LOCUS       AK111864                2608 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J033025G23, full insert
            sequence.
ACCESSION   AK111864
VERSION     AK111864.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 2608)
  AUTHORS   Kikuchi,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-SEP-2002) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakahama,Y., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J.,
            Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K.,
            Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H.,
            Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K.,
            Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T.,
            Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y.,
            Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y.,
            Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M.,
            Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Rice full-length cDNA
  JOURNAL   Unpublished (2002)
REFERENCE   3
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 32K full-length cDNA clones from
            japonica rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S.,
            Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N.,
            Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., 
            Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., 
            Li,C., Ohtsuki,K., Shishiki,T., Yamamoto,M. and Nakahama,Y.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., 
            Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., 
            Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., 
            Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., 
            Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., 
            Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences 
            Center and Genome Science Laboratory in Riken: Adachi,J., 
            Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., 
            Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., 
            Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., 
            Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., 
            Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., 
            Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., 
            Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., 
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., 
            Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., 
            Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., 
            Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., 
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., 
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., 
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..2608
                     /clone="J033025G23"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     CDS             258..2333
                     /db_xref="Osa1:LOC_Os03g12350"
                     /db_xref="RAP-DB:Os03g0224200"
                     /note="(RAP Annotation release2) Similar to Response
                     regulator 8"
                     /note="(Rice Genome Annotation Project) two-component
                     response regulator ARR1, putative, expressed"
                     /note="mapping to R03-TIGRv4S1-000446F (Chr.3: short
                     arm=6491885, long arm=6497626, direction=forward) for
                     TIGR Pseudomol ver4"
                     /protein_id="BAG99452.1"
                     /translation="MAPVEDGGGVEFPVGMKVLVVDDDPTCLAVLKRMLLECRYDATT
                     CSQATRALTMLRENRRGFDVIISDVHMPDMDGFRLLELVGLEMDLPVIMMSADSRTDI
                     VMKGIKHGACDYLIKPVRMEELKNIWQHVIRKKFNENKEHEHSGSLDDTDRTRPTNND
                     NEYASSANDGAEGSWKSQKKKRDKDDDDGELESGDPSSTSKKPRVVWSVELHQQFVNA
                     VNHLGIDKAVPKKILELMNVPGLTRENVASHLQKFRLYLKRIAQHHAGIANPFCPPAS
