LOCUS AK101171 2064 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J033028M11, full insert sequence. ACCESSION AK101171 VERSION AK101171.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 2064) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..2064 /clone="J033028M11" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..2064 /db_xref="Osa1:LOC_Os03g51080" /db_xref="RAP-DB:Os03g0720300" /note="(RAP Annotation release2) Similar to Glutamate decarboxylase isozyme 1 (EC 4.1.1.15)" /note="(Rice Genome Annotation Project) glutamate decarboxylase, putative, expressed" /note="mapping to R03-TIGRv4S1-001361F (Chr.3: short arm=29150782, long arm=29159204, direction=forward) for TIGR Pseudomol ver4" BASE COUNT 438 a 630 c 573 g 423 t ORIGIN 1 gaaggagaga gccttcccgt ctcctttttt tccttccatc caaaaaattc caaatggagt 61 agtagttcac atttttacac cgtcgtcttc gcaaatttaa tactactata cgaaggagga 121 ggaagctctc gcgccgcggt cgctttcctt cccctaaatt aaatcccgtg cgacgcgtag 181 agacctcctc ctccgctttc tcctccaaag cccaagctaa tccccctcct cttcctcgtc 241 gccggcgaga gctcttcgtc ttctccaact cgaccggaag caagcgcgct tccgatccgc 301 catggtgctc tcccacggcg tgtcgggctc cgatgagtcc gtccactcca cgttcgcctc 361 ccgctacgtc cgcacctccc tccccaggtt ccggatgccg gagcagtcga tccccaagga 421 ggcggcgtac cagatcatca acgacgagct gatgctggac ggcaacccgc ggctgaacct 481 cgcgtcgttc gtcaccacgt ggatggagcc cgagtgcgac aagctcatcc aggcctccgt 541 caacaagaac tacgtcgaca tggacgagta ccccgtcacc accgaactcc agaaccgatg 601 tgtgaacatg attgcacacc tcttcaatgc tcctctaggg gactctgaaa cggccgtcgg 661 agtcggcact gtcggctcgt ctgaggccat catgctcgcc ggtttggcct tcaagaggag 721 gtggcagaac aagatgaagg cagccggcaa gccatgcgac aagcctaaca ttgtcaccgg 781 cgccaatgtc caagtttgct gggagaagtt cgcgcgatac ttcgaggttg agctcaagga 841 agtggagctg agtgacggct actacgtcat ggacccagct aaggccgtgg atatggtcga 901 cgagaacacc atctgcgtcg cggcgatcct cgggtcgacg ctgaacgggg agttcgagga 961 cgtgaagctg ctcaacgatc tgctcaccaa gaagaacgct gaaacaggct gggacacgcc 1021 gatccacgtg gacgcggcga gcggcgggtt catcgcgccg ttcctgtacc cggagctgga 1081 gtgggacttc cggctgccgc tggtgaagag catcaacgtg agcgggcaca agtacggcct 1141 cgtctacgcc gggatcgggt ggtgcatctg gaggagcaag gaggatctgc ctgaggagct 1201 catcttccac atcaactacc tcggcgccga ccggcccacc ttcaccctca acttctccaa 1261 gggttccagc caggtcattg cacagtatta ccaactaatc cgcctaggct ttgaggggta 1321 caagaacatc atggagaact gccaggagaa cgcgatggtg ctgaagcagg ggctggagaa 1381 gacggggcgg ttcaacatcg tgtccaagga caacggcgtg ccgctggtgg ccttctccct 1441 caaggacagc gcccggcaca acgagttcga gatctccgac ttcctccgcc gcttcggctg 1501 gatcgtgccg gcctacacca tgccccccga cgcgcagcac gtcaccgtgc tccgcgtcgt 1561 catccgcgag gacttcagcc gcacgctcgc cgagcgcctc gtgctcgacg tcgagaaggt 1621 gctgcacgag ctcgacgcgc tccccgcccg cgtcgtcgcc aacggcggcg acgccgccgc 1681 cgcgtcggcg agcgagaggg agatggagaa gcagcgcgag gtgatctccc tctggaagag 1741 ggccgtgctg ccaagaagaa gaccaacggc gtctgctaaa gcaagtcagc tgcgcagcgg 1801 ggatcgtata ctattattat ggtccacttc gtaattgcga cttcttaatt tttaccgtgt 1861 cgatcggttt accgtctcaa gtctgctctc atccgatttt cggattgatg ctgcttaatt 1921 atgtaccaag ttaattaatt cttagaggac ggaatagttc cgactcaata cgaagcattg 1981 cctgtataag tcgaacacgg gatcatgcat tttacgttgg gtgtgtagca gtgaattgat 2041 cagtgatgct ccatctctac tctg //