LOCUS AK100374 2024 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J023084J22, full insert sequence. ACCESSION AK100374 VERSION AK100374.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 2024) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..2024 /clone="J023084J22" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..2024 /db_xref="Osa1:LOC_Os01g54620" /note="(Rice Genome Annotation Project) CESA4 - cellulose synthase, expressed" /note="mapping to R01-TIGRv4S1-001406F (Chr.1: short arm=31753036, long arm=31755514, direction=forward) for TIGR Pseudomol ver4" BASE COUNT 447 a 511 c 515 g 551 t ORIGIN 1 gtctatgttt cgagagagaa aagaccaggg taccaacacc acaagaaagc aggggccatg 61 aacgctttgg ttcgagtatc cgcagttctg acaaatgccc cttacattct taatcttgac 121 tgtgatcact atgttaacaa tagcaaagct gttcgtgaag cgatgtgttt catgatggac 181 ccttctgttg gtagagatgt ctgctatgtc caattcccac aaaggttcga tggcattgat 241 cgcagcgatc gttatgccaa taggaatgtt gtgttctttg acgttaacat gaaagggctt 301 gatggcctcc aaggtccggt ttatgtggga actggttgtt gtttctatag gcaagcgctc 361 tatggttatg gaccaccatc actgcctgcg cttccaaagt cttctgtctg ttcatggtgc 421 tgctgctgct gtcctaagaa aaaagctgaa aaaagtgaga aagaaatgca tagagactct 481 cgacgtgaag accttgagtc cgccattttc aatcttcggg aaattgacaa ctatgatgag 541 tatgaacgct cgatgcttat ctcccagatg agctttgaga agtcgtttgg actgtcatca 601 gtgttcatag aatcaactct tatggagaat ggaggcgttc ctgagtccgc aaacccatct 661 acactgatca aagaggccat tcatgtcatt agctgtggat atgaagagaa aactgaatgg 721 ggaaaagaga ttggctggat ctacggttca gtcacagagg atatcctgac tgggtttaag 781 atgcactgcc gtggctggcg atccatctac tgcatgccga taagacccgc gttcaaggga 841 tcagcgccaa tcaacctttc tgatcgtctc caccaggttc tccggtgggc tctcggttcc 901 gttgagatct tcctcagccg gcactgccca ctctggtacg gctacggtgg tggtcgtctg 961 aaatggctcc agagattgtc ctacatcaac accatcgtct acccgttcac ctctcttcct 1021 cttattgcat actgttgcct gcccgccatt tgcctgctca caggcaaatt catcattccc 1081 acgctctcca acgctgcaac catatggttt cttggcctct tcatctccat catcgtgacg 1141 agcgtcctgg agctgcggtg gagtggcatc ggcatcgagg actggtggcg caacgagcag 1201 ttctgggtca tcggtggcgt ctccgcccac ctcttcgccg tgttccaggg tatcctcaag 1261 gtgattgctg ggctggacac caacttcacc gttacggcca aggcgacgga cgacaccgag 1321 ttcggcgagc tgtacgtgtt caagtggacg acggtgctga tcccgccgac ctccatcctg 1381 gtgctcaacc tcgtcggcgt ggtggccggg ttctccgacg cgctcaacag cggctacgag 1441 tcctggggcc cgctcttcgg caaggtgttc ttcgccatgt gggtgatcat gcacttgtac 1501 cccttcctca agggtctcat gggtcgccag aaccggacgc ccaccatcgt cgtgctctgg 1561 tctgtcctgc tcgcctccgt cttctccctc ctctgggtca agatcgaccc gttcatcggc 1621 agctccgaga ccaccaccac caacagctgc gccaacttcg actgctgagc gacatttgtg 1681 ctccaggagc atcccgtttg gcggtgtttt gccggtattg caaatgtgtg tatctaatgc 1741 gacgaagacg atgggtggtt tcctctctct gggctttgtc ctcgatctga gaggtgttgt 1801 aggttagtac tccgcatgaa aatgttcatt gtattgttat tgtctgtgat ataagaagtt 1861 ttgatgttga agccgctgaa actatgagag ggcaccgtta aatccgttta atcatacttg 1921 tagaaaaaag agggggaaag aaaaggtttt cttcggtgaa cttgaaattg gactactgat 1981 cagtttgtaa tgttatatga ctatatgcta ctgaatctta tctt //