
     1321 ctcatgtagc tgggcataca cgagcttttt tttttttaag aacttacata cacgagctta
     1381 attacttctc tcgatccttt tgcggatgcg cttggttgct cgtaataaat tttgtcacaa
     1441 atctttgata accccaccat ttcccaaatt taagcataca tggtggtaga actatattca
     1501 ctaagtttta cagtgtcgtt gttacaacaa taaactaata ttgcaaatat tgcaatagtt
     1561 acaatataat taatttcttc tatgtattat gtactgaaac gcatatcaat cacatgcatg
     1621 gcactgcata tatggtctta aactatatat gaggcaacgt gaataatata tattattaat
     1681 taagtattac ccgtatacac acacatacac atataattaa agattgtcat ttttattatt
     1741 tttgctagac ccctcgtccc tgtgcatcac taaagtattt ttattgaact agctgacctc
     1801 tacaggggtt taaagcttga ttacttaatt aaactgttaa tgaaagacga ctatatatga
     1861 tccaataata tgttaattaa gacggtgcat gggtgtccgg tgtccctgca gtgtgagatg
     1921 aacatgcaaa aaaaattaaa tatatatcat gctgtgttcc ttaactaacc ggccacatct
     1981 acatattcat gtcataatcc tgcatctgtc tcactgctga tgtgatgccg tccaagcagt
     2041 agtagtgtgg gttggtagca gtaaaagggt tttgtcagct tggttaggtt ttcctatcta
     2101 caatatatct atctatcttt ttcatgtgtt gtcaaaatac agtgagatat gcttacatat
     2161 ttctgcatct gagtactgct caggggtgat gcaacgaagc atcaggtaca tatctatata
     2221 tttagagggc tcagggctcc atcgtttagc cttcagttta caggcataag aaaaaataaa
     2281 ttttatagtt aatttttagg ttttttttat cgtaatttat tttttcagta tttactaaga
     2341 acatgtgtat aaaagtttta tctatatatt attttttaat cactaatata ctgtttcgct
     2401 tataactata tagtagtata aggtatagac ttgcatgatg tctatctaca tgcatgcatg
     2461 ggatgcatat gtaggatagg cttggcttga gagatgtcta gctagctatg ggtttttcat
     2521 cagctacagg gcaattaatt tatagatatg cataatatat tgtgttcaga agtcaaaaga
     2581 aggccaagtt ggaatcatgc atacctgcac tgcactcatg ccagttgcaa gcttgcaatt
     2641 gcaactgggc ttgcttcttt tcttttcagc tggtttggct tgcatatttt ccatgttatg
     2701 atcttctgat gtagcctttt gactatatat caaggatgga ctaaatgtta gtttacacaa
     2761 taaggaaaag gatggaaatg ttacactcat gtcatcatat actataactt aaggtaaatt
     2821 aagatcaatt tacattaatt ttattaagaa aaagttgact caagaaagct gcagtttatg
     2881 ttataatttt aacttattat gttagcatat ggggttttca tttttaattc ttcatagtac
     2941 tacttcagta catatccata tgtatactgt cattttcaga cacaggtccc atcaattaaa
     3001 tcacggaaat gcatgagtac atagttttca aaacaataat tatcacaata atggcataat
     3061 tgatgctatg atggacaggc caatgataag ttagttccaa caatttaaga tcatacatag
     3121 ctagtttcta aagcaaaaga aaagcatgca actgatggga cataacaaac ttgatagctc
     3181 cacaaaatgg gcataagaaa ttttctgatg aaagttaggt atcattgtct aaccaaatag
     3241 acattggaaa aggatcaagc ataccaattg atattttcat ttttgctcta aaaaatgact
     3301 acataagtgg ttttgaaagc gaaagcgaat attgccattg gagaaaatgt ctaccaacta
     3361 agacaataat atatcagatt ttccttaact atctttgtgt atgctgaatg agagctcaca
     3421 tactaggaga gattactcac cactcactga ctgtactcag aaccaggtag tggcctaatc
     3481 agagtttgct gagagaaaat atgatgaaat ggacaagaaa accctcactt aggtagttag
     3541 aagactcctc tcagggtccc tctccaacaa actgtatata tttgtgtatc aaccaatctg
