LOCUS AK105488 1535 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:001-127-B10, full insert sequence. ACCESSION AK105488 VERSION AK105488.1 KEYWORDS oligo capping; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 1535) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..1535 /clone="001-127-B10" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" CDS 63..1157 /db_xref="Osa1:LOC_Os01g45760" /db_xref="RAP-DB:Os01g0645400" /note="(RAP Annotation release2) Similar to Dimethylaniline monooxygenase-like protein (Flavin-containing monooxygenase YUCCA)" /note="(Rice Genome Annotation Project) disulfide oxidoreductase/ monooxygenase/ oxidoreductase, putative, expressed" /note="mapping to R01-TIGRv4S1-001087F (Chr.1: short arm=26321516, long arm=26323684, direction=forward) for TIGR Pseudomol ver4" /protein_id="BAG97267.1" /translation="MDNKPAQERRETWVPGAVIVGAGPSGLAAAACLAARGVPATVLE RSDSLASTWRHRMYDRLALHLPKRFCELPLLPFPEEYPTYPSKDQFVAYMEAYAAAAG VAPRFGATVEEAAFDAAVGAWRVRLDGGEVLMARWLVVATGENAEPRVPDFPGMQKFA GCAMHTSEYKSGEQFAGKKVLVVGCGNSGMEVSLDLCRHGAKPSMVVRNTVHVLPREM FGLSTFGIAMALLRWLPVQLVDRFLLTAAHLILGNTGQFGLRRPKTGPIELKNLTGRT PVLDVGTLDHIKSGKIKVVGAVKEMTRQGVRFTDGKEEQFDTIILATGYRSNVPSWLK VKQSVTHSCSFYFSFCPHCTILLLVIYISR" BASE COUNT 311 a 430 c 469 g 325 t ORIGIN 1 acctagttgg cagtaaaaaa agcgccgcta cctacacaca caaccgctct gcacaagggg 61 ccatggacaa caagccggcg caagaacgcc gcgagacgtg ggtcccgggc gccgtcatcg 121 tcggcgcggg cccgtcgggg ctcgccgcgg cggcgtgcct cgcggcgcgg ggcgttccgg 181 cgacggtgct tgagcggtcc gactcgctgg cgtccacgtg gcgccaccgc atgtacgacc 241 gcctcgctct ccacctgccc aagcgcttct gcgagctgcc gctcctcccg ttcccggagg 301 agtacccgac gtacccgtcc aaggaccagt tcgtggcgta catggaggcg tacgccgcgg 361 cggcgggcgt cgcgccgcgc ttcggcgcca ccgtcgagga ggccgcgttc gacgcggccg 421 tcggcgcatg gagggtgcgt ctcgacggcg gggaggtgct catggcgcgg tggctcgtcg 481 tcgcgacggg ggagaacgcc gagccgcggg tgccggactt tcccggcatg cagaagttcg 541 ccgggtgtgc catgcatact tccgagtaca agtccggcga gcagtttgcc ggtaagaagg 601 tgttggtcgt gggatgcggg aattctggca tggaagtgag cttggatttg tgccggcatg 661 gcgcgaagcc ctccatggtg gtgcgcaaca cggtgcatgt cctaccaagg gaaatgttcg 721 gtctatccac gttcggcatc gccatggcgc tgctgcgatg gctaccggtt cagctcgtcg 781 accggttcct tctcacggcg gctcacctca tcctcggtaa cacggggcag ttcggcctaa 841 ggcggcccaa aacagggccc atcgagctca agaacctcac cggcaggaca cccgtactgg 901 acgttgggac gctagaccac atcaaatccg gcaaaattaa ggtagtggga gcagtgaagg 961 agatgacgag gcaaggggtc aggttcacgg atggcaagga ggagcaattc gacacaataa 1021 tcctcgccac aggctacagg agcaacgtgc catcttggct caaggtaaag cagagtgtga 1081 ctcactcttg ttcgttttat ttttctttct gtccgcactg cactatacta ctactagtga 1141 tatatatctc gagatgatac ggattatatg gtcaactgtc aagcccaagg atgttaatta 1201 tatgtctata tgtacgtgtg ctttatgtgt tgtaggatgc cggtgtcttg ttcacgaggg 1261 agggcatttc caaggtcccc ttccctaaca gctggagagg gcggaatggt ctctacaccg 1321 tcggattcac tcagcggggg ctcctcggca cgtcatcgga cgccctcaac gtcgccaaag 1381 acatacattg ccaatggaga gaaagggacc gatctgctat taatgtactt gaaataagca 1441 actcttcctt ttgatttgac tggaaatgta cagtgttttg attaggaata ttgtattgtg 1501 tgcatataac accatgttct atctcccttt tcaac //