LOCUS       AK102791                2101 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J033107P14, full insert
            sequence.
ACCESSION   AK102791
VERSION     AK102791.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 2101)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..2101
                     /clone="J033107P14"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..2101
                     /db_xref="Osa1:LOC_Os01g68630"
                     /db_xref="Osa1:LOC_Os01g68640"
                     /db_xref="RAP-DB:Os01g0914800"
                     /note="(RAP Annotation release2) Protein of unknown
                     function DUF231, plant domain containing protein"
                     /note="(Rice Genome Annotation Project) expressed protein"
                     /note="mapping to R01-TIGRv4S1-001874F (Chr.1: short
                     arm=40184688, long arm=40188132, direction=forward) for
                     TIGR Pseudomol ver4"
BASE COUNT          522 a          461 c          553 g          565 t
ORIGIN      
        1 gctagcagtt cttccttccg ttccttccct ctatctatcc tccgcctcgt cctcgccacg
       61 cgcgaaggcg gcgtcgatcg gttcccccat ttttctcatc gatccctcgt ggcctcctcc
      121 ccgccgccgc gccacctcgt ctcgaagatt tctttgatgc gtggtggcag tggcgtttgg
      181 atcttggtgc cgccatgagt ccgccgggga ggaaggcccc ggccggtgcg ggcgggatcc
      241 gtcggtggct ctccaccgtc gtcgtgtcgg tggtggctct tgtgctaacc ctagtagtga
      301 tatcgctatc ggtgggctcg tctctgaccg gggcatcgct acacgagtac ctctttgtca
      361 gacctagtga ttcatccaag cttactgatg ggaacatgaa tggtactgcc gttggtgttc
      421 cattacaaga ggaagtgttg cagggtggca aggaagtacc cgtggagcac ggtgttcaga
      481 gtggcggcgt gaattcgagc gagacgggtg aaatcgatac caaagtacaa gatccagttg
      541 ttaccgatga taccgcgtca gtgcctgatg agagaaatct ccctgtctca tcggattcat
      601 ccgacaatct tcagaagact aatgaaggta gctgtgatct ataccatgga cattgggttt
      661 ttgattcttc tggaccacta tacacaaaca actcttgccc gatcatcacg cagatgcaga
      721 attgtcaagg aaatggtcga cctgataagg attatgaaaa ttatagatgg aaaccagaac
      781 agtgcatcct accacgcttt gatggaccaa agttcctgga gttgatgaga ggcaagacaa
      841 ttgcatttgt tggtgattca gttgccagaa atcagatgga atccctcctc tgcattctgt
      901 ggcaggtaga ggccccagta aaccgtggta gccgcaggat gagcaagtgg atttttaggt
      961 caacctcaac aattatcgtc cgcatctggt cgtcttggtt agtgcacagg tcaactgaag
     1021 ctgtggggtt tgctcctaag ggtatcgata aggttttcct ggatatcccg gatgagacct
     1081 ttatggaatt tatcccacgt tttgatgtgc ttgtcctctc ctctgggcac tggtttgcca
     1141 aacggtctgc ttatatcctg aatggcaatg ttgttggagg gcagctctgg tggcctcgta
     1201 aagctggaaa tatgcagatc aacaatgttg atgcttttgg tacatctgtt gagacatgcc
     1261 taactgctct agctaccaat ccaaatttca caggtatagc tatcgtgcgc acatattcac
     1321 cagatcatta tgaaggtggg gcttggaata ccggtggatc atgcactgga aagactaagc
     1381 ccttggatgt ggtggtgagg aatggattca cggacaccat gtatggaaag caggtttcag
     1441 ggttcacaaa agcagtgcag aattctggga aacatggttc caggttgaaa ttgatggaca
     1501 tcactgagcc ctttgccctg aggcctgatg ggcatcctgg tccatataga agtactgacc
     1561 caaacaagaa gacgcaaaga ggtccagatg gaaggcctcc acctcaggat tgcctacatt
     1621 ggtgcatgcc aggacctgta gatacatgga atgagatgtt gctagagacc atacgaagag
     1681 agttcgaggg agtgagaagc tgaagaaaaa cactcattgg ctgcttgatt tctatcatgt
     1741 gatacgacct gcaaaaacta attaagcttc tagcattggt gtatacctca ttacatatcg
     1801 tgttgttgtt ctcccacaga taggaaggaa atatagcttt tggttggaca aaaaaacaaa
     1861 ttgtaggcat gttgtcaaca gtcgggatag aagtacagag gggtagacag ttagagagag
     1921 aggttatgat ggatgatact gtgcaattga tctgtatcta gttttttgtc tgacacattc
     1981 ttggagatat gatccgttga cgaattttgt ggaactacat atgatctcat atctcgagca
     2041 cctgtcaatc tatgaggcag atgctgattt tggtttataa cagatgaaag agaacttgtt
     2101 c
//