LOCUS AK105913 1657 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:001-204-H06, full insert sequence. ACCESSION AK105913 VERSION AK105913.1 KEYWORDS oligo capping; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 1657) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..1657 /clone="001-204-H06" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" CDS 43..1542 /db_xref="Osa1:LOC_Os02g36110" /db_xref="RAP-DB:Os02g0569900" /note="(RAP Annotation release2) Cytochrome P450 family protein" /note="(Rice Genome Annotation Project) cytochrome P450 76C2, putative, expressed" /note="mapping to R02-TIGRv4S1-000864F (Chr.2: short arm=21734434, long arm=21736092, direction=forward) for TIGR Pseudomol ver4" /protein_id="BAG97435.1" /translation="MENSQVWLLWGALSVAVLFYLSTLRRRYAGGKPLPPGPTPLPLI GNLHLAGGTFHHKLRDLARVHGPVMTLKLGLATNVVISSREAAIEAYTKYDRHLAARA TPDTFRACGFADRSMVFIPSSDPQWKALRGIQGSHVFTPRGLAAVRPIRERKVGDLIA YLRAHAGEEVLLGQAMYTGLLNLVSFSYFSIDIVDMGSQMARDLREVVDDIISVVGKP NISDFYPFLRPLDLQGLRRWTTKRFNRVFSIMGDIIDRRLAHIRDGKPRHDDFLDSLL ELMATGKMERVNVVNMLFEAFVAGVDTMALTLEWVMAELLHNPAIMARVRAELSDVLG GKEAVEEADAARLPYLQAVLKEAMRLHPVGALLLPHFAAEDGVEIGGYAVPRGSTVLF NAWAIMRDPAAWERPDEFVPERFLGRSPPLDFRGKDVEFMPFGSGRRLCPGLPLAERV VPFILASMLHTFEWKLPGGMTAEDVDVSEKFKSANVLAVPLKAVPVLIK" BASE COUNT 281 a 555 c 527 g 294 t ORIGIN 1 aggtagaacc agagaaaaag aacattaacg ataagtaaag taatggagaa tagccaggtg 61 tggctgctat ggggagctct ctccgtcgct gtcctcttct acctctccac cctgcgacga 121 cgctacgccg gcggcaaacc cctccccccg ggcccgacgc cactgccgct catcggcaac 181 ctccacctgg ccggcggcac gttccaccac aagctcaggg acctggcgcg cgtccacggc 241 cccgtgatga cgctcaagct cggcctcgcc accaacgtgg tcatctcctc ccgggaggcc 301 gccatcgagg cgtacaccaa gtacgaccgc cacctcgccg cgcgcgccac tccggacacc 361 ttccgcgcgt gcggcttcgc cgaccgctcc atggtgttca tcccgagctc cgacccgcag 421 tggaaggccc tgcgcgggat ccagggctcc cacgtcttca ccccgcgtgg ccttgccgcc 481 gtgcgcccca tccgtgagcg gaaggtgggc gacctcatcg cctacctccg cgcgcacgcc 541 ggcgaggagg tgctcctcgg ccaggccatg tacactggcc tcctcaacct cgtgtccttc 601 tcctacttct ccatcgacat cgtcgacatg ggctcgcaga tggcccgcga cctgcgggag 661 gtggtggacg acatcatctc ggtggtcggg aagcccaaca tctccgactt ctacccgttc 721 ctccggccgc tggacctgca gggcctgcgc cgctggacga cgaagcggtt caacagggtg 781 ttctccatca tgggcgacat catcgaccgc cgcctggctc acatccgcga cggcaagccg 841 aggcacgacg acttcctcga ctcgctcctc gagctcatgg ccaccggcaa gatggagcgt 901 gtcaacgtgg tgaacatgct gttcgaggcc ttcgtcgccg gcgtggacac catggccctc 961 accctggagt gggtgatggc cgagctgctc cacaacccgg ccatcatggc gagggtgcgc 1021 gcggagctga gcgacgtgct cggcgggaag gaggccgtgg aggaggccga cgcggcgagg 1081 ctgccctacc tccaggccgt gctgaaggag gccatgaggc tgcacccggt gggcgcgctg 1141 ctgctgccgc acttcgccgc ggaggacggc gtggagatcg gcggctacgc ggtgccgagg 1201 ggctccacgg tgctcttcaa cgcgtgggcg atcatgcgcg acccggcggc gtgggagagg 1261 cccgacgagt tcgtgccgga gcgcttcctg gggaggtcac ccccgctgga cttcaggggg 1321 aaggacgtgg agttcatgcc gttcgggtcc gggaggcggc tgtgccccgg gctgccgctg 1381 gcggagcgcg tcgtgccgtt catcctggcg tcgatgctgc acacgttcga gtggaagctc 1441 cccggcggca tgacggcgga ggacgtggac gtgtccgaga agttcaagtc tgccaatgtg 1501 cttgccgtgc ctctcaaggc cgtgcctgtc ctgatcaaat agtcggacgt acgactatat 1561 tgttagccag gtcattaatt gttccagagt actttggttt cactatatat atacgggacc 1621 cagtggcacg agaataatat gcatatgcat atatatg //