LOCUS AK100397 2546 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J023086M03, full insert sequence. ACCESSION AK100397 VERSION AK100397.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 2546) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..2546 /clone="J023086M03" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..2546 /db_xref="Osa1:LOC_Os09g25620" /note="(Rice Genome Annotation Project) S-adenosylmethionine decarboxylase proenzyme, putative, expressed" /note="mapping to R09-TIGRv4S1-000409R (Chr.9: short arm=15384721, long arm=15387366, direction=reverse) for TIGR Pseudomol ver4" BASE COUNT 563 a 558 c 578 g 847 t ORIGIN 1 gtgtgtgcgc ccttgttgat tgctcttgtt tctgccaggt ttccttgtta ggctctagtt 61 ttgctcgttg tttactgtaa attcccatgt atattaagtt tgtgcagtgc gctgtcagct 121 tggcaaatgg gcttttcatt tcctgatcga aaaaaaaaac aaacctgtga ttaacaaggg 181 gaaattacct tcactgtgcc tattggcatc attccaagtt attcatgctt tagttcctag 241 ccattaactt aagatagaaa taagatcctg ccagttcact agttttcttg tcagtttgat 301 atatactttg atcttgtctt ttctggttgt tttccttaat tttgtctgtg ttgttctagt 361 gcttaattag ttgcctctca gttcttcaca ttctatgttt ttgagtaaaa ctctgtccat 421 atggccgttc tgttatgtat ctcagcaatc tgcttatatt tttttttttt gcatccccac 481 acaattctat ttgacgttgt aaaaaagaag agagatagct agataagcgc aactgatgct 541 ctatacttag tttcacggtt cttggtttaa tgcctaaaaa ttgtgcacta tcagtacttc 601 aattatgtta tctagtagtg ttttgtctcc tctgaataat gcctgccatt cttatgctgc 661 tctactgctg agaaaactac actatttgaa ttactgattg ctaattatgt ttcgattaac 721 agcataaagg aacattttgt tgatgttcta atggagtcaa aaggtggcaa aaagaagtct 781 agcagtagta gttccatgta cgaagctccc ctaggctaca agattgagga cgttcgccca 841 gccggaggaa tcaagaagtt ccagtctgct gcttactcca actgcgctcg caagccatcc 901 tgatattcct tcacatgcct ttccccgtag agtaggaatt tcctgcaatt tttcctttgt 961 tttgttgcaa taaatctccc ttggctggct gctttctcaa tctcttccct tgtcttctcc 1021 gatctcttct ttcctgtctt gtccactgct ccttgcaaca cttgatcaaa tgtcgatgtc 1081 cttggctgat tcttggggct ctgcccctgc ctcgcccatt gggtttgaag gctatgagaa 1141 gcgccttgag ataacattgt ctgatgcgcc cgtctttgtg gacccctgtg gtcgcggcct 1201 tcgtgccctc tcacgtgagc agatcgactc gttcttggat cttgcaaagt gtaccattgt 1261 atcccatctt tcgaacaagc acttcgactc atatgtgctt tcagagtcga gcctttttgt 1321 ttatccccac aaggttgttc tgaagacctg tggtacaaca aagcttctgc tctccattcc 1381 tcgcatcctt gagcttgctg cagagttgtc actgcctgtt ctatcagtga agtactctcg 1441 tgggatgttc atcttccctg gagcgcagcc gtcaccgcat cgcagcttct tggaggaggt 1501 ttctgtgctc aacagcttct ttggtggcct caagtcaggt ggcaatgctt atgtcattgg 1561 tgatgcattc aagcccgaga agaagtggca tgtctaatgt gccacagaag agcctgagca 1621 gcccatggtt acactcgaga tgtgcatgac tgggctggat gctaagaaag ctgaggtgtt 1681 cttcaaggat tccactgatg gctcctgctc atcagctaag gagatgacta tgttctctgg 1741 gatttctgaa atcatccctg agatggagat ttgtgacttt gagtttgacc cgtgtgggta 1801 ctcaatgaat ggcatttatg gtcccgccgt ctccacgatc catgtcactc ctgaggaagg 1861 tttcagctat gcaagctatg aagcaatgaa cttcaatcct agctccttgg tctacgatga 1921 tttgatcaag aaggtcctgg cttgtttctg cccttcagac ttttcggtcg ctgttaccat 1981 cttcggtggg catggttttg ccaaatcatg ggcaaaaggt gcagaggttg attcctacat 2041 gtgcgatgat cttgttgagc aagagcttcc tggtggcggt gtgctgatgt atcagagttt 2101 tactgctgtt actcctggtg ctgtgtcacc gaggtcgacc ttggatggct ggaacagcga 2161 tggagcagag atggttgcga agagcaaaga gatgagtgtc tgctgggaag gagagaaggc 2221 ggcgaagaag agagatgcag atgcctgaga aatcggcagt tcttcaacct caagttgcaa 2281 gtttgattca tctgaagttt ctgagacgcc ttatttggtt ctgctcttgc agtttcggtt 2341 aagcagctgg ctgggctacc ggcaaagcat atgttacttg ttcattgttc ttttatatct 2401 gtctgcccaa ataagtgctc tagatggttt gctgcgtctg ccatagtgag caattcagat 2461 tgtagtagaa ttcttatctg ttgccgatgc tctttaaggg agaatgatat gtaactcgat 2521 tattttcaat aactattgca acttcc //