LOCUS AK107481 1716 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:002-129-C02, full insert sequence. ACCESSION AK107481 VERSION AK107481.1 KEYWORDS oligo capping; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 1716) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..1716 /clone="002-129-C02" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..1716 /db_xref="Osa1:LOC_Os07g37830" /note="(Rice Genome Annotation Project) peptidyl-prolyl cis-trans isomerase CYP37, chloroplast precursor, putative, expressed" /note="mapping to R07-TIGRv4S1-000754F (Chr.7: short arm=22687204, long arm=22691556, direction=forward) for TIGR Pseudomol ver4" BASE COUNT 423 a 424 c 459 g 410 t ORIGIN 1 agctcactgg ctggggatag acgagacggc gaccacgacg atgacgatga cgacgacgac 61 ggcgacggca gcaacggcat ccccaccacc acccccatct ccggttcctc ccctccccgc 121 gtctcaaccc accggaaatc cattcaaaag cacccgcgct ctcgcaccaa tccaccgcac 181 gccatggcgt cgcgagcggc ggccgcgatg gtgctcgccg gtgcccttcc tgtgtttccc 241 ggccgtcccc tggtcgcagc cggcgccagg tgctgcgacg gcggcattcg cgggagggtc 301 tcctgctcct cccaccgtcg ctcggaccat ccctcctgcg cggctgaggt gagcacgcgc 361 tggttgctgg tctctcctca tccaaatggc ttccaaagct gtagcgttcg cttcagttta 421 atcgtgtggt tgtctggttt ggtgcaggag ggaggagtgg tggagctgct caagggcgcg 481 gtcgcggcgc tcgccgtcat cgcccagatt tccgtgtcgc tcccggcgga cgcgatcctc 541 tactcgccgg acacgaacgt gccgaggacg ggggagctgg cgctgaggag ggccatcccc 601 gcgaacccaa acatgaagac catacaggaa tcgctggagg acatttcgta tttgctgagg 661 ataccgcaga ggaagccgta tggctccatg gaaggagacg taaaaaaggc catgaagata 721 gcaatggaca acaaggatgc gatcttggca agtatacctg tagaactcaa ggaaaagggc 781 tcgaagttat atacctcctt gcttgaagag aagggtggtt tgcaaactct cttgaaatat 841 ataaaggaaa atgatcctga cagactttcg gttgcacttg cttcttctct tgatactgtt 901 gctgaattgg agctgttaca ggctccaggt ttatccttcc tcttaccaca acaatatttg 961 gaatatccaa ggctagcagg aagaggagtt gttgaattct cagtggagaa aggtgatggt 1021 tcaacattct ttccaactgc tggtggtgaa ccaaaaagtg ttgctacaat tcaggtagtg 1081 attgatggat attctgcccc actgactgct ggaaactttg cgaaattggt gttggatggg 1141 gcatatgatg ggataaaact gaaatgtgca agtcaggcaa ttattgcaga caacgagaat 1201 ggaaagaaag gttacactgt tccattagag gtcatgcctg ctgggcagtt tgaaccgtta 1261 tacagaactc cgctaagtat tcaggatgga gaattgccag tccttccgat gtctgtatat 1321 ggtgccgttg ctatggccca tagtgtggat tctgatgaat actcgtcacc aagccaattc 1381 ttcttctatc tgtatgacaa gagaaattct ggtttaggag gaatatcttt tgatgaaggg 1441 cgattctcag tattcgggta taccacagat ggaagagaag ttctgtcgca gattaaaact 1501 ggagatataa ttcgttctgc caagcttgta caaggtagag agcgccttgt actgcctcca 1561 gaagcgccgg cagagagctg atacaacggc aagcttcgca aactggaaac attctttcat 1621 tggtcaggag acttagcata ttttatacca taaatcatgt aaacctgact gagcagttca 1681 tcaaatttat atatagaatc actgcaaatg ttcatc //