LOCUS       AK100362                4061 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J023083M12, full insert
            sequence.
ACCESSION   AK100362
VERSION     AK100362.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 4061)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..4061
                     /clone="J023083M12"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..4061
                     /db_xref="Osa1:LOC_Os12g18729"
                     /note="(Rice Genome Annotation Project) expressed protein"
                     /note="mapping to R12-TIGRv4S1-000385F (Chr.12: short
                     arm=10819900, long arm=10823961, direction=forward) for
                     TIGR Pseudomol ver4"
BASE COUNT         1119 a          921 c          798 g         1223 t
ORIGIN      
        1 gtccaccact gctttccctc ctcctcatcc tcatcttcat ctctagacct catcttctcc
       61 agccaccacc gcctcccttc ccaccggtgg tggcagcggg aagacagcgg ctcggttgag
      121 cccggcgggg agggcacgat ttggtatggg aggagcagcg gcgactccat ccggcggtgg
      181 atccgccgcc tcctagtccc agctctctct cccccgatcc tcctcctccc cttcctccac
      241 cgccaccacc cacccctctc cctctctcag atctggtgcg cggggagcgg tggaggctac
      301 ggcggcggcg gcggcgagat cggtagcagt gatggtggag aggacggatc cgatggcggt
      361 ggttctcgtc aaccagttca aggacgacga cagcagcggc tgctgcaacg atggataggc
      421 tctgggcggc tcctccactc tcctcccctc tctcatatcc agtggctcgg ggtggtgggg
      481 cgtggccgac gcatccggcg gcggagctcg ggtatcgatc cggcatgttt ttttttctcc
      541 aaaatcaatt tttcttggtg gtcgggaaac ggattttcaa ttttcttgtt ttcgctcgaa
      601 tatctttttc gctggcggtc aacgtaactt aaccgcttgt gaaaacaagc tttaaagttt
      661 cgctagtgaa gattgttatt ttcacttgcc atttgtttgc gggcggctga cagtgccacc
      721 agcgaaaaac tcttttgcta gtagtgattg ctagatggtc agtagagaac ttgtggagca
      781 tatgactatc aactaacagt acacttcagc agaaagagga tggttctagc tctccgatgg
      841 tttaatattg aaacgtacag cccacccacc accaccccag tcgtccccag ctaagcgctc
      901 ccttgcttgc ctcagtagac gagctgccaa ctagtagcac tccagcaagc agcgggtcag
      961 cggagtccgg agggcgcacg tgcgccgcag cgaggtatca gcatggccag gcggcggctg
     1021 gctggccggc cgggttcggc aagcggctaa gcaggtaatt aagggactgc agatactgct
     1081 tgtgatcatc ccttaaaatt tcgtctttct tgtcttgggc caggtttaat tcctaatttt
     1141 ttcttcaaac tttcaacttt tccatcacat caaaactttt ctacacacac aaactttcaa
     1201 cttaattttc cgtcacatcg ttccaatttc aatcaaactt ctaattttag cgtgaactaa
     1261 acacaccctt ggttgtgact ctgggagtcg atacataggc cttaatgctc gtagtttgtg
     1321 gattttgggg taaactggcg tggaacttta cttggatacc acctgggagt tgatgtgatt
     1381 ttagtgttta gtacagttta gagtttatta cctaccggtt tcttggtgcc tggcgcacac
     1441 tgagcatgca aatgcagtga gagccagtat catctaagac ggctggacct gaaatatttt
     1501 accatgtata tatcaaactc gacttgatca ggtgtttagc ggaggaagga tcgatgtccg
     1561 gcgccggaca gagccgtggt catcgccttg gattacacat tgattcggat tggccagagg
     1621 tcttgttgat caatgactat gcggtgttca tggggtacct gtcgatggtt gtcaccggga
     1681 cggggttcct ggtgctcacg tggtccaccg tcatcctcct cggtggattc gtctccatgc