                     SGKVGSLGGLDFQALAASGQIPPQALAALQDELLGRPTNSLVLPGRDQSSLRLAAVKG
                     NKPHGEREIAFGQPIYKCQNNAYGAFPQSSPAVGGMPSFSAWPNNKLGMADSTGTLGG
                     MSNSQNSNIVLHELQQQPDAMLSGTLHSLDVKPSGIVMPSQSLNTFSASEGLSPNQNT
                     LMIPAQSSGFLAAMPPSMKHEPVLATSQPSSSLLGGIDLVNQASTSQPLISAHGGGNL
                     SGLVNRNPNVVPSQGISTFHTPNNPYLVSPNSMGMGSKQPPGVLKTENSDALNHSYGY
                     LGGSNPPMDSGLLSSQSKNTQFGLLGQDDITGSWSPLPNVDSYGNTVGLSHPGSSSSS
                     FQSSNVALGKLPDQGRGKNHGFVGKGTCIPSRFAVDEIESPTNNLSHSIGSSGDIMSP
                     DIFGFSGQM"
BASE COUNT          657 a          551 c          645 g          755 t
ORIGIN      
        1 gagtcttctc tcttctctct ctctcgtctc tctctccccc acctcttctt ccctttcccc
       61 cgcctccctc tcctcttcgt cgtcacccgc cgcctcccgc tgaatccgcg gcttgggagg
      121 agacgccgga gtcgggggcg tggacggggg ttggatctgc ttgccttgat ggtggcgatt
      181 ggagcgtgaa ttcgtgaggg gggcgtggtg gtggtggtgg tggttatacg gttttcggtt
      241 tcgtgggcgg gggagagatg gcgccggtgg aggatggcgg cggggtggag ttccccgtgg
      301 ggatgaaggt gctggtggtg gacgacgacc ctacatgcct cgccgtgctc aagaggatgc
      361 tcctcgagtg ccgctacgac gcgacaactt gttctcaggc tacaagagca ttaactatgc
      421 tgcgagagaa caggcgtggt tttgatgtta taattagcga tgttcatatg cctgatatgg
      481 acggattcag gttacttgaa cttgttggcc ttgagatgga tctcccagtt attatgatgt
      541 ctgctgattc aaggacagat atcgttatga aaggaataaa acatggagca tgtgactact
      601 taattaaacc cgtcagaatg gaggagttga agaacatctg gcaacatgtt ataaggaaaa
      661 agtttaatga aaacaaggag catgagcatt caggtagcct agatgataca gatcgtacca
      721 gaccaaccaa taacgataat gagtatgctt catctgcaaa tgatggagct gaaggtagct
      781 ggaagtctca gaaaaagaaa cgggataaag atgatgacga tggtgaattg gaaagtggtg
      841 acccttcttc tacatcaaag aaaccaagag ttgtttggtc agttgaactc caccaacaat
      901 ttgtaaacgc agttaatcat ctggggatag acaaagctgt tcccaagaaa attttggagt
      961 tgatgaatgt tcctggttta actagggaaa atgtcgccag ccatttgcag aagttcagat
     1021 tgtatctgaa gaggattgct cagcatcatg ccggaatagc taatccattc tgcccgcctg
     1081 cttctagtgg taaagtaggc tcactgggag gacttgattt ccaagctttg gctgcctcag
     1141 gtcagatccc tcctcaagcc ctggccgcct tgcaggatga gctcctaggg cgacctacaa
     1201 atagtttggt attgcctgga agggaccagt catctttacg gcttgctgca gtcaaaggaa
     1261 acaagcccca tggggagaga gaaatagcat ttggtcaacc tatatacaag tgccagaata
     1321 atgcatatgg ggcattccct caaagcagtc cagctgttgg aggaatgcct tcattttcag
     1381 cttggcccaa taacaaactt ggtatggcag actcaaccgg cacattggga ggcatgagta
     1441 attctcagaa tagcaatata gtcttgcatg aattgcaaca gcagccagat gccatgctgt
     1501 caggaaccct tcactctcta gatgtcaaac cttctgggat agttatgcct tctcagtcat
     1561 taaatacttt ctcagccagt gagggtctct cccctaatca aaataccttg atgatacctg
     1621 ctcagtcatc tggttttcta gcggccatgc ctccatccat gaagcatgaa cctgttcttg
     1681 caacttctca accatcgagt agtctgttag gtggtattga tttggttaat caagcttcaa
     1741 caagtcagcc cttaataagt gcccatggag gggggaatct ttctggcctt gtaaatcgta
     1801 atccaaatgt agtaccttct caagggatca gtacttttca tactccaaat aatccatatt
     1861 tggttagtcc aaattctatg ggaatgggct ccaaacaacc acctggtgtt cttaagacag
     1921 aaaactctga cgctctgaac catagctatg gttatcttgg tggtagcaac ccccctatgg
     1981 actctggctt actctcttca caatcaaaaa atacacagtt tggtttactg ggtcaggatg
     2041 acatcactgg tagctggtcg cctctgccga atgttgacag ttatggtaat actgttgggc
     2101 taagccaccc tgggtccagt tcatctagtt ttcaaagttc taatgtggct cttgggaaat
     2161 tgcctgatca agggcgagga aagaatcatg gatttgttgg taaaggtact tgcattccaa
     2221 gccgctttgc agtggatgag attgaatctc caactaacaa cttgagtcac agcattggaa
     2281 gcagtggaga tattatgagc cctgatattt tcggatttag tggacagatg tgaaggcttc
     2341 ttgaatttgt aagtagggta atcactggaa acaattttta gtgggttgat gaacggttgc
     2401 cgtgtttttc atttcatcct tttttttttc cttctgtaat tggtttataa agggaataat
     2461 ttatgtgaca gcatgtcgaa tcttggttta tagaaggttg ttcggtttaa acaactttgg
     2521 attatttagc ctcatgtgac atagctcatt ttcctttgtt cattttttgt gtacagtttt
     2581 ctgattttgt tgcaaatctt cttctctc
//