LOCUS AK100865 1588 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J023124A15, full insert sequence. ACCESSION AK100865 VERSION AK100865.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 1588) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..1588 /clone="J023124A15" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..1588 /db_xref="Osa1:LOC_Os03g52690" /note="(Rice Genome Annotation Project) CBS domain protein, putative, expressed" /note="mapping to R03-TIGRv4S1-001402R (Chr.3: short arm=30159352, long arm=30160940, direction=reverse) for TIGR Pseudomol ver4" BASE COUNT 369 a 313 c 344 g 562 t ORIGIN 1 gacatcatac caagtgtcct ccttcctcct catcctcccc aaccactgca tccgggtcgg 61 cgtcctcctc ctcctcctcc tcctcgcagg taaagcagca tccaagcatc ctttccaatc 121 catgctcaga gttggaagta gagctgctgc tgatgatggt gtgtggatcg gtgctggttg 181 gtttctcgtt cttgcttgag tgtgagatgt gatgttgatg tgcgtgtgtg tggagtctgg 241 actggaaggt ttcttgagtt cagagtgcag atcagagaat cgtacttttg ctttttacag 301 tgtgttcttg gtttgcccac acgatctgtt catcttttgt ttcttttgtt ttgcctttca 361 tgaacaaacg accacagctc tgcttgcctg ctactgtcct tctcagtttg gcaaatgaaa 421 ggatattttt tttagggaaa gaaagcgaaa attactagtg ctagaaagca gtggcaagtg 481 agaataacac ttctgcttga ttgattaggt taggagttta tagatagttc ttccctcttg 541 gtactgtcag tctgtcactg gtgtgtaagt agagtgacag tgttgatgtt cttccttgag 601 ataaacggcg atatcctttt atcacttcct gagagagcac ggcacgcttt actccctttt 661 attctgtaaa tattgttctc ttccatgggt tacagtttgt gtttcgatac agctttgctt 721 gccatgattt tttttctggc cactttttta gttagagaag ctaaagaact tacttttggt 781 ttcgggttag gcgtgccgta gattcatatg caattcatgg tccgcttgtt tcttttgatt 841 attgagcttg agtgattcgg taacatcaca acagtacacc cacatatcat ggacacatca 901 agtgcgtgta gtttatttag tatttagtgt tttgagtgga gacggcaata gctggattct 961 gtatttggtg gtgactcctt attggttgat tgtgacctaa ataaatatta ttgatttgct 1021 aacgaatgct ggcaaacctt tgcccgtttt ttcgccttgc actttcatga actaaatgat 1081 tcttggaatc taggagtatt aattggacag actcttggat tctactctag atcaataagg 1141 ttgactacat tgatagggga ttccctgtag aatactgtgc atcaaaatga ataccgatta 1201 atagtcaata tgtagacatg accatttcgc tggtcattca acacattttg gtgcgtacat 1261 tgctttgttc tagcagtatt tttgctgacc agtgtacaaa atggtaggct agagctataa 1321 tgctttacat ccttttcatt gcatcagcgc agtggaaatt aacttccact tgacataatg 1381 ctcccaggcc ccatcaggat tggtgtgggg ttgtttattt atgtggaata gtttgagaac 1441 tatattgttt tttaagtaat tccacttgta cagactttct tgttgctttc ttaccagtcc 1501 tttatactga aactgattgt ccggtcattc tagcagtcac ctgcattaca acggaaattg 1561 atttgcaaca actctgtttc ggacaagc //