LOCUS AK109842 1500 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:002-148-E02, full insert sequence. ACCESSION AK109842 VERSION AK109842.1 KEYWORDS oligo capping; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 1500) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..1500 /clone="002-148-E02" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" CDS 56..1393 /db_xref="Osa1:LOC_Os06g08580" /db_xref="RAP-DB:Os06g0184900" /note="(RAP Annotation release2) Transferase family protein" /note="(Rice Genome Annotation Project) anthranilate N-benzoyltransferase protein 1, putative, expressed" /note="mapping to R06-TIGRv4S1-000253F (Chr.6: short arm=4268116, long arm=4269615, direction=forward) for TIGR Pseudomol ver4" /protein_id="BAG98925.1" /translation="MAVEIVKSSMVTAGEATPEHRIWLSNLDLLVARSHTPTVYVYRR TGPDSDAAFFSPDVLKAALSKVLVPFYPLAGRLAQDSAGRPEISCTGEGVLFVTARSG ATIDDLGDLAPSDELRRMLVPAADVAAASILAMFQVTFFRCGGVCLGAAIHHTAADGL AALDFVNTWAAIARDVAGDGEAAAAAVQRPWLDRTLLRARSPPAVRFDHAEYSRRRGG GSKLPFDSAILPMSKNQLNALKGAGAGAGKRLSTFTAVVAHVWRCACKARGLAVAGTE AATRLYMTADARTRLHPPLPRGYLGNAIFRASAVSKVSDIVAAGPLGAVAEKVSAATA RLDDGYVRSLLDHLEQTAAAASGGAAGLRKGEWVMPESDLWVISWQGLPLYDADFGWG RPAFMGRACLQFSGLVYLVPGRDDGDGRLDVVVAMDPESLAKFKDVFYEELKC" BASE COUNT 233 a 505 c 505 g 257 t ORIGIN 1 gcaaaacacg tgacaagtag agtggagtag tagagaaaag catcttctcg catccatggc 61 agtggagatc gtcaagtcct ccatggtgac ggccggcgag gcgacgccgg agcacaggat 121 atggctctcc aacctcgacc tgctggtggc caggagccac acccccaccg tctacgtcta 181 ccggcgaact ggccccgact ccgacgcggc gtttttctcg ccggacgtcc tcaaggccgc 241 cctgtccaag gtgctcgtcc ccttctaccc cctcgccggc cgcctcgctc aggacagcgc 301 cggcaggccg gagatcagct gcaccggcga gggcgtgctc ttcgtcacgg cgcggagtgg 361 cgccaccatt gacgacctgg gcgacctcgc cccgtcggac gagctccggc ggatgcttgt 421 cccggcggcc gatgtcgccg ctgccagcat cttggccatg ttccaggtga cgttctttag 481 gtgtggaggg gtgtgcctgg gcgcggcgat ccatcacacg gcggcggacg gcctcgcggc 541 gctggacttc gtcaacacgt gggccgccat tgcgagggac gtcgccggcg acggcgaggc 601 ggcggcggcg gcggtgcagc ggccgtggct cgaccgcacg ctcctccgcg cgcgctcccc 661 tcccgccgtg cgcttcgacc acgccgagta ctcccgtcgc cgcggcggcg gttcaaagct 721 gccgttcgac tcggccatcc tccccatgtc caagaaccag ctcaacgcgc tcaagggcgc 781 cggcgccggc gccggcaaga ggctgtccac ttttacggcg gtggtcgcgc acgtgtggcg 841 gtgcgcgtgc aaggcgcgcg ggctcgccgt cgccggaacg gaggcggcga cgaggctgta 901 catgaccgcc gacgcgcgca cccgcctgca cccgccgctc ccgcgcggct acctcggcaa 961 cgccatcttc cgcgcgtcgg cggtgtccaa ggtgagcgac atcgtcgccg ccgggccgct 1021 cggcgccgtc gcggagaagg tgtccgccgc caccgcgcgg ctcgacgacg gctacgtccg 1081 gtcgctgctg gaccacctgg agcagacggc ggcggcggcg agcggcggcg cggcggggct 1141 ccgcaagggg gagtgggtga tgccggagag tgacctgtgg gtgatcagct ggcaggggct 1201 gccgctctac gacgccgact tcggctgggg gcggccggcg ttcatggggc gtgcgtgcct 1261 ccagttcagc ggcctcgtct acctcgtgcc aggccgagac gacggcgacg gccggctcga 1321 cgtcgtcgtg gccatggacc ccgagagcct tgccaagttc aaggatgtgt tctatgagga 1381 gctcaagtgt tagctccatt cgagctcaac accaactttt ttttttaatt aagccgaatt 1441 tataacgatt ttgttaaaaa tatattgatt tttcccgaaa aaaaaatatt gatttctgtc //