LOCUS AK100362 4061 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J023083M12, full insert sequence. ACCESSION AK100362 VERSION AK100362.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 4061) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..4061 /clone="J023083M12" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..4061 /db_xref="Osa1:LOC_Os12g18729" /note="(Rice Genome Annotation Project) expressed protein" /note="mapping to R12-TIGRv4S1-000385F (Chr.12: short arm=10819900, long arm=10823961, direction=forward) for TIGR Pseudomol ver4" BASE COUNT 1119 a 921 c 798 g 1223 t ORIGIN 1 gtccaccact gctttccctc ctcctcatcc tcatcttcat ctctagacct catcttctcc 61 agccaccacc gcctcccttc ccaccggtgg tggcagcggg aagacagcgg ctcggttgag 121 cccggcgggg agggcacgat ttggtatggg aggagcagcg gcgactccat ccggcggtgg 181 atccgccgcc tcctagtccc agctctctct cccccgatcc tcctcctccc cttcctccac 241 cgccaccacc cacccctctc cctctctcag atctggtgcg cggggagcgg tggaggctac 301 ggcggcggcg gcggcgagat cggtagcagt gatggtggag aggacggatc cgatggcggt 361 ggttctcgtc aaccagttca aggacgacga cagcagcggc tgctgcaacg atggataggc 421 tctgggcggc tcctccactc tcctcccctc tctcatatcc agtggctcgg ggtggtgggg 481 cgtggccgac gcatccggcg gcggagctcg ggtatcgatc cggcatgttt ttttttctcc 541 aaaatcaatt tttcttggtg gtcgggaaac ggattttcaa ttttcttgtt ttcgctcgaa 601 tatctttttc gctggcggtc aacgtaactt aaccgcttgt gaaaacaagc tttaaagttt 661 cgctagtgaa gattgttatt ttcacttgcc atttgtttgc gggcggctga cagtgccacc 721 agcgaaaaac tcttttgcta gtagtgattg ctagatggtc agtagagaac ttgtggagca 781 tatgactatc aactaacagt acacttcagc agaaagagga tggttctagc tctccgatgg 841 tttaatattg aaacgtacag cccacccacc accaccccag tcgtccccag ctaagcgctc 901 ccttgcttgc ctcagtagac gagctgccaa ctagtagcac tccagcaagc agcgggtcag 961 cggagtccgg agggcgcacg tgcgccgcag cgaggtatca gcatggccag gcggcggctg 1021 gctggccggc cgggttcggc aagcggctaa gcaggtaatt aagggactgc agatactgct 1081 tgtgatcatc ccttaaaatt tcgtctttct tgtcttgggc caggtttaat tcctaatttt 1141 ttcttcaaac tttcaacttt tccatcacat caaaactttt ctacacacac aaactttcaa 1201 cttaattttc cgtcacatcg ttccaatttc aatcaaactt ctaattttag cgtgaactaa 1261 acacaccctt ggttgtgact ctgggagtcg atacataggc cttaatgctc gtagtttgtg 1321 gattttgggg taaactggcg tggaacttta cttggatacc acctgggagt tgatgtgatt 1381 ttagtgttta gtacagttta gagtttatta cctaccggtt tcttggtgcc tggcgcacac 1441 tgagcatgca aatgcagtga gagccagtat catctaagac ggctggacct gaaatatttt 1501 accatgtata tatcaaactc gacttgatca ggtgtttagc ggaggaagga tcgatgtccg 1561 gcgccggaca gagccgtggt catcgccttg gattacacat tgattcggat tggccagagg 1621 tcttgttgat caatgactat gcggtgttca tggggtacct gtcgatggtt gtcaccggga 1681 cggggttcct ggtgctcacg tggtccaccg tcatcctcct cggtggattc gtctccatgc 1741 tatccaacaa ggacttctgg agtctcacgg tgatcacgct