     3601 acatatatgc agtggtttcc aattaatggc aatatccaac caccaactga tgcagcaaca
     3661 gagtgagtac ttgaagcatc cttatctacc agaaagctct gcaagcttaa ttagcaaagt
     3721 acagcaggtt ttcatgtaga aaatgatgtg tttagttggg atatacatga tatatacttt
     3781 ttgaaactcc tcttagttct ctatcaccat acatacatca gccattaata tataatatcc
     3841 atactagtac aagaatatta atcttaatgc cttaatcaac tcaaaagcct aagcttaatt
     3901 atcacaagca catcattttg gaaacatatt gatagcaaca tgccagtgaa gtagtgaaca
     3961 caaagaatgg gataataatg atcaagaatg catcaggtta agaacagaat ggctaggaaa
     4021 tcttcacagt aaccattttg ctatatgaaa agtgcaagac aagaaggaag aacaacctct
     4081 ttttgtcaaa tgcaacagac aggggcccac atggaagtac acacatgtct gatgagaata
     4141 aaatgatcca ggcccctaaa gagcatatct atgctatcca tataaagcca aacaaaagaa
     4201 aggaggcaca catgcaagga gtcctcttta tggtaagata aaatgaaatg tcccagaggt
     4261 tgtgtagtgg caggggcagt gatacttgtg atccacgcac tgatgggtct ttccatggag
     4321 cagtggaaaa aagtatggcc aatcctgtca acaacacatt tttgcccatt ggaaaatttg
     4381 tcacccctcg gctgcatgat gtactgctga ttctgtggcc tatccatgca tcacaagatt
     4441 cacaagaaac gaatatatca cgtcttgtag atggtggtgc acaagcacag aggcatacac
     4501 atatacccat cagtgtatca tcttttctaa ctcatcaggc aggcatgccg agggagggtg
     4561 ggtgcagctt ttgatttgct gcagccatca atcagtcaaa gaccttgctc ctctttctcc
     4621 agcttctttt tacttgtcat ggcacatcca acctgattct gtgataacag cattcttttg
     4681 ataaaatcaa tttcaagttg attgtgctca cttgctgata tcctccctca ctctgttgca
     4741 gtgctattgt gaatgagtac attgaagcca tgaagaagct cgcatgtgag atcctggacc
     4801 tgttaggaga ggggctaggt ctcaaggacc ccagatactt cagcaagctt accacaaacg
     4861 ctgacagtga ctgcctcctg aggatcaacc actaccctcc atcatgcaac attcacaaac
     4921 ttgaccatga tgaccaatgc aatatcaaga gccttgttag caccaaggct agcaatggtg
     4981 ggaatctgat ggcaggtggg cgcattgggt tcggcgagca ctctgacccg cagatcctta
     5041 gcttgctccg agcaaacgat gtggaagggc tacaggtgtt tgtgccggac cacgagggca
     5101 aggagatgtg ggttcaggtg ccatcggacc catcggccat tttcgtcaat gttggtgatg
     5161 tcctccaggc tctgacaaat gggaggctga taagtatccg gcacagggta attgcaaccg
     5221 cctgcaggcc aaggctgtcc acaatatact tcgcatcacc acccctgcat gcacgaatct
     5281 cggcactccc agagacaatc acagccagca gcccacgccg ataccgatca ttcacctggg
     5341 ctgagtacaa gacgacaatg tactcactcc gcctgagcca cagccgccta gaactcttca
     5401 aaattgacga tgatgacagc gacaatgcca gtgagggaaa agcataggaa ttgctggtta
     5461 aattgcagac gatgcctatg gaccagtggg gattaggaag ctgaaactgt ccccaaaatt
     5521 ttggctctct ggcagtctgg ctactatcgt cagatatctc actattatga tggtgtagtg
     5581 cctaagttga cgggtgtgta atatcgttag cagtctacag aagctatggt tgtacggaag
     5641 taatgtactg tcgccttttc agctaactat ccatgttctc tcttatatgt aatgagttag
     5701 ttgacggatg tgtaatattg ctagcattgt atataagcta tggttgtatg gaagtatgta
     5761 atatagcctt ttcagctaac tatccgtgtt ccctttgtcc ctctaaagca caaaagtaag
     5821 acctaactac agagcacaat agatagtttt tgagaactat gatctattaa gaaatcttaa
     5881 gagaaatcag aatacttttg
//