LOCUS       AK107481                1716 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:002-129-C02, full insert
            sequence.
ACCESSION   AK107481
VERSION     AK107481.1
KEYWORDS    oligo capping; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 1716)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..1716
                     /clone="002-129-C02"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..1716
                     /db_xref="Osa1:LOC_Os07g37830"
                     /note="(Rice Genome Annotation Project) peptidyl-prolyl
                     cis-trans isomerase CYP37, chloroplast precursor,
                     putative, expressed"
                     /note="mapping to R07-TIGRv4S1-000754F (Chr.7: short
                     arm=22687204, long arm=22691556, direction=forward) for
                     TIGR Pseudomol ver4"
BASE COUNT          423 a          424 c          459 g          410 t
ORIGIN      
        1 agctcactgg ctggggatag acgagacggc gaccacgacg atgacgatga cgacgacgac
       61 ggcgacggca gcaacggcat ccccaccacc acccccatct ccggttcctc ccctccccgc
      121 gtctcaaccc accggaaatc cattcaaaag cacccgcgct ctcgcaccaa tccaccgcac
      181 gccatggcgt cgcgagcggc ggccgcgatg gtgctcgccg gtgcccttcc tgtgtttccc
      241 ggccgtcccc tggtcgcagc cggcgccagg tgctgcgacg gcggcattcg cgggagggtc
      301 tcctgctcct cccaccgtcg ctcggaccat ccctcctgcg cggctgaggt gagcacgcgc
      361 tggttgctgg tctctcctca tccaaatggc ttccaaagct gtagcgttcg cttcagttta
      421 atcgtgtggt tgtctggttt ggtgcaggag ggaggagtgg tggagctgct caagggcgcg
      481 gtcgcggcgc tcgccgtcat cgcccagatt tccgtgtcgc tcccggcgga cgcgatcctc
      541 tactcgccgg acacgaacgt gccgaggacg ggggagctgg cgctgaggag ggccatcccc
      601 gcgaacccaa acatgaagac catacaggaa tcgctggagg acatttcgta tttgctgagg
      661 ataccgcaga ggaagccgta tggctccatg gaaggagacg taaaaaaggc catgaagata
      721 gcaatggaca acaaggatgc gatcttggca agtatacctg tagaactcaa ggaaaagggc
      781 tcgaagttat atacctcctt gcttgaagag aagggtggtt tgcaaactct cttgaaatat
      841 ataaaggaaa atgatcctga cagactttcg gttgcacttg cttcttctct tgatactgtt
      901 gctgaattgg agctgttaca ggctccaggt ttatccttcc tcttaccaca acaatatttg
      961 gaatatccaa ggctagcagg aagaggagtt gttgaattct cagtggagaa aggtgatggt
     1021 tcaacattct ttccaactgc tggtggtgaa ccaaaaagtg ttgctacaat tcaggtagtg
     1081 attgatggat attctgcccc actgactgct ggaaactttg cgaaattggt gttggatggg
     1141 gcatatgatg ggataaaact gaaatgtgca agtcaggcaa ttattgcaga caacgagaat
     1201 ggaaagaaag gttacactgt tccattagag gtcatgcctg ctgggcagtt tgaaccgtta
     1261 tacagaactc cgctaagtat tcaggatgga gaattgccag tccttccgat gtctgtatat
     1321 ggtgccgttg ctatggccca tagtgtggat tctgatgaat actcgtcacc aagccaattc
     1381 ttcttctatc tgtatgacaa gagaaattct ggtttaggag gaatatcttt tgatgaaggg
     1441 cgattctcag tattcgggta taccacagat ggaagagaag ttctgtcgca gattaaaact
     1501 ggagatataa ttcgttctgc caagcttgta caaggtagag agcgccttgt actgcctcca
     1561 gaagcgccgg cagagagctg atacaacggc aagcttcgca aactggaaac attctttcat
     1621 tggtcaggag acttagcata ttttatacca taaatcatgt aaacctgact gagcagttca
     1681 tcaaatttat atatagaatc actgcaaatg ttcatc
//