LOCUS AK111280 1499 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:002-180-H03, full insert sequence. ACCESSION AK111280 VERSION AK111280.1 KEYWORDS oligo capping; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 1499) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..1499 /clone="002-180-H03" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..1499 /db_xref="Osa1:LOC_Os01g72520" /note="(Rice Genome Annotation Project) hydrolase, acting on ester bonds, putative, expressed" /note="mapping to R01-TIGRv4S1-001985R (Chr.1: short arm=42393128, long arm=42394628, direction=reverse) for TIGR Pseudomol ver4" BASE COUNT 334 a 379 c 407 g 379 t ORIGIN 1 atcacgagct cccctcccca cacaccacct cactcccact acgagagagg aggaagctcg 61 caatcatcga atcaatggcg gttcgccgcc ggcgacccgg ccccgtggcg gccgccgtgc 121 tgctgctact cgcggtggcg acccaggcgg cggcgagccc gataaagacg gtggtggtgg 181 tggtgatgga gaaccggtcg ttcgaccaca tgctggggtg gatgaagcgg ctgaacccgg 241 agatcgacgg cgtgaccggc ggcgagtgga acccgacgaa cgccagcgac ccgtcgtcgg 301 ggcgcgtcta cttcggcgag ggcgccgagt acgtggaccc agacccgggc cactcgttcc 361 aggagatccg gcagcagata ttcgggtcgg acgacgcgtc ggggccggcg aggatggacg 421 gcttcgtgca gcaggcgcgg tcgctggggg acaacatgac ggcggccgtc atgaacggct 481 tctcgccgga cagcgtcgcc gtgtaccggg agctcgtcgg ggagttcgcg gtgttcgacc 541 ggtggttcgc gtccgtgccg tcgtcgacgc agcccaaccg actgttcgtg cactccgcca 601 catccggcgg cgccaccagc aacaacccag agtacgtgca ttattattaa ccttctccta 661 ctatttccgc gtgatatcgc ttttgatgat tcgatatcta tctttgggct ggccgcgaca 721 aatgcgttct gattcgatcg atatatcgtt tgcgtgtgga cgtacgtgat cgaattccaa 781 ccatcgtagt atagttattt caatctgctg ggtttggtgg ccaaaattat tgatgatgga 841 tcaatggtgt tcagactcga gatgagctgt tgttgcactt gcacactagg atacgcacaa 901 actaaatgcg gccgtagtag ttaaaagagt tgcattttga accaaacaga tgccatcttt 961 tgcttaatct gttcaatttt ggatagtggt gatagttatt tttcctttta gccatagtac 1021 tgatagttct gctagcataa ttaaccttgt agaatctgaa ctgcggttgt acgtacaata 1081 tactgtgggt agtatctgaa ttttgaaata tatatactgc gggtagtatc tgaagtactc 1141 actaagttca ggtatcagtt gtcaactagc ggtcaaattg cacccttttt ttttttcaaa 1201 gtcacgtggc gattttacgc ctgcgcctct acacgcaatt aaggggattc tctgctgcaa 1261 gcacaagcta gcttcttctg ctgacgtaca gtagaaacat tgctagagtt ctctctgtct 1321 tgttcctttc cattcaaaag tacactagga tatcagagtc acacagagca gtcactgtat 1381 gtaccatttt tgggcggtgc tttgtgcttc cctgtacaaa atctgaaaga gaaagattgt 1441 actaggcaga aagccgacct accaatacca tagtaaagtt taaattcttg tggtcgctc //