LOCUS       AK102596                3859 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J033098J19, full insert
            sequence.
ACCESSION   AK102596
VERSION     AK102596.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 3859)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..3859
                     /clone="J033098J19"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     CDS             428..3454
                     /db_xref="Osa1:LOC_Os01g27740"
                     /db_xref="RAP-DB:Os01g0375100"
                     /note="(RAP Annotation release2) Similar to DnAJ-like
                     protein slr0093"
                     /note="(Rice Genome Annotation Project) dnaJ domain
                     containing protein, expressed"
                     /note="mapping to R01-TIGRv4S1-000723R (Chr.1: short
                     arm=15801149, long arm=15805188, direction=reverse) for
                     TIGR Pseudomol ver4"
                     /protein_id="BAG95629.1"
                     /translation="MMECNKEEALKARDIAAKKMESKDFVGAKRIALKAQRIFPELEN
                     ISQMLTVCEVHCAAEAKMNGLLDFYGVLQVDVMADEATIKKQFRKLAFSLHPDKNGFA
                     GAEAAFKLVAEAQSTLSDRTKRRAYDIKWRIASKQATQPKQGAQPAQAAQPKQCTQPP
                     LATKRNQSAQPTHNTQQSAQPKQSTQPMQATQPKHATEPMEKTDANRASNAKEGYGSS
                     VRPPSAGEAFWTMCVNCKTKYQYYSNVLNHKLRCQNCKKDFRAVMLNEQDVPSVFSSS
                     AAKSAGQHCDVPKQEDCSTKFSSAANRDAKPMVNGGQHDEQMKNSASVRAGGEGTVNH
                     TESIRKGGLEFSTLHVSSAANVGSKAGGKMTSCPTPDVAGRQNPGNRVNTSAETGVMN
                     IPNPRRSARRKENADASIIQDTPSKKRRTILDWFSNPDSSRKKVADDNVVRADGQACE
                     PHVSSEAHNHQKGTTSNEGNQEKRKDVAHDTNAQKKSGIPGNFSYPDPEFFDFDRCRD
                     VSMFAVDQIWALYDDRDGMPRYYARIRRIDTTNFRVQFTWLEHDAKNEEEDKWTDEEL
                     PVACGNFFLGKTVVSQDALMFSHIVSWVKGRKRSSYEIYPRKGEVWALYKGWSMQWSS
                     DADKHRAYEYEAVEILSNFTVEAGAAVGPLVKIKGFVSLFAKVKEKPSFVIPPSEMLR
                     FSHSIPFFRTKGDEKVGVAGGFLELDTASLPSNLDVAFPSVTLDSCMPVCKTMNSGFN
                     DFTGYEQGALKENLMNEGKRKDHSLERTPVHQQSAAYSSPSTFDYPNSEFHNFEEYRS
                     YSKFERGQIWALYSDLDQFPKYYGWVTKVDTDPFRVHLTWLEVCPQLEQENMWLEQNI
                     PVSCGTFKIRNWRIKLDTNDAFSHLVETSQVGWKRYFEIHPQVGEIWAIYNNWAPGWV
                     PSSKDTFEYTIGEITDCTEASTKVLLLTRVDGYRAVFKPDSVRGTLEIPTNENIRFSH
                     LIPSFRLTKENGGKLCGFYELDPASVPDTFLFRSGR"
BASE COUNT         1118 a          797 c          944 g         1000 t
ORIGIN      
        1 gggcctcggc ctcccgtctc ctcggctcct cgcccacttc gtccgccgcc tgcgctgcgc
       61 cgagacgccg ccgatcccca tcccgcgagc ggcggggccg gcctccatcc cgtgaccgcg
      121 agcaggagcg ccggcgcggg gcacgtgctg ctgcttccac caatatcatc gccggtgagg
      181 gcacccgatc tggaagcctt tttctctttg ccctaaccaa tagaagttcg tttccaaatc
      241 aagattttgg gggttcaagt aaacccccat gcccaacgta agaacttgtt aagccatagg
      301 ctctggttcc atatgagaga agatccatat gctcttttga gatagtttgg aaaatggcat
      361 caaagaaagt ataagtgggt tatgtcaaga aggcctgtga ttttctagaa tcaatttggt
      421 gagccgaatg atggagtgca acaaagaaga ggccctcaag gccagggata ttgctgcaaa
      481 gaagatggaa agcaaagact ttgttggtgc caaaaggatc gcgcttaaag ctcaaaggat
      541 ttttccagag cttgagaaca tatcccagat gttaactgtc tgtgaagtac attgtgcggc
      601 agaagcaaag atgaatggac tattggactt ctatggagtt ctccaagtgg atgtaatggc
      661 ggatgaagca accattaaaa agcaattccg caagcttgct ttttcgcttc accctgataa
      721 aaacggtttc gctggcgctg aagctgcttt caaattagtt gcagaagctc agtcaacatt
      781 gtctgatcga acaaaacggc gtgcatatga catcaaatgg agaattgcat caaagcaggc
      841 tacgcaacca aagcagggtg cccaaccagc gcaggctgcc caaccaaaac agtgtacaca
      901 accaccgctg gctacaaaac gaaatcagag tgcacaacca acgcataata cacagcagag
