LOCUS AK104957 1489 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:001-114-B05, full insert sequence. ACCESSION AK104957 VERSION AK104957.1 KEYWORDS oligo capping; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 1489) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..1489 /clone="001-114-B05" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..1489 /db_xref="Osa1:LOC_Os11g29840" /note="(Rice Genome Annotation Project) expressed protein" /note="mapping to R11-TIGRv4S1-000513F (Chr.11: short arm=16816632, long arm=16821680, direction=forward) for TIGR Pseudomol ver4" BASE COUNT 301 a 429 c 497 g 262 t ORIGIN 1 gtgttcaaag agttcaacac cggaggaggt ggggcctgca actgcatcac cgggcttgcc 61 tcgcctgacc acgacaacga ctacttctcc ggcgacgacg ccgcccacgc ctcgccgccg 121 gtcaccgccg gcgacctctt caccttcggc ggcagcggcc ttctcaccat cggcacgcta 181 ggcatcgccg ccgtcgccat tcccagcggc ggcgacgacg acgactacga catcgacttc 241 gaggtggacg ccaccagcga cgacgacggc ggcttcaccg tcgaggacga cgacgccgac 301 gtcggcggcg ccgtcacgcc caccttcacc ttccccgcgg cgacggcggc ggaggcggtc 361 gtcgccaccg tggagaaggc agtggccgcg gtggaggcga tcgcggagaa ggacgacgac 421 accaccacgg aggacgacct gatggtggtg agcgccgagc tggagaaggt gctcggcggc 481 gtcgacgtgg cgtcggcgcg ggtgagcttc gccatgggcg gtggcgtcga ctgcccgctc 541 cagggcttcc tgttcggctc cccggtgagc gacgtcgagt cgcgcccgga gtacctgcag 601 gcgccgcggg actcgtccgg ctcctgcggc ggcggcgggc ggcgcacctc gctcggcgag 661 ctgttcatgc gcacccgctt cgccgacgag aaggtggcgc tcgtcgccgt cgccgagggc 721 gaggacggcg tcgccggcga cgacggcgct gctgctgccg gcgtcggcgg agacagagcg 781 gggaaaggcg gcggctacaa gacgatgaag aagaggaagg tgaaggacga gaaaggcggc 841 ggcggcgccg ccggcggtgg aatgccggcg acggtgacga agggcaagtt tcagaagatc 901 cttcaaatct tccacaggaa agtctacccc gagaacacac tcctcacaag gaatctgacc 961 aagaagagcc gcaaccgcgg cgccaccgat aatggcggtg gcgccgtggc caccggagac 1021 cccgacgggc ctctggcctc gccggtgctc cggtgccgga aggaccatcc catgaggggc 1081 ttcggctgct gcaccaatgg cgccttcggt gcatcgtcac cgggaggcaa cgccgagatg 1141 aacggcaaca agagcggcca ctggatcaag actgatgccg actacttggt gctggaatta 1201 taatggggaa aagaagagga gctatttgtt tcatcaagaa ttaaagcttg aatagtgagc 1261 atctcatata tatgaatatg tgcttgctgt tacaatataa tctctatctg tttggtatag 1321 aagggcttga atgtgctgta tatgtcacta tatattgggg gggagaggat tactatgaga 1381 tcaactcata agtgtgtggt gtttatatac attgctctgt gaatgtatga cagagatcag 1441 aacttaatgt attgtatgct ttcttgatgt gattggtgtt tatgagcct //