LOCUS       AK100374                2024 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J023084J22, full insert
            sequence.
ACCESSION   AK100374
VERSION     AK100374.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 2024)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..2024
                     /clone="J023084J22"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..2024
                     /db_xref="Osa1:LOC_Os01g54620"
                     /note="(Rice Genome Annotation Project) CESA4 - cellulose
                     synthase, expressed"
                     /note="mapping to R01-TIGRv4S1-001406F (Chr.1: short
                     arm=31753036, long arm=31755514, direction=forward) for
                     TIGR Pseudomol ver4"
BASE COUNT          447 a          511 c          515 g          551 t
ORIGIN      
        1 gtctatgttt cgagagagaa aagaccaggg taccaacacc acaagaaagc aggggccatg
       61 aacgctttgg ttcgagtatc cgcagttctg acaaatgccc cttacattct taatcttgac
      121 tgtgatcact atgttaacaa tagcaaagct gttcgtgaag cgatgtgttt catgatggac
      181 ccttctgttg gtagagatgt ctgctatgtc caattcccac aaaggttcga tggcattgat
      241 cgcagcgatc gttatgccaa taggaatgtt gtgttctttg acgttaacat gaaagggctt
      301 gatggcctcc aaggtccggt ttatgtggga actggttgtt gtttctatag gcaagcgctc
      361 tatggttatg gaccaccatc actgcctgcg cttccaaagt cttctgtctg ttcatggtgc
      421 tgctgctgct gtcctaagaa aaaagctgaa aaaagtgaga aagaaatgca tagagactct
      481 cgacgtgaag accttgagtc cgccattttc aatcttcggg aaattgacaa ctatgatgag
      541 tatgaacgct cgatgcttat ctcccagatg agctttgaga agtcgtttgg actgtcatca
      601 gtgttcatag aatcaactct tatggagaat ggaggcgttc ctgagtccgc aaacccatct
      661 acactgatca aagaggccat tcatgtcatt agctgtggat atgaagagaa aactgaatgg
      721 ggaaaagaga ttggctggat ctacggttca gtcacagagg atatcctgac tgggtttaag
      781 atgcactgcc gtggctggcg atccatctac tgcatgccga taagacccgc gttcaaggga
      841 tcagcgccaa tcaacctttc tgatcgtctc caccaggttc tccggtgggc tctcggttcc
      901 gttgagatct tcctcagccg gcactgccca ctctggtacg gctacggtgg tggtcgtctg
      961 aaatggctcc agagattgtc ctacatcaac accatcgtct acccgttcac ctctcttcct
     1021 cttattgcat actgttgcct gcccgccatt tgcctgctca caggcaaatt catcattccc
     1081 acgctctcca acgctgcaac catatggttt cttggcctct tcatctccat catcgtgacg
     1141 agcgtcctgg agctgcggtg gagtggcatc ggcatcgagg actggtggcg caacgagcag
     1201 ttctgggtca tcggtggcgt ctccgcccac ctcttcgccg tgttccaggg tatcctcaag
     1261 gtgattgctg ggctggacac caacttcacc gttacggcca aggcgacgga cgacaccgag
     1321 ttcggcgagc tgtacgtgtt caagtggacg acggtgctga tcccgccgac ctccatcctg
     1381 gtgctcaacc tcgtcggcgt ggtggccggg ttctccgacg cgctcaacag cggctacgag
     1441 tcctggggcc cgctcttcgg caaggtgttc ttcgccatgt gggtgatcat gcacttgtac
     1501 cccttcctca agggtctcat gggtcgccag aaccggacgc ccaccatcgt cgtgctctgg
     1561 tctgtcctgc tcgcctccgt cttctccctc ctctgggtca agatcgaccc gttcatcggc
     1621 agctccgaga ccaccaccac caacagctgc gccaacttcg actgctgagc gacatttgtg
     1681 ctccaggagc atcccgtttg gcggtgtttt gccggtattg caaatgtgtg tatctaatgc
     1741 gacgaagacg atgggtggtt tcctctctct gggctttgtc ctcgatctga gaggtgttgt
     1801 aggttagtac tccgcatgaa aatgttcatt gtattgttat tgtctgtgat ataagaagtt
     1861 ttgatgttga agccgctgaa actatgagag ggcaccgtta aatccgttta atcatacttg
     1921 tagaaaaaag agggggaaag aaaaggtttt cttcggtgaa cttgaaattg gactactgat
     1981 cagtttgtaa tgttatatga ctatatgcta ctgaatctta tctt
//