LOCUS AK102791 2101 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J033107P14, full insert sequence. ACCESSION AK102791 VERSION AK102791.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 2101) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..2101 /clone="J033107P14" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..2101 /db_xref="Osa1:LOC_Os01g68630" /db_xref="Osa1:LOC_Os01g68640" /db_xref="RAP-DB:Os01g0914800" /note="(RAP Annotation release2) Protein of unknown function DUF231, plant domain containing protein" /note="(Rice Genome Annotation Project) expressed protein" /note="mapping to R01-TIGRv4S1-001874F (Chr.1: short arm=40184688, long arm=40188132, direction=forward) for TIGR Pseudomol ver4" BASE COUNT 522 a 461 c 553 g 565 t ORIGIN 1 gctagcagtt cttccttccg ttccttccct ctatctatcc tccgcctcgt cctcgccacg 61 cgcgaaggcg gcgtcgatcg gttcccccat ttttctcatc gatccctcgt ggcctcctcc 121 ccgccgccgc gccacctcgt ctcgaagatt tctttgatgc gtggtggcag tggcgtttgg 181 atcttggtgc cgccatgagt ccgccgggga ggaaggcccc ggccggtgcg ggcgggatcc 241 gtcggtggct ctccaccgtc gtcgtgtcgg tggtggctct tgtgctaacc ctagtagtga 301 tatcgctatc ggtgggctcg tctctgaccg gggcatcgct acacgagtac ctctttgtca 361 gacctagtga ttcatccaag cttactgatg ggaacatgaa tggtactgcc gttggtgttc 421 cattacaaga ggaagtgttg cagggtggca aggaagtacc cgtggagcac ggtgttcaga 481 gtggcggcgt gaattcgagc gagacgggtg aaatcgatac caaagtacaa gatccagttg 541 ttaccgatga taccgcgtca gtgcctgatg agagaaatct ccctgtctca tcggattcat 601 ccgacaatct tcagaagact aatgaaggta gctgtgatct ataccatgga cattgggttt 661 ttgattcttc tggaccacta tacacaaaca actcttgccc gatcatcacg cagatgcaga 721 attgtcaagg aaatggtcga cctgataagg attatgaaaa ttatagatgg aaaccagaac 781 agtgcatcct accacgcttt gatggaccaa agttcctgga gttgatgaga ggcaagacaa 841 ttgcatttgt tggtgattca gttgccagaa atcagatgga atccctcctc tgcattctgt 901 ggcaggtaga ggccccagta aaccgtggta gccgcaggat gagcaagtgg atttttaggt 961 caacctcaac aattatcgtc cgcatctggt cgtcttggtt agtgcacagg tcaactgaag 1021 ctgtggggtt tgctcctaag ggtatcgata aggttttcct ggatatcccg gatgagacct 1081 ttatggaatt tatcccacgt tttgatgtgc ttgtcctctc ctctgggcac tggtttgcca 1141 aacggtctgc ttatatcctg aatggcaatg ttgttggagg gcagctctgg tggcctcgta 1201 aagctggaaa tatgcagatc aacaatgttg atgcttttgg tacatctgtt gagacatgcc 1261 taactgctct agctaccaat ccaaatttca caggtatagc tatcgtgcgc acatattcac 1321 cagatcatta tgaaggtggg gcttggaata ccggtggatc atgcactgga aagactaagc 1381 ccttggatgt ggtggtgagg aatggattca cggacaccat gtatggaaag caggtttcag 1441 ggttcacaaa agcagtgcag aattctggga aacatggttc caggttgaaa ttgatggaca 1501 tcactgagcc ctttgccctg aggcctgatg ggcatcctgg tccatataga agtactgacc 1561 caaacaagaa gacgcaaaga ggtccagatg gaaggcctcc acctcaggat tgcctacatt 1621 ggtgcatgcc aggacctgta gatacatgga atgagatgtt gctagagacc atacgaagag 1681 agttcgaggg agtgagaagc tgaagaaaaa cactcattgg ctgcttgatt tctatcatgt 1741 gatacgacct gcaaaaacta attaagcttc tagcattggt gtatacctca ttacatatcg 1801 tgttgttgtt ctcccacaga taggaaggaa atatagcttt tggttggaca aaaaaacaaa 1861 ttgtaggcat gttgtcaaca gtcgggatag aagtacagag gggtagacag ttagagagag 1921 aggttatgat ggatgatact gtgcaattga tctgtatcta gttttttgtc tgacacattc 1981 ttggagatat gatccgttga cgaattttgt ggaactacat atgatctcat atctcgagca 2041 cctgtcaatc tatgaggcag atgctgattt tggtttataa cagatgaaag agaacttgtt 2101 c //