LOCUS       AK106859                1729 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:002-118-C01, full insert
            sequence.
ACCESSION   AK106859
VERSION     AK106859.1
KEYWORDS    oligo capping; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 1729)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..1729
                     /clone="002-118-C01"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..1729
                     /db_xref="Osa1:LOC_Os07g01340"
                     /db_xref="RAP-DB:Os07g0103500"
                     /note="(RAP Annotation release2) 2OG-Fe(II) oxygenase
                     domain containing protein"
                     /note="(Rice Genome Annotation Project) gibberellin
                     2-beta-dioxygenase 7, putative, expressed"
                     /note="mapping to R07-TIGRv4S1-000010F (Chr.7: short
                     arm=212076, long arm=217842, direction=forward) for TIGR
                     Pseudomol ver4"
BASE COUNT          403 a          498 c          467 g          361 t
ORIGIN      
        1 cttccactgt gttcctaatt ccttccctgc aattattggt tgctgcttca cttgatctta
       61 ttggcaacca gctagctaag cttatacaca cccacggcca gacctgaacc ttctacctac
      121 taccgcacaa aaacaacaag ctacctagct ctctaacaac aatctcattt gcatgaatcg
      181 caggagatcg atagtagcta ctagttagca agttcatata tagatcgatc tatgatcgat
      241 gctagctagc taatagtatc atcgatcggg aaaacagaca caaattagag ctagctagag
      301 cccccgccgg ccgggtcgac gtactgctgc taatcaatag ccagcacaag acgtgggaat
      361 tgattaaggc gcatgcaggc agggcggagt taataattaa tggaggagca cgactacgac
      421 tccaactcga acccgccgtt gatgagcacg tacaagcacc tgttcgtgga gcagcaccgc
      481 ctggacatgg acatgggcgc catcgacgtc gacgagtgcg agctccctgt gatcgacctc
      541 gcggggctca tggaggcgga gcaggtgtgc cgcgcagaca tggtgcgtgc ggcgtcggaa
      601 tggggcttct tccaggtgac caaccacggc gtgccgcagg cgctgctgcg cgagctgcac
      661 gacgcacagg tggccgtgtt ccggcggccc ttccaggaga aggtgaccga gaggctgctc
      721 ggcttctcgc cggagagcta ccggtgggga acgccgacgg ccaagtgcct ggagcagctg
      781 tcgtggtcgg aggcctatca catcccaatg acgacgccca ggcccagcac gagcatcagg
      841 gccagggcgg tgatcgagga ggtgtcgagg gcgatgtacg agctggcgca gaagctggca
      901 gagatcctga tgagagggct gccgggcgcc ggcgagggcg agacgatggt gacgacgcgg
      961 gaggagacgt gcttcctgcg gctgaaccgg tacccaccgt gcgccatggc catggggggc
     1021 ttcgggctgt gcccgcacac ggacagcgac ttgctcacca tcgtgcacca gcagcaggac
     1081 accgtcggcg gcctccagct gctcaagggc ggcaggtggg tggccgtgaa gcccagcccc
     1141 agcaccctca tcgtcaacgt cagcgacctc ctgcaggcgt ggagcaacga tgtgtacaag
     1201 agcgtggagc acagggtgat ggccaacgcc acgctggagc gcttctccat ggccttcttc
     1261 ctctgcccct cctaccacac gctcatcatc ccaagcagca gccatgtcca cgacgacgat
     1321 gcccattacc ggagcttcac cttcggcgag tacaggaagc agatcatgga ggacgtcagg
     1381 agcacaggcc gcaagattgg actgcaccgc tttcgaaccc gatagataga tccacctgac
     1441 ctacataccc gccctactcc tactatatat atcaaatcac cactgctata atgcattata
     1501 ctcgatccac tatgcatttt tcatcgccac aatatgcatg tacctagcca ataattaatt
     1561 aagctgcact ttgcttactt attgctagct tgctactgca tcgatctata tgcatgtaca
     1621 cacatttcat tgccttagca gtgtatgtat atgcattatt ttttccttat ttgcccttag
     1681 cttgcagatt tcatagcagc taatatatat ccgtcggaat tatttgaac
//