LOCUS       AK112075                2151 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:001-123-D01, full insert
            sequence.
ACCESSION   AK112075
VERSION     AK112075.1
KEYWORDS    oligo capping; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 2151)
  AUTHORS   Kikuchi,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-SEP-2002) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakahama,Y., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J.,
            Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K.,
            Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H.,
            Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K.,
            Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T.,
            Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y.,
            Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y.,
            Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M.,
            Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Rice full-length cDNA
  JOURNAL   Unpublished (2002)
REFERENCE   3
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 32K full-length cDNA clones from
            japonica rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S.,
            Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N.,
            Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., 
            Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., 
            Li,C., Ohtsuki,K., Shishiki,T., Yamamoto,M. and Nakahama,Y.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., 
            Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., 
            Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., 
            Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., 
            Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., 
            Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences 
            Center and Genome Science Laboratory in Riken: Adachi,J., 
            Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., 
            Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., 
            Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., 
            Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., 
            Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., 
            Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., 
            Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., 
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., 
            Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., 
            Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., 
            Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., 
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., 
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., 
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..2151
                     /clone="001-123-D01"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..2151
                     /db_xref="Osa1:LOC_Os05g44320"
                     /note="(Rice Genome Annotation Project) periodic
                     tryptophan protein 2, putative, expressed"
                     /note="mapping to R05-TIGRv4S1-000944R (Chr.5: short
                     arm=25705596, long arm=25710316, direction=reverse) for
                     TIGR Pseudomol ver4"
BASE COUNT          475 a          580 c          530 g          566 t
ORIGIN      
        1 atgaactacc gcttccacaa cctcctgggc gcgccgtacc gcggcggcga cgccgtcttc
       61 gccggtgact cctccgtcct cctctccgcc gtcggcaacc gcgtcgcgtc caccgacctc
      121 tccgcctcct cctccctcac gctccccttc gagtcctcct ccaacgtcac ccgcctcgcc
      181 gtctccccct cgggcgactt cctcctctcc gtcgacgacg ccggccgcgc gctctacgcc
      241 aacctcggcc gccgcgccgt cctccaccgg atcgccttca agtccgcccc ctccgccgtc
      301 cgcttcagcc ccgacggcaa cctcatcgcc gtcgccgtcg gtaagctcgt ccagatctgg
      361 cgctcgcccg cgttccgcaa ggagttcttc cctttccacc tgctccgcac catccctggc
      421 ttcgccgccg gtgtcaccgc cttcgactgg tctcccgact cctcgttcct cctcgcctcc
      481 tgcaaggacc tcaccgcccg cctcttgcct gtcaagaaag gccttggagg caaaccattc
      541 ctcttcgttg gccaccgcgc cgccgtggtt ggcgccttct tcgccacaga taagaagaca
      601 gggagagtca ctggggctta cacaattacc aaggacggag ctatctttac atggaatttg
      661 gtggaaggaa gtgatgattc gcctccacct tcaccaggga cgccagagca ggaggcggta
      721 caggatggtg aggctgaatt ggacggtgac gagcccgaat tggatggcgg gagcaggaaa
      781 aggaagagtt tcggagaatc ggaagaacca gacactaccc cgctgcattt cacaaggtgg
      841 gagctgcaga aaaaggactt cttcatgcag tcaccggcta agttaacagc ctgtgattac
      901 catagggagc ttgacatggt ggtggttggt ttctctaatg gtgtatttgg gctgtaccag
      961 atgccagact ttgtgtgcct ccacttactg tcaatatcaa gggagaagat cactactgct
     1021 attttcaaca gtttggggaa ttggttagtt tttggatgtg ccaaacttgg gcaattactg
     1081 gtgtgggagt ggcgatcaga gagctacatt ttgaagcagc aggggcacta ctttgatgtg
     1141 aactgcattg catactcacc agactcccaa ttactggcca ctggagctga tgataacaaa
     1201 gtcaaggtct ggacagtctc ctctgggttc tgtttcataa cattttcgga gcatacaaac
     1261 gctgttactg cagttcattt tatggccaat aatcattctc ttctcagtgc ctcccttgat
     1321 gggactattc gagcatggga tctgttccgc tatcgaaatt tcaagacatt tactactgca
     1381 ttgcccagac aatttgtttc tttaacggca gatcagagtg gagaagtaat atgtgctgga
     1441 acacttgatt catttgagat atttgtttgg tcaatgaaga ctggtcgttt gttggatata
     1501 ctcagtggtc accaaggacc agttcatggc ctaatgtttt cgccaatcaa tgctattttg
     1561 gcttcatcat catgggacaa aacagttcgc ctttgggacg tatttgagag caagggtgca
     1621 gtggaaactt ttcaacattc acatgatgtt cttactttgg cttatcgccc tgatggaaga
     1681 cagatagcat gcagcacact agatggctta atccatttct gggatccatt tgacggcctg
     1741 ttgatgtata caattgaagg ccgcagggat attgccgggg gtcgtctcat gactgacaga
     1801 agatctgctg ctaatacaag tataggaaag tacttcacaa cgttgtgcta ttctgctgac
     1861 gggacttata ttttagctgg aggaaacagc aaatatatat gcatgtatga tgttggagaa
     1921 caggtgctct tgcgtagatt ccagatcacc cgcaatctct cgttggacgg agtacttgat
     1981 tttctgaact caaagaagat gacggatgct ggtgtacttt tccttgttgg atcttggatg
     2041 atgtgtgtac acaccttact gaaattttgt cacccagttt tgttgaaacg atccagaaag
     2101 aatatatcat gcatcacaag tatggagtac ttgtgggttt cctaatgcat c
//