     1741 tatccaacaa ggacttctgg agtctcacgg tgatcacgct cgttcaaaca aggtgagcta
     1801 tctatagcca tctccaccag acttatattt atttcgcgtt cccaacatta accagttcag
     1861 ccaagcattt ggagtttcgc attgctagct agctactagt ttactgtcag atctagtgtt
     1921 gcgaaccgaa tatgctgcaa aacgttgcaa ttccagagtg gctttatata ctacattgat
     1981 atgaaaatat tcaagtccca tatttgcaaa atcaactatt tttaaaatcg aattattttc
     2041 tccccttttc aagaagcatg tattttgtat atttctctcc ccatttgata ataatttcat
     2101 caagaatttt aaaagagaat ataaccaata aagcacaaat gtcatgattt catgattgtg
     2161 acatgtaata atcacttctt ttttaatttt tattttaatt ttctgaaatt tttttgagag
     2221 ctttgaagtg tacctaaagc aatgcaattc atggtcatat gttgcaagac aaatgagata
     2281 aattcatcaa ctagttaaca agcatgcatt agagtataaa catgaatcaa aggtattaca
     2341 attaagctca aatctctact attataaaaa ttgaagatgt ttttgccggt ggcttggtaa
     2401 gtcgtcatgt ccgaattagc ctcgcacata attactgcca atttaattat ttatgtgccc
     2461 cacatgtatg agctttaaac attagatttt ccataagaaa atttgcttgt tcggatcagt
     2521 gcctttggcc gattgcgttt catcctgtgc attgtcacga accaaccacc accgcgaggt
     2581 tgtcatcttg ctgatacggt ctgttcggca acacggtttg ggacctgctg tcgtgcacct
     2641 atatcaacac caaccagcag cagtcaggtg tgttgccgtg cgccgaggca agcagcacga
     2701 cgtaccattg ttgattattc tctacacgca cacaccgtat cgagaagaat tcctactgtg
     2761 ttcatcagaa actcaatcca atattgtcta ctgtgtatac gtgttccaaa aagattaaag
     2821 aaaagatcag gatcgatatc aaagccgaga tctattacta cccacatatc gaaaatccac
     2881 gcgtgcagca agacgatcag caacagcagc cgatcgatga cggttgccaa gagaaatacg
     2941 aaaacctaat cagagaaata ttcaatcaag ctactgcgca catatatctt tacctcttaa
     3001 attatatttc tatctctact attataaaaa ttgtagatgt tttcgtcagt attttagtac
     3061 gtcatccgcg tatgagtcgg tttttaagtc cgtttgattt tggaaataca aatccgtatt
     3121 tgagtcagtt tttaagttcg ttcgcttttg gaaatacaga agaaatcgta taagaaatct
     3181 ctttaaaaac tcacatacta ctaacttgag acgttcggac acctaattac agctcatgat
     3241 tttctaacac aatatatatc caagcgaatt tgacacagtg aatttcatct taactcgata
     3301 taatataata agattaaaat aatcttcacc cgttgcaaca cacgggcatt ttttctagtc
     3361 aataataaag ataatgattt caaacgattt ataatgcaac atattcacaa gtacataggt
     3421 tgaaaaaaaa tccctatata tatatatata cctattgcat catcactctt tctcaaaata
     3481 acttcttcac aaaaataacc aagagaattt tcaacaagta ttagagcttt ttgtgctcat
     3541 tttgacattg ataataaaat atctcaattt atttcgagta cgtccgtgtc gttaagaatg
     3601 ttctaaggat ttggtaccca ttattttcct tactgtaaat acggctttat cgtcaatact
     3661 gtttccaagg attctgtatt catttttttt ctctcatcat aagcaacttt ttattctcct
     3721 gtgacatttg gaataaacaa taagcaattt gaggaataac aatccaataa gtataaatat
     3781 aagcattaat catccaaact cagcacttgc tttaacattg catatttact taaatcaagt
     3841 aaaagaatta gtgtcatgca tcatctcact taaaagtaat atccaagcca catgaaaaga
     3901 ctaaaatgca tacaagctaa catatcaaca aatatacatc aattatttta ctagcatgca
     3961 caagaatata ctagaggtat ataccaaagc tcttcttttt ctcatttttt tctttatttt
     4021 cagatttaga gcaatgcatg gatatagaca tgaatgcacc g
//