LOCUS       AK120608                1663 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J013151F13, full insert
            sequence.
ACCESSION   AK120608
VERSION     AK120608.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 1663)
  AUTHORS   Kikuchi,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JAN-2003) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakahama,Y., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J.,
            Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K.,
            Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H.,
            Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K.,
            Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T.,
            Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y.,
            Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y.,
            Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M.,
            Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Collection, mapping, and annotation of 28K full-length cDNA clones
            from japonica rice
  JOURNAL   Unpublished (2003)
REFERENCE   3
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 32K full-length cDNA clones from
            japonica rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S.,
            Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N.,
            Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., 
            Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., 
            Li,C., Ohtsuki,K., Shishiki,T., Yamamoto,M. and Nakahama,Y.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., 
            Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., 
            Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., 
            Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., 
            Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., 
            Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences 
            Center and Genome Science Laboratory in Riken: Adachi,J., 
            Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., 
            Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., 
            Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., 
            Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., 
            Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., 
            Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., 
            Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., 
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., 
            Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., 
            Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., 
            Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., 
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., 
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., 
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..1663
                     /clone="J013151F13"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..1663
                     /db_xref="Osa1:LOC_Os07g07270"
                     /db_xref="RAP-DB:Os07g0167200"
                     /note="(RAP Annotation release2) Similar to Zinc finger
                     POZ domain protein (Fragment)"
                     /note="(Rice Genome Annotation Project) speckle-type POZ
                     protein, putative, expressed"
                     /note="mapping to R07-TIGRv4S1-000148R (Chr.7: short
                     arm=3609151, long arm=3612703, direction=reverse) for
                     TIGR Pseudomol ver4"
BASE COUNT          382 a          438 c          430 g          413 t
ORIGIN      
        1 gacccgaagc atcgaacccg aaacgctcac cccaaaattc cccattcccc aagccctaac
       61 cctagctttg atccgaccac cgcttcccct cccctcccat ggacgacgac gccggcgacg
      121 cctcgccgcc gccggccgcc gcgggggttg gcgccaccgc cgcccagtcg cgggacatgg
      181 cggcgtcgcc gaccagctcc cgctccgtga cggagacggt gaacggctcc caccgcttcg
      241 tgatccaggg ctactcgctc gccaagggga tgggcgtcgg gaagcacatc gccagcgaga
      301 ccttctccgt cggcggctac cagtgggcgg tctacttcta ccccgacggg aagaaccccg
      361 aggacaactc cgcctacgtc tccgtcttca tcgccctcgc ctccgagggc accgacgtcc
      421 gcgccctctt cgagctcacg ctgctcgacc agagcggcaa gggcaagcac aaggtccact
      481 cccacttcga ccgctccatc gagtccggcc catacaccct caagtaccgc ggctccatgt
      541 ggggttacaa aaggttcttt cggcgaaccg ctcttgagac gtcggacttt ttgaaagatg
      601 attgcttgaa gataaattgc actgtgggtg ttgtggtgtc gactattgat tactccagac
      661 cacactctat cctggttcca gactctgata taggctatca ttttggtacg cttttggaca
      721 atcatgaagg ggtcgatgtt gttcttagtg tgggaggaga gagatttcat gcacataagt
      781 tggtgttggc tgcacgatct actgtattta gatcaaaatt tttcgatgat gaggatgggg
      841 agaagaatga gcctggtgag aatgatgatg tacaagagat tgttattgat gatatggaac
      901 caaaggtttt caaggcaatg cttcatttta tctacagaga tacacttgtt gatgataacg
      961 agttgggtgg gtcaagctct gagggctcta tcttcgatac attggcagcg aagttgttgg
     1021 ctgcagcaga caagtatgac ttagcaaggc taagattgct atgtgaatct tacttgtgca
     1081 aagccatttc tgtggctaca gttgcaagta ctctagcatt ggctgatcga caccatgcta
     1141 tggagcttaa agctgtttgc ctaaagtttg ctgcagaaaa cctttcagct gtaatccgga
     1201 ccgaaggatt cgattacctc aaggacaact gcccatcact tcaatccgag atactgagaa
     1261 ctctcgccgg ctgcgaagag gagtgcagca gcggcggcaa gagccagagc gtgtggggtc
     1321 agctctcgga tggtggtgac acgagtggcc gtagggttag gccaagaacc taaaagaccc
     1381 accacataac actgaccttg tttagcgagc acctgtgtaa atggcgacat caatatcatc
     1441 tgtatgtgac aaagatgaga tctgatagtt gacttggact tcatctcatc acgctctttt
     1501 tgcatcgtaa ttgctatgct gtttataagt ttagctgatt gtatttgatc ctgtgacccg
     1561 ttgctgctgt gcggacgctt ccataaactc actacaaaat ggtgattttt tgggacttgt
     1621 tcgaatcagc tttcttctgc tagtaacaga tttgttttag ctc
//