LOCUS       AK102295                2106 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J033089L08, full insert
            sequence.
ACCESSION   AK102295
VERSION     AK102295.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 2106)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..2106
                     /clone="J033089L08"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     CDS             126..1769
                     /db_xref="Osa1:LOC_Os10g05690"
                     /db_xref="RAP-DB:Os10g0147400"
                     /note="(RAP Annotation release2) Similar to Auxin influx
                     carrier protein"
                     /note="(Rice Genome Annotation Project) auxin
                     transporter-like protein 3, putative, expressed"
                     /note="mapping to R10-TIGRv4S1-000093R (Chr.10: short
                     arm=2833767, long arm=2839957, direction=reverse) for
                     TIGR Pseudomol ver4"
                     /protein_id="BAG95486.1"
                     /translation="MASGSSGGGYADEKGPGAATMQALGLQQQHGGGGEVEEESSEMG
                     EKTAARTRLSGLLWHGGSAYDAWFSCASNQVAQVLLTLPYSFAQLGMASGLLFQLFYG
                     LLGSWTAYLISILYLEYRTRKERDKVDFRNHVIQWFEVLDGLLGRHWRNVGLAFNCTF
                     LLFGSVIQLIGCASNIYYINDHLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLM
                     TTYTAWYIAVASLIHGQVEGVAHSGPTSIVLYFTGATNILYTFGGHAVTVEIMHAMWR
                     PQKFKAIYLLATVYVLTLTLPSASAAYWAFGDALLTHSNALALLPRTPWRDAAVVLML
                     IHQFITFGFACTPLYFVWEKLVGLHGCPSLCKRAAARLPVVLPIWFLAIIFPFFGPIN
                     SAVGSLLVSFTVYIIPSLAYMVTFRSPQSRQNAVERPPRFAGGWTGAYVINSFVVAWV
                     LVVGFGFGGWASITNFVHQVDTFGLFAKCYQCPPHPAAAALSPPGAIAPAPASMLPPF
                     NSTAAGIFAAPVPSPAPAPAPMHFVLGHHHHHRHHRHGL"
BASE COUNT          378 a          682 c          601 g          445 t
ORIGIN      
        1 gaacacacca cacacaccca cactggcagc agctcataca catagctagc tcagctgaga
       61 cacacacaca cacagtgagt agttcagctc aaagctagca tcagcagcag agctaattaa
      121 caaacatggc gtccgggagc agcggcggcg gctacgcgga cgagaagggg ccgggggcgg
      181 cgacgatgca ggcgctgggg ctgcagcagc agcacggcgg cggcggagag gtggaagagg
      241 agtcgtcgga gatgggggag aagacggcgg cgaggacgcg gctgtcgggg ctgctgtggc
      301 acggggggtc ggcgtacgac gcgtggttca gctgcgcgtc gaaccaggtg gcgcaggtgc
      361 tgctgacgct gccctactcg ttcgcgcagc tgggcatggc cagcggcctc ctcttccagc
      421 tcttctacgg cctcctcggc agctggaccg cctacctcat cagcatcctc tacctcgagt
      481 accgcacccg caaggagcgc gacaaggtcg acttccgcaa ccacgtcatc cagtggtttg
      541 aggtgctgga tgggctactg gggaggcact ggaggaatgt gggactggcc ttcaactgca
      601 cgtttttgct gttcgggtcg gtgatccaac tgatcgggtg tgccagcaac atctactaca
      661 tcaacgacca tctggacaag cggacatgga cgtacatctt cggcgcctgc tgcgccacca
      721 ccgtcttcat cccgtcattc cacaactacc gcatttggtc cttcctcggc ctcctcatga
      781 ccacctacac cgcctggtac atcgccgtcg cctccctcat ccacggacag gtggagggtg
      841 tggcgcactc tgggcccaca agcatcgtgc tctacttcac gggggccacc aacatcctct
      901 acaccttcgg gggccacgct gtcaccgtgg agataatgca cgcgatgtgg cggccgcaga
      961 agttcaaggc gatctacctg ctggcgacgg tgtacgtgct gacgctgacg ctgccgtcgg
     1021 cgtcggcggc gtactgggcg ttcggggacg cgctgctgac gcactcgaac gcgctggcgc
     1081 tgctgccgcg gacgccgtgg cgcgacgccg cggtggtgct catgctcatc caccagttca
     1141 tcaccttcgg cttcgcctgc accccgctct acttcgtctg ggagaagctc gtcggcctcc
     1201 acggctgccc ctccctctgc aagcgcgccg ccgcccgcct ccccgtcgtc ctccccatct
     1261 ggttcctcgc catcatcttc cccttcttcg gccccatcaa ctccgccgtc ggctccctcc
     1321 tcgtcagctt caccgtctac atcatcccct ccctcgccta catggtcacc ttccgctccc
     1381 cgcaatcccg ccagaacgcg gtggagcggc cgccgaggtt cgccggagga tggacggggg
     1441 cgtacgtgat aaactcgttc gtggtggcgt gggtgctggt ggtcggcttc ggcttcggcg
     1501 ggtgggcgag catcaccaac ttcgtccacc aggtcgacac cttcggcctc ttcgccaagt
     1561 gctaccagtg cccgcctcac cccgccgccg ccgccctctc gccgccgggt gccatcgctc
     1621 cggcgccggc ctcgatgctg ccgccgttca actccaccgc cgccggcatc tttgccgctc
     1681 cggtgccgtc tcctgctccg gctccggcac cgatgcattt cgtccttggt caccaccacc
     1741 atcaccggca ccaccgccac ggcctctagc taattaatcg agatcaatca agatcatgat
     1801 tatcagaggt tgggtttgca ttattgcact agtttttagc gagctactag ctagttgatc
     1861 atcactgcaa gattgttaat tagcgctagt aattagtaaa agtaagcctc ttttcctaat
     1921 cctattgtat gctttgcttc tttcttcttc ttctggttac tgagagagag tgagagtgag
     1981 aatgtttggt ggtggggtat gcatgtcaga gacacgtttc aagtctctcg tcttgtaatg
     2041 tgtccttttt gtgtggagct gcttttgaga aagaaagaag agagatcaaa tttaaaaaaa
     2101 aaatgg
//