LOCUS AK107427 1765 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:002-128-A03, full insert sequence. ACCESSION AK107427 VERSION AK107427.1 KEYWORDS oligo capping; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 1765) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..1765 /clone="002-128-A03" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..1765 /db_xref="Osa1:LOC_Os05g48060" /db_xref="RAP-DB:Os05g0554400" /note="(RAP Annotation release2) Phosphatidyl serine synthase family protein" /note="(Rice Genome Annotation Project) phosphatidylserine synthase 2, putative, expressed" /note="mapping to R05-TIGRv4S1-001048F (Chr.5: short arm=27469518, long arm=27474950, direction=forward) for TIGR Pseudomol ver4" BASE COUNT 386 a 404 c 449 g 526 t ORIGIN 1 tcatccaacc caagtaccca acccgcgtcg tcatcgtcgt cttcctactt cctcctcctc 61 cccaccccac gcacgcgcgt gcggcgccga tcgcggccga cgccgagatt tccgcgtgcg 121 cgtggagata gggcacaccc cttctctctc tccctctctc gggctctgaa gcgcttcgct 181 tggtttggcg tgttgtttgg ctgccgcggc agttttctcc tgtcacatat cgcagagggt 241 tctggaagtg ggaacatgga ggcgaagcag aggacgaggc atcgcgacgg agaggagagg 301 aggctcgtag cggcggcgga tggcggcgcc gaggagtacg acccatggac ggcgtggctc 361 tacaagccgc acaccatctc ggtgctcctc gtcggtgctt gccttctaat ttgggcaagt 421 ggagcgcttg atccagaggg tgcttcttat cacagtagtg cgacatctat taagaggggt 481 gtctgggcta tgattgcagt cttccttgct tactgcactc tccaagcacc ttcaacgata 541 cttattaggc cccatcctgc tgtctggcgc ctggtgctcg gactggctgt cgtttacctt 601 gtcgctctag cctttcttct tttccagaac cgcgatgatg ctcgccagtt catgaaacac 661 ctttaccctg atcttggagt tgaattgccg gagagatctc atggagctga ctgccgtctg 721 tatgttccgg aaaaccctaa aaacaagttc ataaatattt atacattatt tgacgaattt 781 gtggttgccc atattttggg ttggtggggt aaagccgtaa tgatacgaaa ccagcttctt 841 ctttgggtcc tctcgattgg tttcgagcta atggagctta cattcagaca tatgttgcca 901 aactttaatg agtgctggtg ggatagtatt attttggata tcttgatctg caactggttt 961 ggtatatggg cggggatgca cacagtccgt tactttgacg gtaaaacata tgagtgggtt 1021 ggactgagcc gacagccaag catcatgggc aaggtgaaaa gatcactgag ccagttcacc 1081 cctgcacaat gggacaagga tcaatggtac cctttcatgg ggccgttgcg gttcgttcaa 1141 gtgttgttcc tgtgcgttgt tttcatgaca gtggagctca acacattttt tcttaaattt 1201 tgcctctgga ttcctccaag gaatcctttg gttgtgtaca gattaatcct atggtggttg 1261 attgctattc caaccatccg tgagtacaac tcctacttgc aaaacagcaa accggtgaag 1321 aaggttgggg ctttttgctg gctctctcta gctatatgca ttgtagagct tcttatatgt 1381 atgaagtttg gacatgggct gtttcatgat cccatgccta cttggttgat catcttttgg 1441 agttcggtgg gggtagcact agtggttttc ttgcttgcat ggtcttggag gaatcacctg 1501 aaatatcaga gaaagcggct ataatggatt aatttttcgg aagattttcg actctggacc 1561 cccttcaaac ttgtttcttc ttcttgatag gatgtacata tgtgatgggt gatgatgtaa 1621 cttaaatgtg atgggtaatt atgtaacttt aaatcctagg ataaagcaat tttcagctac 1681 atttcacatt atgttttaca atagccaatt gttgcctcgc aagagggatg gctaatttca 1741 gattaataag tgaaatatta ccatg //