LOCUS       AK107427                1765 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:002-128-A03, full insert
            sequence.
ACCESSION   AK107427
VERSION     AK107427.1
KEYWORDS    oligo capping; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 1765)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..1765
                     /clone="002-128-A03"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..1765
                     /db_xref="Osa1:LOC_Os05g48060"
                     /db_xref="RAP-DB:Os05g0554400"
                     /note="(RAP Annotation release2) Phosphatidyl serine
                     synthase family protein"
                     /note="(Rice Genome Annotation Project)
                     phosphatidylserine synthase 2, putative, expressed"
                     /note="mapping to R05-TIGRv4S1-001048F (Chr.5: short
                     arm=27469518, long arm=27474950, direction=forward) for
                     TIGR Pseudomol ver4"
BASE COUNT          386 a          404 c          449 g          526 t
ORIGIN      
        1 tcatccaacc caagtaccca acccgcgtcg tcatcgtcgt cttcctactt cctcctcctc
       61 cccaccccac gcacgcgcgt gcggcgccga tcgcggccga cgccgagatt tccgcgtgcg
      121 cgtggagata gggcacaccc cttctctctc tccctctctc gggctctgaa gcgcttcgct
      181 tggtttggcg tgttgtttgg ctgccgcggc agttttctcc tgtcacatat cgcagagggt
      241 tctggaagtg ggaacatgga ggcgaagcag aggacgaggc atcgcgacgg agaggagagg
      301 aggctcgtag cggcggcgga tggcggcgcc gaggagtacg acccatggac ggcgtggctc
      361 tacaagccgc acaccatctc ggtgctcctc gtcggtgctt gccttctaat ttgggcaagt
      421 ggagcgcttg atccagaggg tgcttcttat cacagtagtg cgacatctat taagaggggt
      481 gtctgggcta tgattgcagt cttccttgct tactgcactc tccaagcacc ttcaacgata
      541 cttattaggc cccatcctgc tgtctggcgc ctggtgctcg gactggctgt cgtttacctt
      601 gtcgctctag cctttcttct tttccagaac cgcgatgatg ctcgccagtt catgaaacac
      661 ctttaccctg atcttggagt tgaattgccg gagagatctc atggagctga ctgccgtctg
      721 tatgttccgg aaaaccctaa aaacaagttc ataaatattt atacattatt tgacgaattt
      781 gtggttgccc atattttggg ttggtggggt aaagccgtaa tgatacgaaa ccagcttctt
      841 ctttgggtcc tctcgattgg tttcgagcta atggagctta cattcagaca tatgttgcca
      901 aactttaatg agtgctggtg ggatagtatt attttggata tcttgatctg caactggttt
      961 ggtatatggg cggggatgca cacagtccgt tactttgacg gtaaaacata tgagtgggtt
     1021 ggactgagcc gacagccaag catcatgggc aaggtgaaaa gatcactgag ccagttcacc
     1081 cctgcacaat gggacaagga tcaatggtac cctttcatgg ggccgttgcg gttcgttcaa
     1141 gtgttgttcc tgtgcgttgt tttcatgaca gtggagctca acacattttt tcttaaattt
     1201 tgcctctgga ttcctccaag gaatcctttg gttgtgtaca gattaatcct atggtggttg
     1261 attgctattc caaccatccg tgagtacaac tcctacttgc aaaacagcaa accggtgaag
     1321 aaggttgggg ctttttgctg gctctctcta gctatatgca ttgtagagct tcttatatgt
     1381 atgaagtttg gacatgggct gtttcatgat cccatgccta cttggttgat catcttttgg
     1441 agttcggtgg gggtagcact agtggttttc ttgcttgcat ggtcttggag gaatcacctg
     1501 aaatatcaga gaaagcggct ataatggatt aatttttcgg aagattttcg actctggacc
     1561 cccttcaaac ttgtttcttc ttcttgatag gatgtacata tgtgatgggt gatgatgtaa
     1621 cttaaatgtg atgggtaatt atgtaacttt aaatcctagg ataaagcaat tttcagctac
     1681 atttcacatt atgttttaca atagccaatt gttgcctcgc aagagggatg gctaatttca
     1741 gattaataag tgaaatatta ccatg
//