LOCUS AK119535 1667 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:001-204-B03, full insert sequence. ACCESSION AK119535 VERSION AK119535.1 KEYWORDS oligo capping; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 1667) AUTHORS Kikuchi,S. TITLE Direct Submission JOURNAL Submitted (31-JAN-2003) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakahama,Y., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Collection, mapping, and annotation of 28K full-length cDNA clones from japonica rice JOURNAL Unpublished (2003) REFERENCE 3 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 32K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Yamamoto,M. and Nakahama,Y. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..1667 /clone="001-204-B03" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..1667 /db_xref="Osa1:LOC_Os12g14070" /note="(Rice Genome Annotation Project) stromal 70 kDa heat shock-related protein, chloroplast precursor, putative, expressed" /note="mapping to R12-TIGRv4S1-000320F (Chr.12: short arm=7985212, long arm=7989230, direction=forward) for TIGR Pseudomol ver4" BASE COUNT 467 a 316 c 455 g 429 t ORIGIN 1 gagaagaaaa acaacgaaac gattcttgtg tttgacttgg gaggcggtac ctttgatgtc 61 tctgtattgg aggttggaga tggtgtgttt gaggtgcttt ccacatctgg tgacacacac 121 cttggtggcg atgacttcga taagaaagtt gtggattggc ttgctagcaa ctttaagaaa 181 gatgaaggca ttgatcttct gaaagacaaa caagccctgc agcgactcac tgaggcagca 241 gagaaagcga agatggaact gtctacgctg tctcagacaa acattagctt gcctttcata 301 actgctactg ctgatgggcc taaacacatc gagacaactc tctccagagc caaatttgag 361 gagctatgtt cggacctcat tgataggctt aaaactcctg tcactaatgc cttgagagat 421 gccaaactgt ctgttgataa cctggacgaa gtgattcttg ttggtggatc cactcgtatc 481 ccttccgtgc aagagcttgt gaagaagatc actggcaagg atcccaatgt cacagtcaac 541 cctgatgagg ttgtttctct tggggcagct gtacagggtg gagttttggc cggagatgtg 601 aaagatgtcg ttcttcttga tgttactcca ttgtctcttg gtctggagac gttgggtgga 661 gtgatgacca agattattcc cagaaacaca acactgccca cctcaaaatc agaggtattc 721 tccacagctg cagatggaca gacaagtgtt gagataaatg ttcttcaggg agagagagag 781 tttgtccggg acaacaagtc tcttggaagc ttccgcttgg atggaatccc tcctgcacca 841 cgtggtgttc cacaaattga agtcaagttt gatattgatg ccaatggtat tctctctgtt 901 gctgctattg ataagggtac tgggaagaaa caggatatca ccatcaccgg cgctagtaca 961 ctgccaaagg atgaggttga gagaatggtg gaagaggctg acaagtttgc tcaggaggac 1021 aaagagaaaa gagatgccat tgataccaaa aaccaggcag actctgtggt ctaccagact 1081 gagaagcaac tgaaggagct aggtgacaag gtacctgcac ctgtgaaaga gaaggtggat 1141 gcaaagctca acgagctcaa agaggccatt gcgggtggat caacacagag catgaaggat 1201 gccatggctg ctttaaacga ggaagttatg cagatcggcc aggccatgta caaccagcag 1261 cctaatgctg gtgctgctgg acctactcct ggagccgatg ctggaccgac aagctcaggc 1321 ggtaagggac cgaatgatgg agatgttatt gatgcggatt tcactgacag caattgatag 1381 ttctagcgat tgaagattat tgatggaagg atgacctgtg gtggatggct gtgagggtct 1441 gatgggtgat ggtataggaa gaagggagtg aacaaattgt tctttttgtt tactatggat 1501 cccatgttca ataggctctt tagtttgcaa tttgatagcg tagggttttg ccaacatttt 1561 cctgtgatgt tgaatgaagg attataaaaa gtagccttca aaaaaagagg aggcaaaggt 1621 tttgatcgaa gaagtagctg attgatatga ccttgttcct tgaaaat //