LOCUS AK111898 2366 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J013064P06, full insert sequence. ACCESSION AK111898 VERSION AK111898.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 2366) AUTHORS Kikuchi,S. TITLE Direct Submission JOURNAL Submitted (12-SEP-2002) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakahama,Y., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Rice full-length cDNA JOURNAL Unpublished (2002) REFERENCE 3 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 32K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Yamamoto,M. and Nakahama,Y. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..2366 /clone="J013064P06" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..2366 /db_xref="Osa1:LOC_Os05g30870" /note="(Rice Genome Annotation Project) serine/threonine-protein kinase NAK, putative, expressed" /note="mapping to R05-TIGRv4S1-000563F (Chr.5: short arm=17841696, long arm=17849088, direction=forward) for TIGR Pseudomol ver4" BASE COUNT 550 a 571 c 609 g 636 t ORIGIN 1 gatctcactc ttgcccctgg gctgactttt gccctccctt gggcatccat ctcctctccc 61 tccctcccct cccctcccat ccctaccccc aaaatcgccg accgaccgcc cccaaatccc 121 atccaagagc cgtcgcctcc tccaaagatc ggatttcgag accccccaga tcggggggag 181 agatccccgt gtcgtctggt gtggtgggtc ggcctccgcc ccccggccgc cgcgcttctc 241 ttgatctttc tttctttttt ttgatttttt tgcgtttccc ctccgggaga ggggagggga 301 ggagggttct tggatgggct gctttccgtg cttcgggtcg ggcggcaagg gggaggcgaa 361 gaagggcggc ggcgggcgca aggacggcgg ctcggcggat cgccgcgtcg cccgggtcgg 421 atcagataaa tcaaaatcac agggtggatt ggactctagg aaggatgcat tcatcccaag 481 ggatgcgaat ggtcaaccta ttgctgcaca cactttcact tttcgtgaac ttgctgctgc 541 cactaagaac ttcagacaag attgtctatt gggggaggga ggttttggcc gcgtatataa 601 aggacacttg gagaatgggc aggctgttgc agtgaagcaa cttgatcgca atggacttca 661 aggaaataga gagtttctgg ttgaagtcct tatgctcagt ctattgcacc atgataacct 721 ggttaaccta attggatact gtgctgatgg ggatcaacgt ctccttgtat atgagtttat 781 gccattggga tcacttgagg atcatttgca tgatattcca cctgacaagg aacctctcga 841 ctggaataca cggatgaaga ttgctgctgg tgcagccaag ggcttggaat tcttgcatga 901 caaggcaaat cctcctgtta tttacaggga tttcaagtca tcgaacattc ttcttggtga 961 gggataccat ccaaaactat cagactttgg cctggcaaaa cttggccctg ttggtgacaa 1021 aactcatgtt tcgacacgtg ttatgggaac ttatggctac tgtgccccag aatacgcgat 1081 gactgggcag cttactgtta aatctgatgt gtatagtttt ggtgttgtgt tccttgaact 1141 gattactggc cgcaaagcaa tcgacaacac caaaccactt ggagagcaga acctagtggc 1201 atgggcccgt cccctgttta aagaccgcag gaaatttcct aaaatggctg atccattact 1261 tgcgggccga tttcctatgc ggggcctgta tcaggcttta gcagttgctg caatgtgctt 1321 gcaggagcaa gctgccacta ggccttttat aggagatgtg gtcactgctc tttcatatct 1381 tgcttcccag acatatgatc caaatacacc tgttcagcac agtcggagca atgcatctac 1441 ccctagggcc agaaaccgtg ttggtgcgaa ttttgaccag cgtcgtcttc actcaccaaa 1501 tcaccaacaa tctccagatt taaggaaaga aggcaccaca acatcaaaat atgaagctga 1561 ggttagcagg actaattctg gcagtggctc tggtcgacga gctggcttgg acagcatgga 1621 tgtgacaggt tcacagatgg gtagtcctgc tcacgcagga aggaagaggg aatcatcgcg 1681 gagtactgat aggcagcgtg cagtcgcaga ggccaaaaca tggggggaga attcaagaga 1741 aagaaagtgg ccaaatgctc gtggcagctt tgatagtaca aatgagtaaa cctctgaagc 1801 agaaggttca gttaagtcgt cattctaggg gaaaaaaaaa gatgaatcac ttgcagaacc 1861 caactgggtc gaattaggta catggggcat tttcgctcca tctcggctct gcggtctatg 1921 tgaatagagc ttctcttttt cttttttctg tcctggagac accaccgctg cttcagagct 1981 ctcctctcgt ccatacgaat agcatcaccg cgatctcatc gtcgacgcgc ctattcctgg 2041 cgtccattcc tcgtgattga tcatgcaaat gtgcctttta ttcatcatga agacagaaac 2101 accgtttggc tggaaatgta ggtagaaagc aaaagagaaa atttgctctg gagctatcca 2161 ttgggtatct catgtcgatg ttgttgcatg atgagtgtca gcggctgcac cattgttcct 2221 gagtgttcta gctctatgtg aagtgaagtc tgcgtaccga gggatgtgat gttctttttt 2281 cttttctttt cttttctttt tgtctcaatg gtttgtacct agggggtacg gcattttacc 2341 tgtgtttcat acacctgtca tttggc //