LOCUS AK106859 1729 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:002-118-C01, full insert sequence. ACCESSION AK106859 VERSION AK106859.1 KEYWORDS oligo capping; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 1729) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..1729 /clone="002-118-C01" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..1729 /db_xref="Osa1:LOC_Os07g01340" /db_xref="RAP-DB:Os07g0103500" /note="(RAP Annotation release2) 2OG-Fe(II) oxygenase domain containing protein" /note="(Rice Genome Annotation Project) gibberellin 2-beta-dioxygenase 7, putative, expressed" /note="mapping to R07-TIGRv4S1-000010F (Chr.7: short arm=212076, long arm=217842, direction=forward) for TIGR Pseudomol ver4" BASE COUNT 403 a 498 c 467 g 361 t ORIGIN 1 cttccactgt gttcctaatt ccttccctgc aattattggt tgctgcttca cttgatctta 61 ttggcaacca gctagctaag cttatacaca cccacggcca gacctgaacc ttctacctac 121 taccgcacaa aaacaacaag ctacctagct ctctaacaac aatctcattt gcatgaatcg 181 caggagatcg atagtagcta ctagttagca agttcatata tagatcgatc tatgatcgat 241 gctagctagc taatagtatc atcgatcggg aaaacagaca caaattagag ctagctagag 301 cccccgccgg ccgggtcgac gtactgctgc taatcaatag ccagcacaag acgtgggaat 361 tgattaaggc gcatgcaggc agggcggagt taataattaa tggaggagca cgactacgac 421 tccaactcga acccgccgtt gatgagcacg tacaagcacc tgttcgtgga gcagcaccgc 481 ctggacatgg acatgggcgc catcgacgtc gacgagtgcg agctccctgt gatcgacctc 541 gcggggctca tggaggcgga gcaggtgtgc cgcgcagaca tggtgcgtgc ggcgtcggaa 601 tggggcttct tccaggtgac caaccacggc gtgccgcagg cgctgctgcg cgagctgcac 661 gacgcacagg tggccgtgtt ccggcggccc ttccaggaga aggtgaccga gaggctgctc 721 ggcttctcgc cggagagcta ccggtgggga acgccgacgg ccaagtgcct ggagcagctg 781 tcgtggtcgg aggcctatca catcccaatg acgacgccca ggcccagcac gagcatcagg 841 gccagggcgg tgatcgagga ggtgtcgagg gcgatgtacg agctggcgca gaagctggca 901 gagatcctga tgagagggct gccgggcgcc ggcgagggcg agacgatggt gacgacgcgg 961 gaggagacgt gcttcctgcg gctgaaccgg tacccaccgt gcgccatggc catggggggc 1021 ttcgggctgt gcccgcacac ggacagcgac ttgctcacca tcgtgcacca gcagcaggac 1081 accgtcggcg gcctccagct gctcaagggc ggcaggtggg tggccgtgaa gcccagcccc 1141 agcaccctca tcgtcaacgt cagcgacctc ctgcaggcgt ggagcaacga tgtgtacaag 1201 agcgtggagc acagggtgat ggccaacgcc acgctggagc gcttctccat ggccttcttc 1261 ctctgcccct cctaccacac gctcatcatc ccaagcagca gccatgtcca cgacgacgat 1321 gcccattacc ggagcttcac cttcggcgag tacaggaagc agatcatgga ggacgtcagg 1381 agcacaggcc gcaagattgg actgcaccgc tttcgaaccc gatagataga tccacctgac 1441 ctacataccc gccctactcc tactatatat atcaaatcac cactgctata atgcattata 1501 ctcgatccac tatgcatttt tcatcgccac aatatgcatg tacctagcca ataattaatt 1561 aagctgcact ttgcttactt attgctagct tgctactgca tcgatctata tgcatgtaca 1621 cacatttcat tgccttagca gtgtatgtat atgcattatt ttttccttat ttgcccttag 1681 cttgcagatt tcatagcagc taatatatat ccgtcggaat tatttgaac //