      961 tgcacagcca aagcagagta cacaaccgat gcaggctact caaccgaagc atgctactga
     1021 accaatggag aaaacagatg caaatagagc tagtaatgct aaggaaggat atggatcatc
     1081 agttcgacca cccagtgctg gagaagcatt ctggacaatg tgtgttaact gtaaaactaa
     1141 atatcagtac tactccaatg ttctgaatca taaactccgt tgtcagaact gcaaaaaaga
     1201 ttttcgagca gttatgctaa atgaacagga tgtgccttct gtattctcat caagtgcagc
     1261 caaaagtgca ggacaacatt gtgacgttcc caaacaagag gactgttcta cgaagttctc
     1321 ttctgcagcg aatagagatg caaagcccat ggtgaatgga ggacaacatg atgaacaaat
     1381 gaaaaacagt gccagtgtca gagcaggtgg tgaggggaca gttaaccata cagagtcaat
     1441 cagaaaaggg ggacttgaat tttcaacact gcatgtatct tctgcagcaa atgttggtag
     1501 taaggcaggg ggaaagatga catcgtgccc tactccagat gttgctggta gacaaaaccc
     1561 tggtaatagg gtaaatacat cagcagagac aggtgtgatg aatattccta atccacggag
     1621 atcggctagg aggaaggaaa atgctgatgc cagcatcatc caggatacgc ctagcaaaaa
     1681 gaggcgaacc atattagatt ggttttcaaa tcctgactca agtcgtaaga aagtggctga
     1741 tgataatgtt gtccgtgctg atggacaagc ttgtgaacct catgtctcca gcgaagcaca
     1801 caaccaccag aaaggaacta ctagcaatga aggaaaccag gaaaaaagga aagatgttgc
     1861 acatgataca aatgctcaga agaaatctgg cattcctggg aacttttcct atcctgaccc
     1921 agaatttttt gacttcgata ggtgcaggga tgttagtatg tttgcagttg atcagatctg
     1981 ggcactttat gatgaccgtg atggcatgcc acgatattat gctcgtataa gacgcattga
     2041 tacaaccaac ttcagagttc agttcacttg gctggagcat gatgcaaaga atgaggaaga
     2101 ggacaaatgg actgatgaag aattgcctgt ggcttgtggg aactttttct taggaaaaac
     2161 agtggtgtca caagatgccc tcatgttttc tcatattgtg tcatgggtga aaggtagaaa
     2221 aaggagctca tacgaaatat atcctaggaa gggtgaggta tgggctctat ataagggttg
     2281 gagtatgcag tggagctcag atgcagataa gcatagagcc tatgagtatg aagctgtgga
     2341 gatcttgtca aatttcacag tggaagctgg tgctgctgtt ggccctttgg taaagattaa
     2401 aggttttgtg agtctctttg caaaagtaaa ggagaaacca tcattcgtta taccaccaag
     2461 cgaaatgcta cggttctctc acagtatccc attttttaga acaaagggag atgagaaggt
     2521 aggtgttgct ggtgggtttc ttgaactaga tactgcatca cttcctagta acttggacgt
     2581 agcctttcca tcggttactc ttgattcttg catgcctgtc tgcaagacaa tgaacagtgg
     2641 atttaatgat ttcactggat atgagcaagg tgcgctgaaa gaaaatttga tgaacgaagg
     2701 taaacgtaaa gatcattccc ttgaacgaac cccagtgcat caacagagtg ctgcctattc
     2761 ctcccccagt acttttgatt acccaaactc tgaatttcat aactttgaag aatatcgatc
     2821 atatagtaag tttgaacgtg gccagatatg ggctctttac agtgatcttg atcaatttcc
     2881 aaagtactat ggttgggtga ccaaagttga tacagatccg ttcagagtgc atttgacttg
     2941 gctcgaagtc tgccctcagc tggagcagga gaatatgtgg ttagagcaga atattcctgt
     3001 gagctgtggg acttttaaaa tccgcaactg gaggataaag ttagacacga atgatgcttt
     3061 ctctcattta gtagaaacta gccaagttgg ttggaaacga tactttgaaa ttcatccaca
     3121 agtaggggaa atttgggcca tctacaataa ttgggcacct ggttgggttc cttccagcaa
     3181 ggatactttc gagtacacaa ttggtgaaat tactgactgc actgaagcta gcacaaaagt
     3241 cttacttttg acccgagtag atggctacag agctgtgttc aagcctgaca gtgtaagggg
     3301 cactctggag atacctacaa atgaaaacat aaggttttct cacctgatac cttctttccg
     3361 gctgacaaaa gaaaacggtg gcaaactctg tggcttttat gagctggatc cagcttctgt
     3421 tcctgatact ttcctgttcc ggagcggccg ctgattggca aatgttgatg ctgactgtcc
     3481 tggagatagt aaggatctgg tctcttgtat gctcttctag tagggtgttc atacaccacg
     3541 cagctgtggt gcaaaccaaa ccatgctatc ttttctaatg ttgaggcctc tgtgctcatt
     3601 cagttagtta ttaggttaaa attgcatgtt gcattggcat ttggcatgtg atgcagtgat
     3661 tatctggttg tcaatttctc ttgaggcgtt gccctgagag caaatgggaa atgtcatgca
     3721 tactgcaatt tttctggagc caagcttctt ttctggccag tggtgtcatg ggcctgtgct
     3781 caaagaagta ttgcaacctg taacatatag gttgcttctt gctgtgcttt aatatatttg
     3841 tgccctttca tttggtagg
//