LOCUS       AK105488                1535 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:001-127-B10, full insert
            sequence.
ACCESSION   AK105488
VERSION     AK105488.1
KEYWORDS    oligo capping; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 1535)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..1535
                     /clone="001-127-B10"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     CDS             63..1157
                     /db_xref="Osa1:LOC_Os01g45760"
                     /db_xref="RAP-DB:Os01g0645400"
                     /note="(RAP Annotation release2) Similar to
                     Dimethylaniline monooxygenase-like protein
                     (Flavin-containing monooxygenase YUCCA)"
                     /note="(Rice Genome Annotation Project) disulfide
                     oxidoreductase/ monooxygenase/ oxidoreductase, putative,
                     expressed"
                     /note="mapping to R01-TIGRv4S1-001087F (Chr.1: short
                     arm=26321516, long arm=26323684, direction=forward) for
                     TIGR Pseudomol ver4"
                     /protein_id="BAG97267.1"
                     /translation="MDNKPAQERRETWVPGAVIVGAGPSGLAAAACLAARGVPATVLE
                     RSDSLASTWRHRMYDRLALHLPKRFCELPLLPFPEEYPTYPSKDQFVAYMEAYAAAAG
                     VAPRFGATVEEAAFDAAVGAWRVRLDGGEVLMARWLVVATGENAEPRVPDFPGMQKFA
                     GCAMHTSEYKSGEQFAGKKVLVVGCGNSGMEVSLDLCRHGAKPSMVVRNTVHVLPREM
                     FGLSTFGIAMALLRWLPVQLVDRFLLTAAHLILGNTGQFGLRRPKTGPIELKNLTGRT
                     PVLDVGTLDHIKSGKIKVVGAVKEMTRQGVRFTDGKEEQFDTIILATGYRSNVPSWLK
                     VKQSVTHSCSFYFSFCPHCTILLLVIYISR"
BASE COUNT          311 a          430 c          469 g          325 t
ORIGIN      
        1 acctagttgg cagtaaaaaa agcgccgcta cctacacaca caaccgctct gcacaagggg
       61 ccatggacaa caagccggcg caagaacgcc gcgagacgtg ggtcccgggc gccgtcatcg
      121 tcggcgcggg cccgtcgggg ctcgccgcgg cggcgtgcct cgcggcgcgg ggcgttccgg
      181 cgacggtgct tgagcggtcc gactcgctgg cgtccacgtg gcgccaccgc atgtacgacc
      241 gcctcgctct ccacctgccc aagcgcttct gcgagctgcc gctcctcccg ttcccggagg
      301 agtacccgac gtacccgtcc aaggaccagt tcgtggcgta catggaggcg tacgccgcgg
      361 cggcgggcgt cgcgccgcgc ttcggcgcca ccgtcgagga ggccgcgttc gacgcggccg
      421 tcggcgcatg gagggtgcgt ctcgacggcg gggaggtgct catggcgcgg tggctcgtcg
      481 tcgcgacggg ggagaacgcc gagccgcggg tgccggactt tcccggcatg cagaagttcg
      541 ccgggtgtgc catgcatact tccgagtaca agtccggcga gcagtttgcc ggtaagaagg
      601 tgttggtcgt gggatgcggg aattctggca tggaagtgag cttggatttg tgccggcatg
      661 gcgcgaagcc ctccatggtg gtgcgcaaca cggtgcatgt cctaccaagg gaaatgttcg
      721 gtctatccac gttcggcatc gccatggcgc tgctgcgatg gctaccggtt cagctcgtcg
      781 accggttcct tctcacggcg gctcacctca tcctcggtaa cacggggcag ttcggcctaa
      841 ggcggcccaa aacagggccc atcgagctca agaacctcac cggcaggaca cccgtactgg
      901 acgttgggac gctagaccac atcaaatccg gcaaaattaa ggtagtggga gcagtgaagg
      961 agatgacgag gcaaggggtc aggttcacgg atggcaagga ggagcaattc gacacaataa
     1021 tcctcgccac aggctacagg agcaacgtgc catcttggct caaggtaaag cagagtgtga
     1081 ctcactcttg ttcgttttat ttttctttct gtccgcactg cactatacta ctactagtga
     1141 tatatatctc gagatgatac ggattatatg gtcaactgtc aagcccaagg atgttaatta
     1201 tatgtctata tgtacgtgtg ctttatgtgt tgtaggatgc cggtgtcttg ttcacgaggg
     1261 agggcatttc caaggtcccc ttccctaaca gctggagagg gcggaatggt ctctacaccg
     1321 tcggattcac tcagcggggg ctcctcggca cgtcatcgga cgccctcaac gtcgccaaag
     1381 acatacattg ccaatggaga gaaagggacc gatctgctat taatgtactt gaaataagca
     1441 actcttcctt ttgatttgac tggaaatgta cagtgttttg attaggaata ttgtattgtg
     1501 tgcatataac accatgttct atctcccttt tcaac
//