LOCUS       AK100397                2546 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J023086M03, full insert
            sequence.
ACCESSION   AK100397
VERSION     AK100397.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 2546)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..2546
                     /clone="J023086M03"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..2546
                     /db_xref="Osa1:LOC_Os09g25620"
                     /note="(Rice Genome Annotation Project)
                     S-adenosylmethionine decarboxylase proenzyme, putative,
                     expressed"
                     /note="mapping to R09-TIGRv4S1-000409R (Chr.9: short
                     arm=15384721, long arm=15387366, direction=reverse) for
                     TIGR Pseudomol ver4"
BASE COUNT          563 a          558 c          578 g          847 t
ORIGIN      
        1 gtgtgtgcgc ccttgttgat tgctcttgtt tctgccaggt ttccttgtta ggctctagtt
       61 ttgctcgttg tttactgtaa attcccatgt atattaagtt tgtgcagtgc gctgtcagct
      121 tggcaaatgg gcttttcatt tcctgatcga aaaaaaaaac aaacctgtga ttaacaaggg
      181 gaaattacct tcactgtgcc tattggcatc attccaagtt attcatgctt tagttcctag
      241 ccattaactt aagatagaaa taagatcctg ccagttcact agttttcttg tcagtttgat
      301 atatactttg atcttgtctt ttctggttgt tttccttaat tttgtctgtg ttgttctagt
      361 gcttaattag ttgcctctca gttcttcaca ttctatgttt ttgagtaaaa ctctgtccat
      421 atggccgttc tgttatgtat ctcagcaatc tgcttatatt tttttttttt gcatccccac
      481 acaattctat ttgacgttgt aaaaaagaag agagatagct agataagcgc aactgatgct
      541 ctatacttag tttcacggtt cttggtttaa tgcctaaaaa ttgtgcacta tcagtacttc
      601 aattatgtta tctagtagtg ttttgtctcc tctgaataat gcctgccatt cttatgctgc
      661 tctactgctg agaaaactac actatttgaa ttactgattg ctaattatgt ttcgattaac
      721 agcataaagg aacattttgt tgatgttcta atggagtcaa aaggtggcaa aaagaagtct
      781 agcagtagta gttccatgta cgaagctccc ctaggctaca agattgagga cgttcgccca
      841 gccggaggaa tcaagaagtt ccagtctgct gcttactcca actgcgctcg caagccatcc
      901 tgatattcct tcacatgcct ttccccgtag agtaggaatt tcctgcaatt tttcctttgt
      961 tttgttgcaa taaatctccc ttggctggct gctttctcaa tctcttccct tgtcttctcc
     1021 gatctcttct ttcctgtctt gtccactgct ccttgcaaca cttgatcaaa tgtcgatgtc
     1081 cttggctgat tcttggggct ctgcccctgc ctcgcccatt gggtttgaag gctatgagaa
     1141 gcgccttgag ataacattgt ctgatgcgcc cgtctttgtg gacccctgtg gtcgcggcct
     1201 tcgtgccctc tcacgtgagc agatcgactc gttcttggat cttgcaaagt gtaccattgt
     1261 atcccatctt tcgaacaagc acttcgactc atatgtgctt tcagagtcga gcctttttgt
     1321 ttatccccac aaggttgttc tgaagacctg tggtacaaca aagcttctgc tctccattcc
     1381 tcgcatcctt gagcttgctg cagagttgtc actgcctgtt ctatcagtga agtactctcg
     1441 tgggatgttc atcttccctg gagcgcagcc gtcaccgcat cgcagcttct tggaggaggt
     1501 ttctgtgctc aacagcttct ttggtggcct caagtcaggt ggcaatgctt atgtcattgg
     1561 tgatgcattc aagcccgaga agaagtggca tgtctaatgt gccacagaag agcctgagca
     1621 gcccatggtt acactcgaga tgtgcatgac tgggctggat gctaagaaag ctgaggtgtt
     1681 cttcaaggat tccactgatg gctcctgctc atcagctaag gagatgacta tgttctctgg
     1741 gatttctgaa atcatccctg agatggagat ttgtgacttt gagtttgacc cgtgtgggta
     1801 ctcaatgaat ggcatttatg gtcccgccgt ctccacgatc catgtcactc ctgaggaagg
     1861 tttcagctat gcaagctatg aagcaatgaa cttcaatcct agctccttgg tctacgatga
     1921 tttgatcaag aaggtcctgg cttgtttctg cccttcagac ttttcggtcg ctgttaccat
     1981 cttcggtggg catggttttg ccaaatcatg ggcaaaaggt gcagaggttg attcctacat
     2041 gtgcgatgat cttgttgagc aagagcttcc tggtggcggt gtgctgatgt atcagagttt
     2101 tactgctgtt actcctggtg ctgtgtcacc gaggtcgacc ttggatggct ggaacagcga
     2161 tggagcagag atggttgcga agagcaaaga gatgagtgtc tgctgggaag gagagaaggc
     2221 ggcgaagaag agagatgcag atgcctgaga aatcggcagt tcttcaacct caagttgcaa
     2281 gtttgattca tctgaagttt ctgagacgcc ttatttggtt ctgctcttgc agtttcggtt
     2341 aagcagctgg ctgggctacc ggcaaagcat atgttacttg ttcattgttc ttttatatct
     2401 gtctgcccaa ataagtgctc tagatggttt gctgcgtctg ccatagtgag caattcagat
     2461 tgtagtagaa ttcttatctg ttgccgatgc tctttaaggg agaatgatat gtaactcgat
     2521 tattttcaat aactattgca acttcc
//