LOCUS       AK109788                2846 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:002-147-D03, full insert
            sequence.
ACCESSION   AK109788
VERSION     AK109788.1
KEYWORDS    oligo capping; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 2846)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..2846
                     /clone="002-147-D03"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..2846
                     /db_xref="Osa1:LOC_Os04g35890"
                     /db_xref="RAP-DB:Os04g0439600"
                     /note="(RAP Annotation release2) Regulator of chromosome
                     condensation/beta-lactamase-inhibitor protein II domain
                     containing protein"
                     /note="(Rice Genome Annotation Project) protein kinase,
                     putative, expressed"
                     /note="mapping to R04-TIGRv4S1-000511R (Chr.4: short
                     arm=21691556, long arm=21694400, direction=reverse) for
                     TIGR Pseudomol ver4"
BASE COUNT          376 a          939 c         1011 g          520 t
ORIGIN      
        1 attttcccct tctccatctt cttcctcctc ctccccaact cgcgccaaca atggtcgtct
       61 ccacaaactc ctcctcctcc tcctctcctc caacccaatg tctccacctc acctcctcct
      121 cctcctccta gccctcctcc tctcgccgcc cctcctcctc gcctcctcct ccttccccct
      181 ccccaccatc gccatcgccg ccgtctccaa ctccagctcc aacccctcca agcagcatct
      241 cgcgtgcggg ctcgtgccgg cggcgggggg cgcggcggcg gggtacagga tctcgtgcgc
      301 cagcgtgtcg aacaggtcgg cggcggcgcc gcacgtgtac gcgtatggcg gggacgggac
      361 gtgctcgccg tactcggcgg tggtcgccgg ggacgggtac ctgtgctcgg ctgcgccgac
      421 gtcgtcgccg ccaatgtcga tgcggtggtg ggatctgaac gaggccgggg atgcgtcgaa
      481 gcgggtgtac agggggcggg tgctctcggc ggtgtccggc ggcggggagt ccgtgtgcgg
      541 gctcgtcggg gagaggatgc agtgctggag gtgcccgtgg ggggagggcg cgccggcgag
      601 ggtggggttc tcggcggtgg cggtgggtgg cgggttcgtg tgcgggttgg tggtggggag
      661 cggggaggtg aggtgctatg gtggagggga ggtggtgggg agggagcccg cggggaggag
      721 gttcatgctg ctcgccgccg gcgagaggca cgcgtgcggc gtggatgatg gcggggtggt
      781 gggttgctgg ggggaggcgg cggcggtggc ggccgcgtcg ccgccgagga tcagccgcgc
      841 ggtgtcgacg gtggcggtgg gcgacgcggt cacgtgcgtg ctgtggggga actggacggt
      901 ctcgtgctgg cccgaggggg aggcgtcgcc gccgccggcg ctggcggggc agcagttcgt
      961 cgcgctggag gcgaagggga aggtggtgtg cggggtgctc atgtccgact actcgctgca
     1021 gtgctggggc gcaggcgtcg cgggcggggt gaggaaggtg ttcgacaagg tgctcccggg
     1081 tccgtgcgcg ccgtcgaagt cgtgctcgtg cggcgtctgg tcgggctccg cgcagctctg
     1141 cgccggcagc ggcgggggag gcggcggaga cgtgtccgtt tgttacccct gcggctacac
     1201 ccctcctccg atggcgctgt ccccgacgtc caactcgtcg tcgtcgtcga gctctcaatc
     1261 gaaggggaag cgtcgcccga gcaatctggc gatagcgttg atcagcgccg gagctggatc
     1321 ggcgctcgtg gcgctcctcg ccgcgctcgc ggcggtttac tacctgcgcc ggcaccgtgg
     1381 cagcagctcg ccggtctccg ggcgcatcca cgccgagccg acgggcacgg cgccgcgcgt
     1441 ggagcggcgg ctcagcgcgc tgctctccaa gggcccgaac acgacggtcg agcagttccc
     1501 gctggtggcg ctccgcgccg ccaccgactg cttctcgccg gcgaagcgca tcggctccgg
     1561 cagcttcggc gcggtgtacc gcgcgtccct ccccgacggc cgcgaggtcg ccatcaagcg
     1621 cgccgagcgc cgcgacacgg ggggcccttc ctcctcctcc gccgccgcgg cgcggcgcgt
     1681 cgaccacgag gcggcattcg tctccgagct cgcgctcctc tcccgcgtca accacaagaa
     1741 cctggtccgc ctcctcggct tctgcgccga cggcggcgag cgcatcctcg tctacgagtt
     1801 catgcccaac ggcaccctcc acgaccacct ccacaggcgt gcggcgtcgg cggcggcgcc
     1861 gctctccccg ccgctcgcct cctggccgtc ccgcctccgc ctcgcgctcg gcgccgcccg
     1921 cggcatcgag tacatgcaca cctacgccgt cccgcccatc atccaccgcg acatcaagtc
     1981 ctccaacatc ctcctcgact cctgctggac cgccaaggtc tccgacttcg gcctctccct
     2041 cctcaacacc ctggacggtg acaatgccgc cgccggcgac ggaggcaatg ccggcgacgg
     2101 agacgacgag gagcggtgcg tgacggcggg gacggtgggg tacatggacc cggagtacta
     2161 caggctgcag cacctgacgg acaagagcga cgtgtacagc ttcggcgtcg tgctgctgga
     2221 gctgctgtcc gggtgcaagg caatccagaa gtacgagggc agcggctcgc ccaagaacgt
     2281 ggtggacatg gccgtgccgc acatcgaggg cgaccgggtg caccgggtgc tcgacgcgag
     2341 gctgccgctg ccgacgccgt gggagatgga ggccgtcgcc tacgtcggct acctggcggc
     2401 cgactgcgtc aggctggccg gccgcgaccg ccccaccatg agcgaggtcg tgggcgtgct
     2461 cgagcgggcc gtggcggcgt gcgacgagta cgaggaaggc ggcgccggcg ccggcggcga
     2521 gcccgcgctg tcgcggtcgt gcaccgatgg gtccacggcg acgtgacgtg gcatgtcgtg
     2581 gaatggaatg cccccatttg catggttggc ctcccttgcg caagaacaac ggggaggaga
     2641 gttttctttt gaggattttt tgtttgtttt attgttattg cttagcatta gtcacagaac
     2701 attcattagt attttataga aaagaatcaa aattttagtg taaatggtct tctgacattg
     2761 ttttgatttg aaatattttt gggttttctc cccccttttt tgttcttttc tggtcttaat
     2821 atacatatat tgaagtcttc ctcgac
//