LOCUS AK103067 1520 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J033117P12, full insert sequence. ACCESSION AK103067 VERSION AK103067.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 1520) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..1520 /clone="J033117P12" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..1520 /db_xref="Osa1:LOC_Os06g11290" /note="(Rice Genome Annotation Project) 12-oxophytodienoate reductase 2, putative, expressed" /note="mapping to R06-TIGRv4S1-000315R (Chr.6: short arm=5917167, long arm=5918686, direction=reverse) for TIGR Pseudomol ver4" BASE COUNT 362 a 413 c 422 g 323 t ORIGIN 1 gagagcaaca aagaacagag cagagcagag cagcagcagc aagaaacaga gagagaagca 61 gagcaatttc gatcgagaag aaccaaagct actcctaagc caaagatggt gcacgcaccg 121 gcgaaagtgg cagctgcggc ggcgatcccg ctgctgacgc cgtacaagat ggggcagctg 181 gagctctccc accgtgtggt gctcgcgccg ctcacgcggt gccgctccta cggcaacgtg 241 ccgcagccgc acgcggcggt gtactactcg cagcgggcga ccaggggcgg cctcctcatc 301 gcggaggcca ccgacatctc ccccaccgcg cagggctacc cggagacccc cggcatctac 361 acgcagcagc agatcgaggc gtggaagccc atcgtcgacg ccgtccaccg caagggcgcc 421 ctcttcttcc tgcagatatg gcacgtcggc agggtctcca ccacaggttc gtccatctgc 481 cagattattt acttgctagt tgttactact tggttactga ttgattcgaa gaatcaaagg 541 tcattgtgct ctttgattga ttaaatttcc aaatgaaatc gacagatttc cagccgaatg 601 gacaggcgcc gatctcaagc accgacaagc agatcacacc ggacgattca ggcatggtgt 661 actccaagcc ccggcggctc cggacggatg agatccctca gatcatcgac gacttcaggc 721 gagccgcgcg gaacgccatc gaggcggggt tcgacggcgt ggagattcat ggcgcgcacg 781 gctacctcct ggagcagttc atgaaggaca gcgccaacga ccgcaccgac gagtacggtg 841 gcagcctcga gaaccggtgc cgcttcgccg tcgaggtgat cgacgccgtc gtcgccgagg 901 tgggagctca ccgtgtcgga atcagattat cgccgttcgt cgacttcatg gactgcttcg 961 actccgaccc ggtggctctc ggctcataca tggtgcagca actcaacaag cacccagggt 1021 ttctctactg ccacatggtg gagccaagaa tggccataat cgaaggacga aggaagatcg 1081 cccatggcct cctaccattc aggaagcagt tcaatggcac tttcatcgct gctggcgggt 1141 atgaccggga ggaagggaac aaggtggtgg ctgatggcta tgccgatctc gtcgcctatg 1201 ggaggctctt cttggctaac cctgacttgc cgaggaggtt tgagcttgac gcaccattga 1261 acaggtatga caggtctacc ttttatacac aggatcccgt tgttggctat acagattacc 1321 cttttcttga ggagattgat gaggagtcaa gaactactta tgcttaattg tcacctaaat 1381 aatccaattt tagcctatta tttggattaa taatgtaaca cttatcatgt gatacggaca 1441 agcatgaata catttttttg ttgtaagttt gtagctgttg attcgagatt aatgagctaa 1501 tgtaatattg atattgttcg //