LOCUS AK102556 2777 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J033097G03, full insert sequence. ACCESSION AK102556 VERSION AK102556.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 2777) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..2777 /clone="J033097G03" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..2777 /db_xref="Osa1:LOC_Os10g01060" /db_xref="RAP-DB:Os10g0100500" /note="(RAP Annotation release2) Protein kinase-like domain containing protein" /note="(Rice Genome Annotation Project) ATP binding protein, putative, expressed" /note="mapping to R10-TIGRv4S1-000002F (Chr.10: short arm=51289, long arm=57140, direction=forward) for TIGR Pseudomol ver4" BASE COUNT 763 a 640 c 643 g 731 t ORIGIN 1 gttccatcca tggagatact tagcccgtcg ccgccgccca gccccggccc cgcctccgcc 61 tccgcctccg cctccggctc cgccatggat tccttcatcc acagaggtgc cggctggcat 121 ttcccccgcc gcgacaacgt cgacgcgcgg gtccatgtcg ccgtcgggag gtcgccggag 181 aagacgttgg gcctgctgcg atgggccttc cgccgcttcg cctgcgccca agtcgtcctc 241 gtgcacgtcc accaaccttc tccgctcatc cctaccctct taggcaagat tcctgccgct 301 caagccaccg aagagctcgt gctgtcgcat cgcaaatccg agaaggacga aatgaacaag 361 atcctcctca cctacctcac tttctgtcac agggcacagg ttcaggcaag tcttcttgtc 421 acggagaatg aacaaatcca tgatggtatt atcactttgg tcaaagatca tgggattaca 481 aagcttgtca tgggttctac acctgatact tgcttcaagt tgaaagcgag ctatggcaaa 541 gcatctttta tggcaaggaa tgccccatca ttttgtgaaa tctggtttgt ttggagagga 601 agacacattt ggaccagaga agcagctgca gccattggca acaatatctc agtttacaat 661 gaagatgatg ttatgatcag gaaaagaatc aggttcagct ctactagtaa caatgctgaa 721 tccatacttg atgaaggata catttcatac gaggcacaaa cacctgctga tcgttatgaa 781 atcaccattt cagataatgg tcaaccgaat gattatgaat ctcttgttga tgccaaccat 841 ttctgcaata ttattgtacc aaatttgcaa aatgcacagt ctgcatttaa ctcaacattc 901 cagcctggtt cttctgtaga catggaatca ttagtgttat atcctcagga aatcttggat 961 aaaaatttca agcaggtcat tctagaagca gagagatcaa ggaaggatgc ttttgttgag 1021 cttctcaagc gcaaagatac agagtcaaga gtagccggtg ttattgccag ggcaaaagct 1081 tctgagttcg ctcaaaaaca agaaatgaaa atgcgggagg aacttgaagc tttgttgaca 1141 gccacaaaaa agcagcatga agatcttgca gaaaataaag aaaaggctac agaagggttg 1201 gactcttcga tgagaaaact agccatccta gatgcacgtg ctaaaagcat agcttttcgg 1261 atgaatgaag ctgtggcaga gctgaaattg attcaatctt ccataggaac actcaatcag 1321 gaaattccca aaagagagaa gctagaactt gtacatactg accaggttga aaggtgtgca 1381 tataaccaca ttatgttacc aaattgcagt tcaactgttt gtgctgatga cttgtacaac 1441 tttagagaat tgactttgtc agatattaaa gctgcaacat gcaagttctc agacagctta 1501 aaagtactgc cacgaggtct tggatgtgtt tataaaggag agattatgaa cagaagtgta 1561 atgatttata agttgcactc gtgtatcatt cagagttcga tgcagttcca gcaagaggtc 1621 cacctcatta gcaaggtgag gcaccctcac ctggtgactt tgattggggc atgcccggat 1681 gcattgtgtc ttgactatga atacgtgcca aacgggagcc ttcacgaccg cctttggagc 1741 aagtgcggca ttcctcagtt gccatggaaa atccgtgcac gtattgttgc tgaaatctca 1801 agtgctctat tcttcttgca ttcctgtaaa cctcagatga ttgtccacgg tgacttgaag 1861 cttgaaaaca tccttttaga tgccaacctg cactgcaaga tagctgattg tggtatttct 1921 caattattca tggaagatgc caaggacgca gacccggaat accggagaag caaaccattg 1981 acacccaaat ctgacatata ctcctttggg attgtgatac tccagttact aactgggaag 2041 caggctgcag gccttcccag cgaagtaagg cgtgcaatgt ccagtggaaa gctatggtca 2101 ttgttagatc caacagctgg agagtggcct ctggaggtgg ctcgaaggtt agcagagttg 2161 gggctcaagt gcagtgaggc agcaagtcca gagctgctga ctccagaaac tgtgcgagat 2221 ctggaacagc tccacctgat gagggataat agacaagtgc cctccttctt cctgtgcccg 2281 atcctcaagg aagtgatgca tgatccccag gtgggggcgg acgggttgac gtacgaaggg 2341 cgcgccattt ccgagttgat ggacaatggc cctccaatca cccccaacca cgcccttcgt 2401 tttgccatcc atgactggct ctctcagaga tcaactcctt tctgattttc cccaaggatc 2461 tggattttgt atgtacacat tgtttatttc atagtcagtc tgtttgttag tagcacatgc 2521 atgatgtaac gaaataataa tagagtaaat atttcaagtt tcatgtatcg agcaaatgtc 2581 actgtacata tagagtgagt taggagctat gttcagggca gtcggagtat cttgctagtt 2641 gcccgtttgg tctaagtagc agttgtcatg gggttgacaa actaccccct ccgtttcttt 2701 acttatgtaa gatgctttga tttttttatc agttaaagtt caatcaaatt tatagaaaac 2761 atagttacat ttttaac //