cgttcaaaca aggtgagcta 1801 tctatagcca tctccaccag acttatattt atttcgcgtt cccaacatta accagttcag 1861 ccaagcattt ggagtttcgc attgctagct agctactagt ttactgtcag atctagtgtt 1921 gcgaaccgaa tatgctgcaa aacgttgcaa ttccagagtg gctttatata ctacattgat 1981 atgaaaatat tcaagtccca tatttgcaaa atcaactatt tttaaaatcg aattattttc 2041 tccccttttc aagaagcatg tattttgtat atttctctcc ccatttgata ataatttcat 2101 caagaatttt aaaagagaat ataaccaata aagcacaaat gtcatgattt catgattgtg 2161 acatgtaata atcacttctt ttttaatttt tattttaatt ttctgaaatt tttttgagag 2221 ctttgaagtg tacctaaagc aatgcaattc atggtcatat gttgcaagac aaatgagata 2281 aattcatcaa ctagttaaca agcatgcatt agagtataaa catgaatcaa aggtattaca 2341 attaagctca aatctctact attataaaaa ttgaagatgt ttttgccggt ggcttggtaa 2401 gtcgtcatgt ccgaattagc ctcgcacata attactgcca atttaattat ttatgtgccc 2461 cacatgtatg agctttaaac attagatttt ccataagaaa atttgcttgt tcggatcagt 2521 gcctttggcc gattgcgttt catcctgtgc attgtcacga accaaccacc accgcgaggt 2581 tgtcatcttg ctgatacggt ctgttcggca acacggtttg ggacctgctg tcgtgcacct 2641 atatcaacac caaccagcag cagtcaggtg tgttgccgtg cgccgaggca agcagcacga 2701 cgtaccattg ttgattattc tctacacgca cacaccgtat cgagaagaat tcctactgtg 2761 ttcatcagaa actcaatcca atattgtcta ctgtgtatac gtgttccaaa aagattaaag 2821 aaaagatcag gatcgatatc aaagccgaga tctattacta cccacatatc gaaaatccac 2881 gcgtgcagca agacgatcag caacagcagc cgatcgatga cggttgccaa gagaaatacg 2941 aaaacctaat cagagaaata ttcaatcaag ctactgcgca catatatctt tacctcttaa 3001 attatatttc tatctctact attataaaaa ttgtagatgt tttcgtcagt attttagtac 3061 gtcatccgcg tatgagtcgg tttttaagtc cgtttgattt tggaaataca aatccgtatt 3121 tgagtcagtt tttaagttcg ttcgcttttg gaaatacaga agaaatcgta taagaaatct 3181 ctttaaaaac tcacatacta ctaacttgag acgttcggac acctaattac agctcatgat 3241 tttctaacac aatatatatc caagcgaatt tgacacagtg aatttcatct taactcgata 3301 taatataata agattaaaat aatcttcacc cgttgcaaca cacgggcatt ttttctagtc 3361 aataataaag ataatgattt caaacgattt ataatgcaac atattcacaa gtacataggt 3421 tgaaaaaaaa tccctatata tatatatata cctattgcat catcactctt tctcaaaata 3481 acttcttcac aaaaataacc aagagaattt tcaacaagta ttagagcttt ttgtgctcat 3541 tttgacattg ataataaaat atctcaattt atttcgagta cgtccgtgtc gttaagaatg 3601 ttctaaggat ttggtaccca ttattttcct tactgtaaat acggctttat cgtcaatact 3661 gtttccaagg attctgtatt catttttttt ctctcatcat aagcaacttt ttattctcct 3721 gtgacatttg gaataaacaa taagcaattt gaggaataac aatccaataa gtataaatat 3781 aagcattaat catccaaact cagcacttgc tttaacattg catatttact taaatcaagt 3841 aaaagaatta gtgtcatgca tcatctcact taaaagtaat atccaagcca catgaaaaga 3901 ctaaaatgca tacaagctaa catatcaaca aatatacatc aattatttta ctagcatgca 3961 caagaatata ctagaggtat ataccaaagc tcttcttttt ctcatttttt tctttatttt 4021 cagatttaga gcaatgcatg gatatagaca tgaatgcacc g //